Community Ecology

, Volume 13, Issue 1, pp 102–116 | Cite as

Community ecology: diversity and dynamics over time



This paper aims to show the relevance of past ecological records, at centennial to millennial timescales, for community ecological principles and theory, mainly in relation to temporal dynamics and the origin of present-day community patterns. The underlying assumption is that ecological time is a continuum and the ecological understanding of the present biosphere needs inputs from multilevel timescales. In particular, the so-called Q-time, embracing the Quaternary (the last 2.6 million years), is proposed as a key time period to understand present-day patterns and the underlying causal processes, as for example the latitudinal diversity gradient, the relationship between species richness and stability, the equilibrium/non-equilibrium conditions between communities and the environment, the main trends and clues on the origin of present-day species and the communities they form, the community succession under changing environmental conditions, or the nature (individual vs collective) of such biotic responses, among others. In this temporal context, neoecological studies and modeling, based on short-term evidence and calibration/validation data sets, are viewed as an important source for hypotheses to be tested with long-term ecological (i.e., palaeoecological) and molecular phylogenetic studies. The considerations around these topics provide valuable insights to address the potential future state of modern communities under the predicted global change, which would be useful to propose suitable conservation strategies. It is hoped that this paper will promote constructive discussions leading to a more close collaboration between neoecologists and palaeoecologists, in the way towards the natural convergence of both into one single, time-independent, discipline as is (or should be) ecology. As this paper has been conceived for both neo- and palaeoecologists, the message is twofold: to neoecologists, care about time; to palaeoecologists, care about ecology.


Biodiversity Community assembly Community responses Conservation Ecological time scales Latitudinal gradient Stability Succession 



Thousand years


latitudinal diversity gradient


Last Glacial Maximum


Million years


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  1. Ab’Sáber, N. 1982. The paleoclimate and paleoecology of Brazilian Amazônia. In: G. T. Prance (ed.), Biological Diversification in the Tropics. Columbia Univ. Press, New York. pp. 95–104.Google Scholar
  2. Adler, P. B., J. HilleRisLambers and J. M. Levine. 2007. A niche for neutrality. Ecol. Lett. 10:95–104.CrossRefGoogle Scholar
  3. Aleixo, A. 2004. Historical diversification of terra-firme forest bird superspecies, a phylogeographic perspective on the role of different hypothesis of Amazonian diversification. Evolution 58:1303–1317.CrossRefGoogle Scholar
  4. Anderson-Carpenter, L., J. S. McLachlan, S. T. Jackson, M. Kuch, C. Y. Lumibao and H. N. Poinar. 2011. Ancient DNA from lake sediments: Bridging the gap between paleoecology and genetics. BMC Evol. Biol. 11:30 ( Scholar
  5. Anthony, N. M., M. Johnson-Bawe, K. Jeffery, S. L. Clifford, K. A. Abernethy, C. E. Tutin, S. A. Lahm, L. J. T. White, J. F. Utley, E. J. Wickings. and M. W. Bruford. 2007. The role of Pleistocene refugia and rivers in shaping gorilla genetic diversity in central Africa. Proc. Natl. Acad. Sci. USA 104:20432– 20436.CrossRefGoogle Scholar
  6. Arita, H.T. and E. Vázquez-Domínguez. 2008. The tropics, cradle, museum or casino? A dynamic null model for latitudinal gradients of species diversity. Ecol. Lett. 11:653–663.CrossRefGoogle Scholar
  7. Arkle, R. S., D. S. Pilliod and K. Strickler. 2010. Fire, flow and dynamic equilibrium in stream macroinvertebrate communities. Freshw. Biol. 55:299–314.CrossRefGoogle Scholar
  8. Ashcroft, M. B., J. R. Gollan, D. I. Warton and D. Ramp. 2012. A novel approach to quantify and locate potential microrefugia using topoclimate, climate stability, and isolation from the matriz. Glob. Change Biol. doi: 10.1111/j.1365-2486.2012.02661.xGoogle Scholar
  9. Barnosky, A. D., P. L. Koch, R. S. Feranec, S. L. Wing and A. B. Shabel. 2004. Assessing the causes of late Pleistocene extinctions on the continents. Science 396:70–75.CrossRefGoogle Scholar
  10. Bascompte, J. 2009. Disentangling the web of life. Science 325:416–419.CrossRefGoogle Scholar
  11. Baselga, A. and M. B. Araújo. 2009. Individualistic vs community modelling of species distribution under climate change. Ecography 32:55–65.CrossRefGoogle Scholar
  12. Bennett, K. D. 1990. Milankovitch cycles and their effects on species in ecological and evolutionary time. Paleobiology 16:11– 21.CrossRefGoogle Scholar
  13. Bennett, K. D. 1997. Evolution and Ecology, the Pace of Life. Cambridge Univ. Press, Cambridge.Google Scholar
  14. Bennett, K. D. and K. J. Willis 2000. Effect of global atmospheric carbon dioxide on glacial-interglacial vegetation change. Glob. Ecol. Biogeogr. 9:355–361.CrossRefGoogle Scholar
  15. Birks, H. J. B. 1980. The present flora and vegetation of the moraines of the Klutlan Glacier, Yukon Territory, Canada: a study in plant succession. Quat. Res. 14:60–86.CrossRefGoogle Scholar
  16. Birks, H. J. B. 1989. Holocene isochrone maps and patterns of tree-spreading in the British Isles. J. Biogeogr. 16:503–540.CrossRefGoogle Scholar
  17. Birks, H. J. B. 1993. Quaternary paleoecology and vegetation science – current contributions and possible future developments. Rev. Palaeobot. Palynol. 79:153–177.CrossRefGoogle Scholar
  18. Birks, H. J. B. and H. H. Birks. 1980. Quaternary Palaeoecology. Edward Arnold, London.Google Scholar
  19. Birks, H. J. B. and H. H. Birks 2008. Biological responses to rapid climate change at the Younger Dryas-Holocene transition at Krĺkenes, western Norway. The Holocene 18:19–30.CrossRefGoogle Scholar
  20. Birks, H. J. B. and K. J. Willis. 2008. Alpines, trees, and refugia in Europe. Plant Ecol. Div. 1:147–160.CrossRefGoogle Scholar
  21. Birks, H. J. B., O. Heiri, H. Seppä and A. E. Bjune. 2010. Strengths and weaknesses of quantitative climate reconstructions based on late-Quaternary biological proxies. Open Ecol. J. 3:68–110.CrossRefGoogle Scholar
  22. Brewer, S., R. Cheddadi, J. L. de Beaulieu and M. Reille. 2002. The spread of deciduous Quercus throughout Europe since the last glacial period. Forest Ecol. Manag. 156:27–48.CrossRefGoogle Scholar
  23. Blackburn, T. M. and K. J. Gaston. 1996. A sideways look at patterns in species richness, or why there are so few species outside the tropics. Biodiv. Lett. 3:44–353.CrossRefGoogle Scholar
  24. Bradley, R. S., K. Alverson and T. F. Pedersen. 2003. Challenges of a changing Earth, past perspectives, future concerns. In: K. D. Alverson, R. S. Bradley and T. F. Pedersen (eds), Palaeo-climate, Global Change and the Future. Springer, Berlin. pp. 163–167.CrossRefGoogle Scholar
  25. Broecker, W. S. 1987. Unpleasant surprises in the greenhouse. Nature 328:123–126.CrossRefGoogle Scholar
  26. Brooker, R. W., R. M. Callaway, L. A. Cavieres, Z. Kikvidze, C. J. Lortie, R. Michalet, F. I. Pugnaire, A. Valiente-Banuet, and T. G. Whitham. 2009. Don’t diss integration, a comment on Ricklefs’s Disintegrating Communities. Am. Nat. 174:919–927.CrossRefGoogle Scholar
  27. Bush, M. B. 1994. Amazonian speciation, a necessarily complex model. J. Biogeogr. 21:5–17.CrossRefGoogle Scholar
  28. Bush, M. B. 1996. Amazonian conservation in a changing world. Biol. Conserv. 76:219–228.CrossRefGoogle Scholar
  29. Bush, M. B. 2002. Distributional change and conservation on the Andean flank, a palaeoecological perspective. Glob. Ecol. Biogeogr. 11:463–473.CrossRefGoogle Scholar
  30. Bush, M. B. and P. E. De Oliveira. 2006. The rise and fall of the refugial hypothesis of amazonian speciation, a paleoecological perspective. Biota Neotrop. 6 (
  31. Bush, M. B. and H. Hooghiemstra. 2005. Tropical biotic responses to climate change. In: T. E. Lovejoy and L. Hannah (eds), Climate Change and Biodiversity. Yale Univ. Press, New Haven. pp. 125–137Google Scholar
  32. Bush, M. B., W. D. Gosling and P. A. Colinvaux. 2007. Climate change in the lowlands of the Amazon basin. In: M. B. Bush and J. R. Flenley (eds), Tropical Rainforest Responses to Climatic Changes. Springer-Praxis, Chichester. pp. 55–76.CrossRefGoogle Scholar
  33. Bush, M. B., M. Stute, M.-P. Ledru, H. Behling, P. A. Colinvaux, P. E. De Oliveira, E. C. Grimm, H. Hooghiemstra, S. Haberle, B. W. Leyden, M. L. Salgado-Labouriau and R. Webb. 2001. Paleotemperature estaimates for the lowland Americas between 30oS and 30oN at the Last Glacial Maximum. In: V. Markgraf (ed), Interhemispheric Climate Linkages. Academic Press, San Diego. pp. 293–306.CrossRefGoogle Scholar
  34. Carrión, J. S. and S. Fernández. 2009. The survival of the ‘natural potential vegetation’ concept (or the power of tradition). J. Biogeogr. 36:2202–2203.CrossRefGoogle Scholar
  35. Cavender-Bares, J., K. H. Kozak, P. V. A. Fine and S. W. Kembel. 2009. The merging of community ecology and phylogenetic biology. Ecol. Lett. 12:693–715.CrossRefPubMedPubMedCentralGoogle Scholar
  36. Chase, J. M. and M. A. Leibold. 2003. Ecological Niches, Linking Classical and Contemporary Approaches. Univ. of Chicago Press, Chicago.CrossRefGoogle Scholar
  37. Clark, P. U., A. S. Dyke, J. D. Shakum, E. Carlson, J. Clark, B. Wohlfarth, J. X. Mitrovica, S. W. Hostetler and A. M. McCabe. 2009. The last glacial maximum. Science 325:710– 714.CrossRefGoogle Scholar
  38. Clements, F. E. 1916. Plant Succession, an Analysis of the Development of Vegetation. Carnegie Institute, Washington.CrossRefGoogle Scholar
  39. Cole, K. 2009. Vegetation response to early Holocene warming as an analog for current and future changes. Cons. Biol. 24:29–37.CrossRefGoogle Scholar
  40. Colinvaux, P. A. 1998. A new vicariance model for Amazon endemics. Glob. Ecol. Biogeogr. Lett. 7:95–96.CrossRefGoogle Scholar
  41. Colinvaux, P. A. and P. E. De Oliveira. 2001. Amazon plant diversity and climate through the Cenozoic. Palaeogeogr. Palaeo-climat ol. Palaeoecol. 166:51–63.CrossRefGoogle Scholar
  42. Colinvaux, P. A., P. E. De Oliveira and M. B. Bush. 2000. Amazonian and neotropical plant communities on glacial time scales, the failure of the aridity and refuge hypotheses. Quat. Sci. Rev. 19:141–169.CrossRefGoogle Scholar
  43. Conway, S. 1995. Ecology in deep time. Trends Ecol. Evol. 10:290–294.CrossRefGoogle Scholar
  44. Colyvan, M., S. Linquist, W. Grey, P. Griffiths, J. Odenbaugh and H. P. Possingham. 2009. Philosophical issues in ecology, recent trends and future directions. Ecol. Soc. 14, 22 ( Scholar
  45. Clutton-Brock, T. and B. C. Sheldon. 2010. Individuals and populations, the role of long-term, individual-based studies of animals in ecology and evolutionary biology, Trends Ecol. Evol. 25:562–573.CrossRefGoogle Scholar
  46. Crisp, M. D., S. A. Trewick and L. G. Cook. 2011. Hypothesis testing in biogeography. Trends Ecol. Evol. 26: 66–72.CrossRefGoogle Scholar
  47. Dalén, L., V. Nyström, C. Valdiosera, M. Germonpré, M. Sablin, E. Turner, A. Angerbjörn, J. L. Arsuaga and A. Götherström. 2007. Ancient DNA reveals lack of postglacial habitat tracking in the arctic fox. Proc. Natl. Acad. Sci. USA 104:6726–6729.CrossRefGoogle Scholar
  48. Davis, M. B. 1976. Pleistocene biogeography of temperate deciduous forests. Geosci. Man 13: 13–26.Google Scholar
  49. Davis, M. B. 1981. Quaternary history and the stability of forest communities. In: D. C. West, D. B. Shugart and D. B. Botkin (eds), Forest Succession, Concepts and Applications. Springer, New York. pp. 152–153.Google Scholar
  50. Davis, M. B. 1989. Insights from palaeoecology on global change. Ecol. Soc. Am. Bull. 70:222–228.Google Scholar
  51. Davis, M. B. 1991. Research questions posed by the palaeoecological record of global change. In: R. S. Bradley (ed), Global Changes of the Past. UCAR Office for Interdisciplinary Studies. Univ. Corporation for Atmospheric Research, Office of Interdisciplinary Earth Studies, Boulder. pp. 385–395.Google Scholar
  52. Davis, M. B. and R. G. Shaw. 2001. Range shifts and adaptative responses to Quaternary climatic change. Science 292:673–679.CrossRefGoogle Scholar
  53. Delcourt, H. R. and P. A. Delcourt. 1988. Quaternary landscape ecology, relevant scales in space and time. Landsc. Ecol. 2:23– 44.CrossRefGoogle Scholar
  54. Delcourt, H. R. and P. A. Delcourt. 1991. Quaternary Ecology: a Paleoecological Perspective. Chapman and Hall, London.CrossRefGoogle Scholar
  55. Deng, B. 2010. From energy gradient and natural selection to biodiversity and stability of ecosystems. Open Ecol. J. 3:95–110.CrossRefGoogle Scholar
  56. Erwin, D. H. 2009. Climate as a driver of evolutionary change. Curr. Biol. 19:R575–R583.CrossRefGoogle Scholar
  57. Fischer, A. G. 1960. Latitudinal variations in organic diversity. Evolution 14:64–81.CrossRefGoogle Scholar
  58. Foster, D. R., P. K. Schoonmaker and S. T. A. Pickett. 1990. Insights from paleoecology to community ecology. Trends Ecol. Evol. 5:119–122.CrossRefGoogle Scholar
  59. Gibbard, P. L., M. J. Head and M. J. C. Walker. 2010. Formal ratification of the Quaternary System/Period and the Pleistocene Series/Epoch with a base at 2.58 Ma. J. Quat. Sci. 25:96–102.CrossRefGoogle Scholar
  60. Gilpin, M. E. and T. J. Case. 1976. Multiple domains of attraction in competition communities. Nature 261:40–42.CrossRefGoogle Scholar
  61. Gleason, H. A. 1926. The individualistic concept of the plant association. Bull. Torrey Bot. Club 53:7–26.CrossRefGoogle Scholar
  62. Godwin, H. 1956. The History of the British Flora: a Factual Basis for Phytogeography. Cambridge Univ. Press, Cambridge.Google Scholar
  63. Haffer, J. 1969. Speciation in Amazonian forest birds. Science 165:131–137.CrossRefGoogle Scholar
  64. Hagerman, S., H. Dowlatabadi, T. Satterfield and T. McDaniels 2010. Expert views of biodiversity conservation in an era of climate change. Glob. Environ. Change 20:192–207.CrossRefGoogle Scholar
  65. Hampe, A. and R. J. Petit. 2005. Conserving biodiversity under climate change: the rear edge matters. Ecol. Lett. 8:461–467.CrossRefGoogle Scholar
  66. Harrison, S. and H. Connell. 2008. Toward a better understanding of the regional causes of local community richness. Ecol. Lett. 11:969–979.CrossRefGoogle Scholar
  67. Hawkins, B. A., J. A. Diniz-Filho, C. A. Jaramillo and S. A. Soeller. 2007. Climate, niche conservatism and the bird diversity gradient. Am. Nat. 170 (suppl 2):S16–27.CrossRefGoogle Scholar
  68. Hewitt, G. M. 1999. Post-glacial re-colonization of European biota. Biol. J. Linn. Soc. 68:87–112.CrossRefGoogle Scholar
  69. Hillebrand, H. 2004. On the generality of the Latitudinal Diversity Gradient. Am. Nat. 163:193–211.CrossRefGoogle Scholar
  70. Hinnov, L. A., M. Schulz and P. Yiou. 2002. Interhemispheric space–time attributes of the Dansgaard–Oeschger oscillations between 100 and 0 ka. Quat. Sci. Rev. 21:1213–1228.CrossRefGoogle Scholar
  71. Hofreiter, M., M. Collins and J. R. Stewart. 2012. Ancient biomolecules in Quaternary palaeoecology. Quat. Sic. Rev. 33:1– 13.CrossRefGoogle Scholar
  72. Holling, C. S. 1973. Resilience and stability of ecological systems. Ann. Rev. Ecol. Syst. 4:1–23.CrossRefGoogle Scholar
  73. Holt, R. D. 2005. On the integration of community ecology and evolutionary biology, historical perspectives and current propects. In: B. Beisner and K. Cuddington (eds), Ecological Paradigms Lost, Routes of Theory Change. Academic Press, San Diego. pp. 235–271.CrossRefGoogle Scholar
  74. Hoorn, C., F. P. Wesselingh, H. ter Steege, M. A. Bermudez, A. Mora, J. Sevink, I. Sanmartín, A. Sanchez-Meseguer, C. L. Anderson, J. P. Figueiredo, C. Jaramillo, D. Riff, F. R. Negri, H. Hooghiemstra, J. Lundberg, T. Stadler, T. Särkinen and A. Antonelli. 2010. Amazonia through time, Andean uplift, climate change, landscape evolution, and biodiversity. Science 330:927–931.CrossRefGoogle Scholar
  75. Hope, G. S. 1994. Quaternary vegetation. In: R. S. Hill (ed.), History of the Australian Vegetation, Cretaceous to Recent. Cambridge Univ. Press, Cambridge. pp. 368–389.Google Scholar
  76. Hubbell, S. P. 2001. The Unified Neutral Theory of Biodiversity and Biogeography. Princeton Univ. Press, Princeton.Google Scholar
  77. Hubbell, S. P. 2005. Neutral theory in community ecology and the hypothesis of community equivalence. Funct. Ecol. 19:166–172.CrossRefGoogle Scholar
  78. Hunter, M. L., G. L. Jacobson and T. Webb. 1988. Paleoecology and the coarse-filter approcah to maintaining biological diversity. Cons. Biol. 2:375–385.CrossRefGoogle Scholar
  79. Huntley, B. 1996. Quaternary palaeoecology and ecology. Quat. Sci. Rev. 15:591–606.CrossRefGoogle Scholar
  80. Huntley, B. and H. J. B. Birks. 1983. An Atlas of Past and Present Pollen Maps for Europe, 0-13000 years ago. Cambridge Univ. Press, Cambridge.Google Scholar
  81. Hutchinson, G. E. 1965. The Ecological Theater and the Evolutionary Play. Yale Univ. Press, New Haven.Google Scholar
  82. IUCN. 2001. IUCN Red List Categories and Criteria , Version 3.1. IUCN Species Survival Commission. IUCN, Gland.Google Scholar
  83. Ives, A. R. 2005. Communtiy diversity and stability, changing perspectives and changing definitions. In: B. Beisner and K. Cuddington (eds), Ecological Paradigms Lost, Routes of Theory Change. Academic Press, San Diego. pp. 159–182.CrossRefGoogle Scholar
  84. Jackson, J. B. C. and D. H. Erwin. 2006. What can we learn about ecology and evolution from the fossil record? Trends Ecol. Evol. 21:322–328.CrossRefGoogle Scholar
  85. Jackson, S. T. 2001. Integrating ecological dynamics across time-scales, realtime, Q-time and deep time. Palaios 16:1–2.CrossRefGoogle Scholar
  86. Jackson, S. T. and D. F. Sax. 2010. Balancing biodiversity in a changing environment, extinction debt, immigration credit and species turnover. Trends Ecol. Evol. 25:153–160.CrossRefGoogle Scholar
  87. Jackson, S. T. and Ch. Weng. 1999. Late Quaternary extinction of a tree species in eastern North America. Proc. Natl. Acad. Sci. USA 96:13847–13852.CrossRefGoogle Scholar
  88. Jackson, S. T. and J. W. Williams. 2004. Modern analogs in Quaternary paleoecology: here today, gone yesterday, gone tomorrow. Ann. Rev. Earth Planet. Sci. 32:495–537.CrossRefGoogle Scholar
  89. Jackson, S. T., R. P. Futyma and D. A. Wilcox. 1988. A paleoecological test of a classical hydrosere in the Lake Michigan dunes. Ecology 69:928–936.CrossRefGoogle Scholar
  90. Jacobson, G. L. and E. C. Grimm. 1986. A numerical analysis of Holocene forest and prairie vegetation in central Minnesota. Ecology 67:958–966.CrossRefGoogle Scholar
  91. Janssens, S. B., E. B. Knox, S. Huysmans, E. F. Smets and V. S. F. T. Merckx. 2009. Rapid radiation of Impatiens (Balsami-naceae) during Pliocene and Pleistocene: Result of a global climate change. Mol. Phylogenet. Evol. 52:806–824.CrossRefGoogle Scholar
  92. Jaramillo, C., M. J. Rueda and G. Mora. 2006. Cenozoic plant diversity in the Neotropics. Science 311:1893–1896.CrossRefGoogle Scholar
  93. Jax, K. 2006. Ecological units, definitions and application. Quart. Rev. Biol. 81:237–258.CrossRefGoogle Scholar
  94. Johnson, E. A. and K. Miyanishi. 2008. Testing the assumptions of chronosequences in succession. Ecol. Lett. 11:419-431.CrossRefGoogle Scholar
  95. Jørgensen, T., K. H. Kjćr, J. Haile, M. Rasmussen, S. Boessenkool, K. Andersen, E. Coissac, P. Taberlet, C. Brochmann, L. Orlando, M. T. P. Gilbert and E. Willerslev. 2011a. Islands in the ice: detecting past vegetation on Greenlandic nunataks using historical records and sedimentaru ancient DNA Meta-barcoding. Mol. Ecol., doi: 10.1111/j.1365-294X.2011.05278.xGoogle Scholar
  96. Jørgensen, T., J. Haile, P. Möller, A. Andreev, S. Boessenkool, M. Rasmussen, F. Kienast, E. Coissac, P. Taberlet, C. Brochmann, N. H. Bigelow, K. Andersen, L. Orlando, M. T. P. Gilbert and E. Willerslev. 2011b. A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability. Mol. Ecol., doi: 10.1111/j.1365-294X.2011.05287.xGoogle Scholar
  97. Kelly, C. K., M. W. Chase, A. de Bruijn, M. F. Fay and F. I. Woodward. 2003. Temperature based population segregation in birch. Ecol. Lett. 6:87–89.CrossRefGoogle Scholar
  98. Koch, P. L. and A. D. Barnosky. 2006. Late Quaternary exticntions, state of the debate. Ann. Rev. Ecol. Evol. Syst. 37:215–250.CrossRefGoogle Scholar
  99. Lawton, J. H. 1999. Are there general laws in ecology? Oikos 84:177–192.CrossRefGoogle Scholar
  100. Lewis, K, S. Epstein, V. G. Godody and S.-H. Hong. 2008. Intact DNA in ancient permafrost. Trends Microbiol. 16:92-94.CrossRefGoogle Scholar
  101. Lisiecki, L. E. and M. E. Raymo. 2005. A Pliocene-Pleistocene stack of 57 globally distributed benthic d18O records. Paleo-ceanography 20:1–17.Google Scholar
  102. Loreau, M. 2010. Linking biodiversity and ecosystems, towards a unifying ecological theory. Phil. Trans. R. Soc. B 365:49–60.CrossRefGoogle Scholar
  103. MacLachlan, J. S., J. S. Clark and P. S. Manos. 2005. Molecular indicators of tree migration under rapid climate change. Ecology 86:2088–2098.CrossRefGoogle Scholar
  104. Magri, D. 2008. Patterns of post-glacial spread and the extent of glacial refugia of European beech (Fagus sylvatica). J. Biogeogr. 35:450–463.CrossRefGoogle Scholar
  105. Magurran, A. E. 2007. Species abundance distributions over time. Ecol. Lett. 10:347–354.CrossRefGoogle Scholar
  106. Markgraf, V. and M. McGlone. 2005. South temperate ecosystem responses. In: T. E. Lovejoy and L. Hannah (eds), Climate change and Biodiversity. Yale Univ. Press, New Haven. pp. 142–156.Google Scholar
  107. Markgraf, V., M. McGlone and G. Hope. 1995. Neogene paleoen-vironmental and paleoclimatic change in southern temperate ecosystems - a southern perspective. Trends Ecol. Evol. 10:143–147.CrossRefPubMedPubMedCentralGoogle Scholar
  108. McGill, B. J. 2003. A test of the unified neutral theory of biodiversity. Nature 422:881–885.CrossRefPubMedPubMedCentralGoogle Scholar
  109. McGill, B. J., B. J. Enquist, E. Weiher and M. Westoby. 2006. Rebuilding community ecology from functional traits. Trends Ecol. Evol. 21:178–185.CrossRefPubMedPubMedCentralGoogle Scholar
  110. McGlone, M. S. 1996. When history matters, scale, time, climate and tree diversity. Glob. Ecol. Biogeogr. 5:309–314.CrossRefGoogle Scholar
  111. McIntosh, R. P. 1995. H. A. Gleason’s ‘individualistic concept’ and theory of animal communities, a continuing controversy. Biol. Rev. 70:317–357.CrossRefGoogle Scholar
  112. Mergeay, J., L. De Meester, H. Eggermont and D. Verschuren. 2011. Priority effects and species sorting in a long paleoe-cological record of repeated community assembly through time. E cology 92:2267–2275.Google Scholar
  113. Mitchell, F. J. G. 2010. Exploring vegetation in the fourth dimension. Trends Ecol. Evol. 26:45–52.CrossRefGoogle Scholar
  114. Mittelbach, G. G., D. W. Schemske, H. V. Cornell, A. P. Allen, J. M. Brown,, M. B. Bush, S. P. Harrison, A. H. Hurlbert, N. Knowlton, H. A. Lessios, C. M. McCain, A. R. McCune, L. A. McDade, M. A. McPeek, T. J. Near, T. D. Price, R. E. Ricklefs, K. Roy, D. F. Sax, D. Schluter, J. M. Sobel. and M. Turelli. 2007. Evolution and the latitudinal diversity gradient, speciation, extinction and biogeography. Ecol. Lett. 4:315–331.CrossRefGoogle Scholar
  115. Moritz, C., J. L. Paton, C. J. Schneider and T. B. Smith. 2000. Diversification of rainforest faunas, An integrated molecular approach. Ann. Rev. Ecol. Syst. 31:533–563.CrossRefGoogle Scholar
  116. Moya-Larańo, J. 2010. Can temperature and water availability contribute to the maintenance of latitudinal diversity by increasing the rate of biotic interactions? Open Ecol. J. 3:1–13.CrossRefGoogle Scholar
  117. Mullen, S.P., W. K. Savage, N. Wahlberg and K. R. Willmott. 2011. Rapid diversification and not clade age explains high diversity in neotropical Adelpha butterflies. Proc. R. Soc. B 278:1777–1785.CrossRefGoogle Scholar
  118. Noonan, B. P. and P. Gaucher. 2005. Phylogeography and demography of Guianan harlequin toads (Atelopus), diversification within a refuge. Mol. Ecol. 14:3017–3031.CrossRefGoogle Scholar
  119. Nee, S. and G. Stone. 2003. The end of the beginning for neutral theory. Trends Ecol. Evol. 18:433–434.CrossRefGoogle Scholar
  120. O’Dwyer, J. P. and J. L. Green. 2010. Field theory for biogeography, a spatially explicit model for predicting patterns of biodiversity. Ecol. Lett. 13:87–95.CrossRefPubMedPubMedCentralGoogle Scholar
  121. Overpeck, J. 1996. Warm climate surprises. Science 271:1820– 1821.CrossRefGoogle Scholar
  122. Pääbo, S., H. Poinar, D. Serre, V. Jaenicke-Despres, J. Hebler, N. Rohland, M. Kuch, J. Krause, L. Vigilant and M. Hofreiter. 2004. Genetic analyses from ancient DNA. Ann. Rev. Genet. 38:645–679.CrossRefGoogle Scholar
  123. Palmer, M. W. and P. S. White. 1994. On the existence of ecological communities. J. Veg. Sci. 5:279–282.CrossRefGoogle Scholar
  124. Palmer, M. A., R. F. Ambrose. and N. L. Poff. 1997. Ecological theory and community restoration ecology. Restor. Ecol. 5:291–300.CrossRefGoogle Scholar
  125. Pearson, R. G. 2006. Climate change and the migration capacity of species. Trends Ecol. Evol. 21:111–113.CrossRefGoogle Scholar
  126. Peng, C., J. Guiot, H. Wu, H. Jiang and Y. Luo. 2011. Integrating models with data in ecology and palaeoecology, advances towards a model-data fusion approach. Ecol. Lett. 14:522–536.CrossRefGoogle Scholar
  127. Pennington, R. T. and C. W. Dick. 2004. The role of immigrants in the assembly of the South American rainforest tree flora. Phil. Trans. R. Soc. B 359:1611–1622.CrossRefGoogle Scholar
  128. Pennington, R.T., Q. C. B. Cronk and J. A. Richardson. 2004. Introduction and synthesis, plant phylogeny and the origin of major biomes. Phil. Trans. R. Soc. B 359:1455–1464.CrossRefGoogle Scholar
  129. Pennington, R. T., J. E. Richardson and M. Lavin. 2006. Insights into the historical construction of species-rich biomes from dated plant phylogenies, neutral ecological theory and phylo-genetic community structure. New Phytol. 172:605–616.CrossRefGoogle Scholar
  130. Plana, V. 2004. Mechanisms and tempo of evolution in the African Guineo-Congolian rainforest. Phil. Trans. R. Soc. B 359:1585– 1594.CrossRefGoogle Scholar
  131. Postigo-Mijarra, J. M., C. Morla, E. Barrón, C. Morales-Molino and S. García. 2010. Patterns of extinction and persistence of Arcotertiary flora in Iberia during the Quaternary. Rev. Pa-laeobot. Palynol. 162:416–426.CrossRefGoogle Scholar
  132. Prach, K. and L. R. Walker. 2011. Four opportunities for studies of ecological succession. Trends Ecol. Evol. 26:119–123.CrossRefGoogle Scholar
  133. Prance, G. T. 1982. Biological Diversification in the Tropics. Columbia Univ. Press, New York.Google Scholar
  134. Prentice, I. C. 1988. Palaeoecology and plant population dynamics. Trends Ecol. Evol. 3:343–344.CrossRefGoogle Scholar
  135. Preston, F. W. 1960. Time and space and the variation of species. Ecology 41:611–627.CrossRefGoogle Scholar
  136. Provan, J. and K. D. Bennett. 2008. Phylogeographic insights into cryptic glacial refugia. Trends Ecol. Evol. 23:564–571.CrossRefGoogle Scholar
  137. Ricklefs, R. E. 2008. Disintegration of the ecological community. Am. Nat. 172:741–750.CrossRefPubMedPubMedCentralGoogle Scholar
  138. Ricklefs, R. E. 2009. A brief response to Brooker et al.’s comment. Am. Nat. 174:928–931.CrossRefGoogle Scholar
  139. Rodríguez, J. P., K. M. Rodríguez-Clark, J. E. M. Baillie, N. Ash, J. Benson, T. Boucher, C. Brown, N. D. Burguess, B. Collen, M. Jennings, D. A. Keith, E. Nicholson, C. Revenga, B. Reyers, M. Rouget, T. Smith, M. Spalding, A. Taber, M. Walpole, I. Zager, T. Zamin. 2010. Establishing IUCN Red List criteria for threatened ecosystems. Cons. Biol. 25:21–29.CrossRefGoogle Scholar
  140. Rosenzweig, M. L. 1995. Species Diversity in Space and Time. Cambridge Univ. Press, Cambridge.CrossRefGoogle Scholar
  141. Rull, V. 2005. Biotic diversification in the Guayana Highlands, a proposal. J. Biogeogr. 32:921–927.CrossRefGoogle Scholar
  142. Rull, V. 2008. Speciation timing and neotropical biodiversity, the Tertiary-Quaternary debate in the light of molecular phyloge-netic evidence. Mol. Ecol. 17:2722–2729.CrossRefGoogle Scholar
  143. Rull, V. 2009. Microrefugia. J. Biogeogr. 36:481–484.CrossRefGoogle Scholar
  144. Rull, V. 2010. Ecology and palaeoecology, two aproaches, one objective. Open Ecol. J. 3:1–5.CrossRefGoogle Scholar
  145. Rull, V. 2011a. Sustainability, capitalism and evolution. EMBO Rep. 12:103–106.CrossRefPubMedPubMedCentralGoogle Scholar
  146. Rull, V. 2011b. Origins of biodiversity. Science 331:398–299.CrossRefGoogle Scholar
  147. Rull, V. 2011c. Neotropical biodiversity: timing and potential drivers. Trends Ecol. Evol. 26:508–513.CrossRefGoogle Scholar
  148. Rull, V. and T. Vegas-Vilarrúbia. 2011. What is long-term in ecology? Trends Ecol. Evol. 26:3-4.CrossRefGoogle Scholar
  149. Salo, J., R. Kalliola, I. Häkkinen, Y. Näkinen, P. Niemelä, M. Puhakka and P. D. Coley. 1986. River dynamics and the diversity of Amazon lowland forest. Nature 322:254-258.CrossRefGoogle Scholar
  150. Scherrer, D. and C. Körner. 2011. Topographically controlled thermal-habitat differentiation buffers alpine plant diversity against climate warming. J. Biogeogr. 38:406-416.CrossRefGoogle Scholar
  151. Scheiner, S. M. and M. R. Willig. 2008. A general theory of ecology. Theoret. Ecol. 1:21-28.CrossRefGoogle Scholar
  152. Schmidt, G. and W. Schröder. 2011. Regionalisation of climate variability used for modelling the dispersal of genetically modified oil seed rape in Northern Germany. Ecol. Ind. 11:951-963.CrossRefGoogle Scholar
  153. Schoonmaker, P. K. and D. R. Foster. 1991. Some implications of paleoecology for contemporary ecology. Bot. Rev. 57:204-245.CrossRefGoogle Scholar
  154. Shakun, J. D. and A. E. Carlson. 2010. A global perspective on Last Glacial Maximum to Holocene climate change. Quat. Sci. Rev. 29:1801-1816.CrossRefGoogle Scholar
  155. Silvertown, J., J. Tallowin, C. Stevens, S. A. Power, V. Morgan, B. Emmett, A. Hester, P. J. Grime, M. Morecroft, R. Buxton, P. Poulton, R. Links and R. Bardgett. 2010. Emvironmental myopia, a diagnosis and a remedy. Trends Ecol. Evol. 25:556-561.CrossRefGoogle Scholar
  156. Simberloff, D. 2004. Community ecology, is it time to move on? Am. Nat. 163:787-799.CrossRefGoogle Scholar
  157. Snedaker, S. C. 1982. Mangrove species zonation, why? In: D. N. Sen and K. S. Rajpurohit (eds), Tasks for Vegetation Science. Dr. W. Junk Publishers, The Hague. pp. 111–125.Google Scholar
  158. Sommer, R. S. and F. E. Zachos. 2009. Fossil evidence and phylo-geography of temperate species, ‘glacial refugia’ and post-glacial recolonization. J. Biogeogr. 36:2013-2020.CrossRefGoogle Scholar
  159. Stott, P. 1998. Biogeography and ecology in crisis, the urgent need for a new language. J. Biogeogr. 25:1-2.CrossRefGoogle Scholar
  160. Sublette, N., M. B. Bush and R. van Woesik. 2011. On metapopulations and microrefugia, palaeoecological insights. J. Biogeogr. 38:419-429.CrossRefGoogle Scholar
  161. Ter Steege, H. 2010. How neutral is ecology? Biotropica 42:631-633.CrossRefGoogle Scholar
  162. Tilman D. 2004. Niche tradeoffs, neutrality, and community structure, a stochastic theory of resource competition, invasion, and community assembly. Proc. Natl. Acad. Sci. USA 101:10854-10861.CrossRefGoogle Scholar
  163. Turner, C. and R. G. West. 1968. The subdivision and zonation of interglacial periods. Eiszeitalt. Gegenw. 19:93-101.Google Scholar
  164. Tzedakis, P. C. and K. D. Bennett. 1995. Interglacial vegetation succession: A view from southern Europe. Quat. Sci. Rev. 14:967-982.CrossRefGoogle Scholar
  165. Valente, L. M., V. Savolainen and P. Vargas. 2010. Unparalleled rates of species diversification in Europe. Proc. R. Soc. B 277:1489-1496.CrossRefGoogle Scholar
  166. Vegas-Vilarrúbia, T., V. Rull, E. Montoya and E. Safont. 2011. Quaternary palaeoecology and nature conservation with an emphasis on global warming and fire, with examples from the Neotropics. Quat. Sci. Rev. 30:2361-2388.CrossRefGoogle Scholar
  167. Vellend, M. 2010. Conceptual synthesis in community ecology. Quart. Rev. Biol. 85:183-206.CrossRefGoogle Scholar
  168. Vonhof, H. B. and R. J. G. Kaandorp. 2010. Climate variation in Amazonia during the Neogene and the Quaternary. In: C. Hoorn and F. Wesselingh (eds), Amazonia, Landscape and Species Evolution. Wiley-Blackwell, Oxford. pp. 201–210.Google Scholar
  169. Walker, L. R., D. A. Wardle, R. D. Bardgett and D. B. Clarkson. 2010. The use of chronosequences in studies of ecological succession and soil development. J. Ecol. 98:725-736.CrossRefGoogle Scholar
  170. Webb, S. L. 1987. Beech range expansion and vegetation history, pollen stratigraphy of two Wisconsin lakes. Ecology 68:1993-2005.CrossRefGoogle Scholar
  171. Weir, J. T. and D. Schluter. 2007. The latitudinal gradient in recent speciation and extinction rates of birds and mammals. Science 315:1574–1576.CrossRefGoogle Scholar
  172. Wesselingh, F. P., C. Hoorn, S. B. Kroonenberg, A. Antonelli, J. G. Lundberg, H. B. Vonhof, and H. Hooghiemstra. 2010. On the origin of Amazonian landscapes and biodiversity, a synthesis. In: C. Hoorn and F. Wesselingh (eds.), Amazonia, Landscape and Species Evolution. Wiley-Blackwell, Oxford. pp. 421–431.Google Scholar
  173. West, R. G. 1964. Inter-relations of ecology and Quaternary paleobotany. J. Ecol. 52 (suppl):47-57.CrossRefGoogle Scholar
  174. West, R. G. 1977. Pleistocene Geology and Biology. Longman, London.Google Scholar
  175. West, R. G. 1980. Pleistocene forest history in East Anglia. New Phytol. 85:571-622.CrossRefGoogle Scholar
  176. Whitmore, T. C. and G. T. Prance. 1987. Biogeography and Quaternary History in Tropical America. Oxford Univ. Press, Oxford.Google Scholar
  177. Whittaker, R. H. 1951. A criticism of the plant association and climatic climax concepts. Northwest Sci. 25:17-31.Google Scholar
  178. Williams, J. W. and S. T. Jackson. 2007. Novel climates, no-analog communities, and ecological surprises. Front. Ecol. Env. 5:475-482.CrossRefGoogle Scholar
  179. Williams, J. W., J. L. Blois and B. N. Shuman. 2011. Extrinsic and intrinsic forcing of abrupt ecological change, case studies from the late Quaternary. J. Ecol. 99:664-677.CrossRefGoogle Scholar
  180. Willis, K. J. 1993. How old is ancient woodland? Trends Ecol. Evol. 8:427-428.CrossRefGoogle Scholar
  181. Willis, K. J. and T. H. van Andel. 2004. Trees or no trees? The environments of central and eastern Europe during the Last Glaciation. Quat. Sci. Rev. 23:2369-2387.CrossRefGoogle Scholar
  182. Willis, K. J. and S. Bhagwat. 2009. Biodiversity and climate change. Science 326:806-807.CrossRefGoogle Scholar
  183. Willis, K. J. and S. Bhagwat. 2010. Questions of importance to the conservation of biological biodiversity. Clim. Past 6:759-769.CrossRefGoogle Scholar
  184. Willis, K. J., M. B. Araújo, K. D. Bennett, B. Figueroa-Rangel, C. A. Froyd and N. Myers. 2007. How can a knowledge of the past help to conserve the future? Biodiversity conservation and the relevance of long-term ecological studies. Phil. Trans. R. Soc. B 362:175-186.CrossRefGoogle Scholar
  185. Willis, K. J., R. M. Bailey, S. A. Bhagwat and H. J. B. Birks. 2010. Biodiversity baselines, thresholds and resilience, testing predictions and assumptions using palaeoecological data. Trends Ecol. Evol. 25:583-591.CrossRefGoogle Scholar
  186. Wright, H. E. 1977. Quaternary vegetation history – some comparisons between Europe and America. Ann. Rev. Earth Planet. Sci. 5:123-158.CrossRefGoogle Scholar
  187. Yashina, S., S. Gubin, S. Maksimovich, A. Yashina, E. Gakhova and D. Gilichinsky. 2012. Regeneration of whole fertile plants from 30,000-y-old fruit tissue buried in Siberian permafrost. Proc. Natl. Acad. Sci. USA, doi: 10.1073/pnas.1118386109Google Scholar
  188. Zachos, J., M. Pagani, L. Sloan, E. Thomas and K. Billup. 2001. Trends, rhythms and aberrations in climate 65 Ma to present. Science 292:686-693.CrossRefGoogle Scholar
  189. Zink, R. M., J. Klicka and B. R. Barber. 2004. The tempo of avian diversification during the Quaternary. Phil. Trans. R. Soc. B 359:215-220.CrossRefGoogle Scholar

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Authors and Affiliations

  • V. Rull
    • 1
  1. 1.Palynology and Paleoecology LabBotanic Institute of Barcelona (IBB-CSIC-ICUB)BarcelonaSpain

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