Central European Journal of Biology

, Volume 7, Issue 2, pp 230–240

On-line cell lysis of bacteria and its spores using a microfluidic biochip

  • Marianna Cíchová
  • Miloslava Prokšová
  • Lívia Tóthová
  • Hunor Sántha
  • Viktor Mayer
Research Article

DOI: 10.2478/s11535-012-0005-8

Cite this article as:
Cíchová, M., Prokšová, M., Tóthová, L. et al. cent.eur.j.biol. (2012) 7: 230. doi:10.2478/s11535-012-0005-8

Abstract

Optimal detection of pathogens by molecular methods in water samples depends on the ability to extract DNA rapidly and efficiently. In this study, an innovative method was developed using a microfluidic biochip, produced by microelectrochemical system technology, and capable of performing online cell lysis and DNA extraction during a continuous flow process. On-chip cell lysis based on chemical/physical methods was performed by employing a sufficient blend of water with the lysing buffer. The efficiency of lysis with microfluidic biochip was compared with thermal lysis in Eppendorf tubes and with two commercial DNA extraction kits: Power Water DNA isolation kit and ForensicGEM Saliva isolation kit in parallel tests. Two lysing buffers containing 1% Triton X-100 or 5% Chelex were assessed for their lysis effectiveness on a microfluidic biochip. SYBR Green real-time PCR analysis revealed that cell lysis on a microfluidic biochip using 5% Chelex buffer provided better or comparable recovery of DNA than commercial isolation kits. The system yielded better results for Gram-positive bacteria than for Gram-negative bacteria and spores of Gram-positive bacteria, within the limits of detection at 103 CFU/ml. During the continuous flow process in the system, rapid cells lysis with PCR-amplifiable genomic DNA were achieved within 20 minutes.

Keywords

Cell lysis Chelex 100 Microfluidic biochip SYBR Green real-time PCR Waterborne pathogens 

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Copyright information

© © Versita Warsaw and Springer-Verlag Wien 2012

Authors and Affiliations

  • Marianna Cíchová
    • 1
  • Miloslava Prokšová
    • 1
  • Lívia Tóthová
    • 1
  • Hunor Sántha
    • 2
  • Viktor Mayer
    • 2
  1. 1.Water Research InstituteNational Water Reference Laboratory in SlovakiaBratislavaSlovak Republic
  2. 2.Department of Electronics TechnologyBudapest University of Technology and EconomicsBudapestHungary

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