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Estimating Genetic Diversity of Silver (Hypophthalmichthys molitrix Val.) and Bighead (Hypophthalmichthys nobilis Rich.) Carps Grown in Aquaculture in the Republic of Belarus Based on Polymorphism of Microsatellite Loci

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Abstract

In this work, the genetic diversity of silver (Hypophthalmichthys molitrix Val.) and bighead (Hypophthalmichthys nobilis Rich.) carps bred on the territory of the Republic of Belarus was estimated according to genotyping of 11 STR loci (Hmo11, Hmo13, Hmo15, Hmo25, Hmo26, Hmo31, Hmo33, Hmo34, Hmo36, Hmo37, Hmo40). The following indices were calculated: average number of alleles per locus, effective number of alleles, levels of expected and observed heterozygosity, Shannon’s information index value, and FIS fixation index. The results obtained indicate a moderate (for bighead carp) and sufficiently high (for silver carp) genetic diversity of the studied samples, up to the possibility to allocate several groups for subsequent work on obtaining linear material and further reproduction. To achieve these goals, special attention should be paid to the selection of pairs of producers taking into account the results of molecular-genetic analysis. The estimation of genetic diversity of these species of herbivorous fishes bred in the Republic of Belarus as compared with the results of other studies indicates a significant genetic resource of domestic producers.

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REFERENCES

  1. Contributing to Food Security and Nutrition for All: the State of World Fisheries and Aquaculture, Rome: Food and Agriculture Organization of the United Nations, 2016.

  2. Li, S.F., Xu, J.W., Yang, Q.L., Wang, C.H., Chen, Q., Chapman, D.C., and Lu, G., A comparison of complete mitochondrial genomes of silver carp Hypophthalmichthys molitrix and bighead carp Hypophthalmichthys nobilis: implications for their taxonomic relationship and phylogeny, J. Fish Biol., 2009, vol. 74, no. 8, pp. 1787–1803. https://doi.org/10.1111/j.1095-8649.2009.02258.x

    Article  CAS  PubMed  Google Scholar 

  3. Gheyas, A.A., Woolliam, J.A., Taggart, J.B., Sattar, M.A., Das, T.K., McAndrew, B.J., and Penman, D.J., Heritability estimation of silver carp (Hypophthalmichthys molitrix) harvest traits using microsatellite based parentage assignment, Aquaculture, 2009, vol. 294, no. 3–4, pp. 187–193. /https://doi.org/10.1016/j.aquaculture.2009.06.013

    Article  CAS  Google Scholar 

  4. Wang, J., Yang, G., and Zhou, G., Quantitative trait loci for morphometric body measurements of the hybrids of silver carp (Hypophthalmichthys molitrix) and bighead carp (H. nobilis), Acta Biol. Hung., 2013, vol. 64, no. 2, pp. 169–183. https://doi.org/10.1556/ABiol.64.2013.2.4

    Article  CAS  PubMed  Google Scholar 

  5. Zhu, C., Tong, J., Yu, X., Guo, W., Wang, X., Liu, H., Feng, X., Sun, Y., Liu, L., and Fu, B., A second-generation genetic linkage map for bighead carp (Aristichthys nobilis) based on microsatellite markers, Anim. Genet., 2014, vol. 45, no. 5, pp. 699–708. https://doi.org/10.1111/age.12194

    Article  CAS  PubMed  Google Scholar 

  6. Vlasov, V.A., Maslova, N.I., and Pavlov, A.D., Conservation and restoration of the gene pool of fishes of aquaculture of Russia, Izv. Timiryaz. S.-Kh.Akad., 2012, vol. 5, pp. 83–92.

    Google Scholar 

  7. Chen, Q., Wang, C., Lu, G., Zhao, J., Chapman, D.C., Zsigmond, J., and Li, S., Microsatellite genetic diversity and differentiation of native and introduced grass carp populations in three continents, Genetica, 2012, vol. 140, nos. 4–6, pp. 115–123. https://doi.org/10.1007/s10709-012-9663-8

    Article  PubMed  Google Scholar 

  8. Fedorova, N.N. and Zalepuhin, V.V., Some diagnostic aspects of the endogenous different quality concept, Vestn. Astrakhan. Gos. Tekhn. Univ., 2007, vol. 3, pp. 51–54.

    Google Scholar 

  9. Mia, M.Y., Taggart, J.B., Gilmour, A.E., Gheyas, A.A., Das, T.K., Kohinoor, A.H.M., Rahman, M.A., Sattar, M.A., Hussaina, M.G., Mazid, M.A., Penman, D.J., and McAndrew, B.J., Detection of hybridization between Chinese carp species (Hypophthalmichthys molitrix and Aristichthys nobilis) in hatchery broodstock in Bangladesh, using DNA microsatellite loci, Aquaculture, 2005, vol. 247, nos 1-4, pp. 267–273. https://doi.org/10.1016/j.aquaculture.2005.02.018

    Article  CAS  Google Scholar 

  10. Gheyas, A.A., Cairney, M., Gilmour, A.E., and Sattar, M.A., Characterization of microsatellite loci in silver carp (Hypophthalmichthys molitrix), and cross-amplification in other cyprinid species, Mol. Ecol. Not., 2006, vol. 6, no. 3, pp. 656–659. https://doi.org/10.1111/j.1471-8286.2006.01288.x

    Article  CAS  Google Scholar 

  11. Sambrook, J. and Russell, D.W., Molecular Cloning: A Laboratory Manual, New York: Cold Spring Harbor Laboratory Press, 2001, 3rd ed.

    Google Scholar 

  12. Peakall, R. and Smouse, P.E., GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research—an update, Bioinformatics, 2012, vol. 28, no. 19, pp. 2537–2539. https://doi.org/10.1093/bioinformatics/bts460

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Feng, X., Yu, X., Fu, B., He, S., and Tong, J., Development of 159 transcript-associated microsatellite markers in silver carp (Hypophthalmichthys molitrix), Conserv. Genet. Res., 2014, vol. 6, no. 1, pp. 111–113. https://doi.org/10.1007/s12686-013-0017-3

    Article  Google Scholar 

  14. Wang, C.Z., Liang, H.W., Zou, G.W., Luo, X.Z., Li, Z., Tian, H., and Hu, G.F., Genetic variation analysis of two silver carp populations in the middle and upper Yangtze River by microsatellite, Yi Chuan, 2008, vol. 30, no. 10, pp. 1341–1348. https://doi.org/10.3724/SP.J.1005.2008.01341

    Article  CAS  PubMed  Google Scholar 

  15. Liao, M., Yang, G., Wang, X., Wang, D., Zou, G., and Wei, Q., Development of microsatellite DNA markers of silver carp (Hypophthalmichthys molitrix) and their cross-species application in bighead carp (Aristichthys nobilis), Mol. Ecol. Not., vol. 7, no. 1, pp. 95–99. https://doi.org/10.1111/j.1471-8286.2006.01542.x

    Article  Google Scholar 

  16. Guo, W., Xiaomu, YuX., and Tong, J., Development of 134 novel polynucleotide-repeat microsatellite markers in silver carp (Hypophthalmichthys molitrix), Conserv. Genet. Res., vol. 5, no. 2, pp. 525–528. https://doi.org/10.1007/s12686-012-9843-y

    Article  Google Scholar 

  17. Cheng, L., Liu, L., Yu, X., and Tong, J., Sixteen polymorphic microsatellites in bighead carp (Aristichthys nobilis) and cross-amplification in silver carp (Hypophthalmichthys molitrix), Mol. Ecol. Res., 2008, vol. 8, no. 3, pp. 656–658. https://doi.org/10.1111/j.1471-8286.2007.02037.x

    Article  CAS  Google Scholar 

  18. Stepien, C.A., Elz, A.E., and Snyder, M.R., Invasion genetics of the silver carp (Hypophthalmichthys molitrix) across North America: differentiation of fronts, introgression, and eDNA detection, BioRxiv, 2018 (in press). https://doi.org/10.1101/392704

  19. Nazish, N., Abbas, K., Abdullah, S., and Zia, M.A., Microsatellite diversity and population structure of Hypophthalmicthys molitrix in hatchery populations of Punjab, Turk. J. Fish. Aquat. Sci., 2018, vol. 18, pp. 1113–1122. https://doi.org/10.4194/1303-2712-v18_9_10

    Article  Google Scholar 

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Funding

The work was carried out as part of the event 21IB “To Develop and Introduce the Technology of Genetic Identification of Herbivorous and Salmon Fish Species” of Subprogram I “Innovative Biotechnologies 2020” of the State Program “High-Tech Technologies and Technique” for 2016–2020, Republic of Belarus.

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Correspondence to A. Yu. Nosova, V. N. Kipen, A. I. Tsar or V. A. Lemesh.

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Conflict of interests. The authors declare that they have no conflict of interest.

Statement on the welfare of animals. All applicable international, national, and/or institutional guidelines for the care and use of animals were followed.

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Translated by A. Barkhash

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Nosova, A.Y., Kipen, V.N., Tsar, A.I. et al. Estimating Genetic Diversity of Silver (Hypophthalmichthys molitrix Val.) and Bighead (Hypophthalmichthys nobilis Rich.) Carps Grown in Aquaculture in the Republic of Belarus Based on Polymorphism of Microsatellite Loci. Cytol. Genet. 53, 473–480 (2019). https://doi.org/10.3103/S0095452719060094

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