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Tomato Seed Borne Ralstonia solanacearum in Bangladesh

  • PLANT GROWING, PLANT PROTECTION AND BIOTECHNOLOGY
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Abstract

Genetic diversity of Ralstonia solanacearum, on seeds of tomato from different seed sources in Bangladesh was studied by using Random amplified polymorphic DNA (RAPD) markers. The primers viz., OPA02, OPA08, OPA09, OPA10, OPA18 and OPE19 were tested in this experiment and were also evaluated on the basis of intensity and resolution of the band. Of these, the specific marker (OPA18) of RAPD in molecular characterisation of R. solanacearum produced distinct twenty bands with 100% polymorphism at base pair of 100–2000. Segregation of isolates of R. solanacearum was determined in unweighted pair group method with arithmetic means. In cluster analysis, isolate of Metal seed company Ltd. was very near with United seed company limited and Mallika seed company with the least genetic distance. Metal seed company Ltd. was also close to Lal Teer seed company Ltd. with lower genetic distance (0.1625). Coefficient of gene differentiation (1.0000) in R. solanacearum marked high genetic variations indicating adequate polymorphism. The highest (1.204) genetic distance was found in Namdhari seed company limited vs. Bangladesh Institute of Nuclear Agriculture (BINA). Moreover genetic identity was obtained as higher (0.8500) in United seed company limited vs. Metal seed company Ltd., and the lowest genetic identity (0.3000) was noted in BINA vs. Namdhari seed company limited. Banding pattern, gene differentiation, genetic distance and genetic identity showed the distinct genetic variations which were associated with each isolate of R. solanacearum.

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REFERENCES

  1. Mansfield, J., Genin, S., Magori, S., Citovsky, V., Sriariyanum, M., and Ronald, P., et al., Top 10 plant pathogenic bacteria in molecular plant pathology, Mol. Plant Pathol., 2012, vol. 13, pp. 614–629.

    Article  Google Scholar 

  2. Yabuuchi, E., Kosako, Y., Yano, I., Hotta, H., and Nishiuchi, Y., Transfer of two burkholderia and an alcaligenes species to Ralstonia gen. nov.: Proposal of Ralstonia pickettii (Ralston, Palleroni and Doudoroff 1973) comb. nov., Ralstonia solanacearum (Smith 1896) comb. nov. and Ralstonia eutropha (Davis 1969) comb. nov., Microb. Immun., 1995, vol. 39, pp. 897–904.

    Article  CAS  Google Scholar 

  3. Hayward, A.C., The hosts of Pseudomonas solanacearum, in Bacterial Wilt, the Disease and Its Causative Agent, Pseudomonas solanacearum, Hayward, A.C. and Hartman, G.L., Eds., Wallingford, UK: CAB Int., 1994, pp. 9–25.

    Google Scholar 

  4. Fegan, M. and Prior, P., How complex is the Ralstonia solanacearum species complex?, in Bacterial Wilt: The Disease and the Ralstonia solanacearum Species Complex, Allen, C., Prior, P., and Hayward, A.C., Eds., St Paul, MN: APS Press, 2005, pp. 449–461.

    Google Scholar 

  5. Ramesh, R., Achari, G.A., and Gaitonde, S., Genetic diversity of Ralstonia solanacearum infecting solanaceous vegetables from India reveals the existence of unknown or newer sequevars of Phylotype I strains, Eur. J. Plant Pathol., 2014, vol. 140, pp. 543–562.

    Article  CAS  Google Scholar 

  6. Roy, C. and Sansonetti, P., Host-microbe interactions: Bacteria host- pathogen interactions: Interpreting the dialogue, Curr. Opin. Microb., 2004, vol. 7, pp. 1–3.

    Article  Google Scholar 

  7. McGee, D.C., Epidemiology approach to disease management through seed technology, Ann. Rev. Phytopathol., 1995, vol. 33, pp. 445–466.

    Article  CAS  Google Scholar 

  8. Vanitha, S.C., Niranjana, S.R., Mortensen, C.N., and Umesha, S., Bacterial wilt of tomato in Karnataka and its management by Pseudomonas fluorescens, Bio Control, 2009, vol. 54, pp. 685–695.

    Google Scholar 

  9. Popoola, A.R., Ganiyu, S.A., Enikuomehin, O.A., Bodunde, J.G., Adedibu, O.B., Durosomo, H.A., and Karunwi, O. A., Isolation and characterization of Ralstonia solanacearum causing bacterial wilt of tomato in Nigeria, Nigerian J. Biotech., 2015, vol. 29, pp. 1–10.

    Article  Google Scholar 

  10. Hanson, P.M., Wang, J.-F., Lucardo, O., Hanudin, S.Y.M., Hartman, G.L., Lin, Y.C., and Chen, J.T., Variable reactions of tomato lines to bacterial wilt evaluated at several locations in South-East Asia, Hortic. Sci., 1996, vol. 31, pp. 143–146.

    Google Scholar 

  11. Williams, J.G.K., Kubelik, A.R., Livak, K.J., Rafalski, J.A., and Tingey, S.V., DNA polymorphisms amplified by arbitrary primers are useful as generic markers, Nucl. Acids Res., 1990, vol. 18, no. 22, pp. 6531–6535.

    Article  CAS  Google Scholar 

  12. Grover, A., Azmi, W., Gadewar, A.V., Pattanayak, D., Naik, P.S., Shekhawat, G.S., and Chakrabarti, S.K., Genotypic diversity in a localized population of Ralstonia solanacearum as revealed by random amplified polymorphic DNA markers, J. App. Microb., 2006, vol. 101, no. 4, pp. 798–806.

    Article  CAS  Google Scholar 

  13. Singh, D., Sinha, S., Chaudhary, G., Yadav, D.K., and Mondal, K.K., Genetic diversity of biovar 3 and 4 of Ralstonia solanacearum causing bacterial wilt of tomato using BOX- PCR, RAPD and hrp gene sequences, Indian J. Agric. Sci., 2014, vol. 84, no. 3, pp. 391–395.

    CAS  Google Scholar 

  14. Sumangala, K., Lingaraju, S., Hegde, Y.R., and Byadagi, A.S., Genetic diversity of Ralstonia solanacaerum from major tomato growing areas of Karnataka, Int. J. Plant Prot., 2012, vol. 5, no. 2, pp. 324–328.

    Google Scholar 

  15. Kelman, A., The relationship of pathogenicity in Pseudomonas solanacearum to colony appearance on a tetrazolium medium, Phytopathology, 1954, vol. 44, pp. 693–695.

    Google Scholar 

  16. Kovacs, N., Identification of Pseudomonas pyocyanea by the oxidase reaction, Nature, 1956, vol. 178, p. 703.

    Article  CAS  Google Scholar 

  17. Lelliott, R.A. and Stead, D.E., Methods for the diagnosis of bacterial diseases of plants, in Methods in Plant Pathology, Preece, T.F., Ed., London, UK: Blackwell Sci. Press, 1987, vol. 2.

    Google Scholar 

  18. Kiraly, Z., Methods in Plant Pathology, Budapest: Akad. Kiado, 1970.

    Google Scholar 

  19. Klement, Z., Rapid detection of the pathogenicity of phytopathogenic pseudomonads, Nature, 1963, vol. 199, pp. 299–300.

    Article  CAS  Google Scholar 

  20. Ausubel, F. M., Brent, R., and Kingston, R.E., et al., Current Protocols in Molecular Biology, New York: John Wiley & Sons, Inc., 1987.

    Google Scholar 

  21. Khayamie, S., Niknejad, K.N., Rabie, B., Sassanie, S., and Ebadie, A.A., Genetic characterization of Pseudomonas syringae pv. syringae strains from stone fruits based on RAPD analysis in Iran, Agric. Trop. Subtrop., 2009, vol. 42, no. 4, pp. 162–166.

    Google Scholar 

  22. Nei, M., Analysis of gene diversity in subdivided populations, Proc. Natl. Acad. Sci. U.S.A., 1973, vol. 70, no. 12, pp. 3321–3323.

    Article  CAS  Google Scholar 

  23. Yeh, F.C., Yang, R.C., and Boyle, T., POPGENE 32-Version 1.31. Population Genetics Software, 1999.

    Google Scholar 

  24. Sharma, N. and Sharma, D.K., Incidence and seed transmission of Ralstonia solanaceurm (Smith) in brinjal (Solanum melongena L.) seeds, Int. J. Plant Pathol., 2014, vol. 5, no. 2, pp. 63–69.

    Article  Google Scholar 

  25. Sharma, D.K. and Agrawal, K., Incidence and histopathology of Ralstonia solanaceurm in tomato seeds, J. Mycol. Plant Pathol., 2010, vol. 40, no. 1, pp. 115–119.

    Google Scholar 

  26. Kumar, S., Kedar, N., Hamsaveni, N., Gowda, P.H.R., Rohini, I.B., Rangaswamy, K.T., and Achari, R., Isolation and characterization of Ralstonia solanacearum causing bacterial wilt of Solanaceae crops, Int. J. Curr. Microb. Appl. Sci., 2017, vol. 6, no. 5, pp. 1173–1190.

    Article  CAS  Google Scholar 

  27. Perez, A.S., Mejia, L., Fegan, M., and Allen, C., Diversity and distribution of Ralstonia solanacearum strains in Guatemala and rare occurrence of tomato fruit infection, Plant Pathol., 2008, vol. 57, no. 2, pp. 320–331.

    Article  Google Scholar 

  28. Ramsubhag, A., Lawrence, D., Cassie, D., Fraser, R., Umaharan, P., Prior, P., and Wicker, E., Wide genetic diversity of Ralstonia solanacearum strains affecting tomato in Trinidad, West Indies, Plant Pathol., 2012, vol. 61, no. 5, pp. 844–857.

    Article  Google Scholar 

  29. Jeong, Y., Kim, J., Kang, Y., Lee, S., and Hwang, I., Genetic diversity and distribution of Korean isolates of Ralstonia solanacearum, Plant Dis., 2007, vol. 91, no. 10, pp. 1277–1287.

    Article  CAS  Google Scholar 

  30. Nishat, S., Hamim, I., Khalil, M.I., Ali, M.A., Hossain, M.A., Meah, M.B., and Islam, M.R., Genetic diversity of the bacterial wilt pathogen Ralstonia solanacearuma using a RAPD marker, Comp. Ren. Biol., 2015, vol. 338, no. 11, pp. 757–767.

    Article  Google Scholar 

  31. Dey, P., Hossain, I., Hossain, M.D., Mahmud, H., and Dey, S.K., Assessment of genetic diversity of seed borne Ralstonia solanacearuma of eggplant in Bangladesh, J. Plant Physiol. Pathol., 2020, vol. 8, no. 1, pp. 1–7.

    Google Scholar 

  32. Castillo, J.A. and Greenberg, J.T., Evolutionary dynamics of Ralstonia solanacearuma, Appl. Environ. Microb., 2007, vol. 73, no. 4, pp. 1225–1238.

    Article  CAS  Google Scholar 

Download references

ACKNOWLEDGMENTS

The authors acknowledge the financial support and scholarship granted by the Bangabandhu fellowship on Science, Information and Communication Technology, Ministry of Science and Technology, Dhaka and also acknowledge the Professor Golam Ali Fakir Seed Pathology Centre and Molecular Plant Pathology Laboratory, Department of Plant Pathology, Bangladesh Agricultural University, Mymensingh to provide laboratory facilities.

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Correspondence to Hyat Mahmud.

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The authors declare that they have no conflicts of interest. This article does not contain any studies involving animals or human participants performed by any of the authors.

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Purnima Dey, Hossain, I., Mahmud, H. et al. Tomato Seed Borne Ralstonia solanacearum in Bangladesh. Russ. Agricult. Sci. 47, 386–393 (2021). https://doi.org/10.3103/S1068367421040157

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