Skip to main content
Log in

Neuronal topology as set of braids: Information processing, transformation and dynamics

  • Published:
Optical Memory and Neural Networks Aims and scope Submit manuscript

Abstract

Spatial characteristics of brain matter affect dynamics of informational flow. It seems important to investigate into the topology of neural information to better understand biological neural nets as well as for their computer science analogs. Mathematical braids are proposed as tool for modeling the neuronal topology. Neurological basis of neuronal path is reviewed. We demonstrate mathematical algorithms for path description and transformation. A simulation environment for neural braid construction and transformation is implemented. Experimental evaluation of 1310719 braid-defined neural topologies illustrates how neural path intersections affect information processing and memory recall. The mathematical representation of synaptic pruning is proposed. Pruning of neural nets shows the applicability of the approach to the simplification of neural graphs for computational resource saving.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Bhambhani, V., Valbuena-Reyes, L., and Tanner, H., Spatially distributed cellular neural networks, Int. J. Intelligent Comput. Cybernetics, 2011, vol. 4, no. 4, pp. 465–486.

    Article  MathSciNet  Google Scholar 

  2. Sporns, O., Structure and function of complex brain networks, Dialogues Clin. Neurosci., 2013, vol. 15, no. 3, pp. 247–262.

    Google Scholar 

  3. Coddington, L.T., Nietz, A.K., and Wadiche, J.I., The contribution of extrasynaptic signaling to cerebellar information processing, Cerebellum, 2014, vol. 13, no. 4, pp. 513–520.

    Article  Google Scholar 

  4. Hebb, D., The Organization of Behavior: A Neurophysiological Theory, New York: Wiley, 1949.

    Google Scholar 

  5. Yoder, J. and Yaeger, L., Evaluating topological models of neuromodulation in polyworld, in Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems, Cambridge, MA: MIT Press, 2014, pp. 916–923.

    Google Scholar 

  6. Kassel, C. and Turaev, V., Braid Groups, Graduate Texts in Mathematics, 2007.

    MATH  Google Scholar 

  7. Tower, D.B., Structural and functional organization of mammalian cerebral cortex: The correlation of neurone density with brain size, Cortical neurone density in the fin whale (Balaenoptera Physalus L.) with a note on the cortical neuronedensity in the Indian elephant, J. Comp. Neurol., 1954, vol. 101, pp. 19–51.

    Article  Google Scholar 

  8. Tonegawa, S., Liu, X., Ramirez, S., and Redondo, R., Memory engram cells have come of age, Neuron, 2015, vol. 87, no. 5, pp. 918–931.

    Article  Google Scholar 

  9. Josselyn, S.A., Kohler, S., and Frankland, P.W., Finding the engram, Nat. Rev. Neurosci., 2015, vol. 16, pp. 521–534.

    Article  Google Scholar 

  10. Izhikevich, E.M., Polychronization: Computation with spikes, Neural Comput., 2006, vol. 18, pp. 245–282.

    Article  MathSciNet  MATH  Google Scholar 

  11. Fernando, C., Vasas, V., Szathmáry, E., and Husbands, P., Evolvable neuronal paths: A novel basis for information and search in the brain, PLoS ONE, 2011, vol. 6, no. 8, p. e23534.

    Article  Google Scholar 

  12. De-Miguel, F.F. and Fuxe, K., Extrasynaptic neurotransmission as a way of modulating neuronal functions, Front. Physio., 2012, vol. 3, p. 16.

    Article  Google Scholar 

  13. Chistopolsky, I.A., Vorontsov, D.D., and Sakharov, D.A., Monitoring of neuroactive factors released from a pattern-generating network, Acta Biol. Hungarica, 2008, vol. 59, pp. 29–31.

    Article  Google Scholar 

  14. Staras, K., Kemenes, G., and Benjamin, P.R., Pattern-generating role for motoneurons in a rhythmically active neuronal network, J. Neurosci., 1998, vol. 18, pp. 3669–3688.

    Google Scholar 

  15. De Pittà, M., Volman, V., Berry, H., and Ben-Jacob, E., A tale of two stories: Astrocyte regulation of synaptic depression and facilitation, PLoS Comput Biol., 2011, vol. 7, no. 12, p. e1002293.

    Article  Google Scholar 

  16. Schafer, D.P., Lehrman, E.K., Kautzman, A.G., Koyama, R., Mardinly, A.R., Yamasaki, R., Ransohoff, R.M., Greenberg, M.E., Barres, B.A., and Stevens, B., Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner, Neuron, 2012, vol. 74, no. 4, pp. 691–705.

    Article  Google Scholar 

  17. Chechik, G., Meilijson, I., and Ruppin, E., Synaptic pruning in development: A computational account, Neural Computation, 1998, vol. 10, no. 7, pp. 1759–1777.

    Article  Google Scholar 

  18. Sossinsky, A., Knots, Mathematics with a Twist, Harvard University Press, 2002.

    MATH  Google Scholar 

  19. Dehornoy, P., Efficient solutions to the braid isotopy problem, Disc. Appl. Math, 2008, vol. 156, pp. 3094–3112.

    Article  MathSciNet  MATH  Google Scholar 

  20. Dehornoy, P., A fast method for comparing braids, Adv. Math., 1997, vol. 125, pp. 200–235.

    Article  MathSciNet  MATH  Google Scholar 

  21. Dehornoy, P., Dynnikov, I., Rolfsen, D., and Wiest, B., Why are braids orderable? Panoramas et Synthèses, Soc. Math., 2002, vol. 14.

    Google Scholar 

  22. Balaban, P.M., Cellular mechanisms of behavioral plasticity in terrestrial snail, Neurosci. Biobehav. Rev., 2002, vol. 26, no. 5, pp. 597–630.

    Article  Google Scholar 

  23. Herrmann, A. and Gertner, W., Noise and the PSTH response to current transients, I: General theory and application to the integrate-and-fire neuron, J. Comput. Neurosci., 2001, vol. 11, pp. 135–151.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to O. Lukyanova.

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Lukyanova, O., Nikitin, O. Neuronal topology as set of braids: Information processing, transformation and dynamics. Opt. Mem. Neural Networks 26, 172–181 (2017). https://doi.org/10.3103/S1060992X17030043

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.3103/S1060992X17030043

Keywords

Navigation