Abstract
The software implementation of the procedures of the JSM method of automated support of scientific research, which has been repeatedly used to solve problems associated with the prognosis of diseases based on various data, including genomic data, is considered. Attention is paid to techniques for optimizing memory usage and reducing computation time, including the organization of parallel execution of procedures. Development was conducted in python 3.7. Due to the described optimization, the computational procedure time was reduced by more than 20 times.
Similar content being viewed by others
REFERENCES
Chebanov, D.K. and Mikhailova, I.N., Intellectual mining of patient data with melanoma for identification of disease markers and critical genes, Autom. Doc. Math. Linguist., 2019, vol. 53, pp. 283–287.
Finn, V.K., On the heuristics of JSM research (additions to articles), Autom. Doc. Math. Linguist., 2019, vol. 53, pp. 250–282.
Finn, V.K., On the definition of empirical regularities by the JSM method for the automatic generation of hypotheses, Sci. Tech. Inf. Process., 2012, vol. 39, pp. 261–267.
Finn, V.K., Distributive lattices of inductive JSM procedures, Autom. Doc. Math. Linguist., 2014, vol. 48, pp. 265–295.
DSM-metod avtomaticheskogo porozhdeniya gipotez: Logicheskie i epistemologicheskie osnovaniya (The JSM-Method for Automatic Hypothesis Generation: Logical and Epistemological Foundations), Anshakov, O.M., Ed., Moscow: LIBROKOM, 2009.
Shesternikova, O.P., Finn, V.K., Vinokurova, L.V., Les’ko, K.A., Varvarina, G.G., and Tyulyaeva, E.Yu., An intelligent system for diagnostics of pancreatic diseases, Autom. Doc. Math. Linguist., 2019, vol. 53, pp. 288–294.
Kuznetsov, S.O. and Obiedkov, S.A., Comparing performance of algorithms for generating concept lattices, J. Exp. Theor. Artif. Intell., 2002, vol. 14, pp. 189–216.
Funding
This work was carried out with the financial support of the Russian Foundation for Basic Research (project no. 18-29-03063).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
The authors declare that they have no conflicts of interest.
About this article
Cite this article
Chebanov, D.K. On the Features of Implementation of the Solver of the JSM Method for Intellectual Data Analysis. Autom. Doc. Math. Linguist. 54, 196–201 (2020). https://doi.org/10.3103/S0005105520040020
Received:
Published:
Issue Date:
DOI: https://doi.org/10.3103/S0005105520040020