Skip to main content
Log in

Characterization and expression analysis of a chalcone isomerase-like gene in relation to petal color of Actinidia chrysantha

  • Published:
Biologia Aims and scope Submit manuscript

Abstract

Chalcone isomerase-like (CHIL) belongs to the type IV CHI proteins whose roles in cell remain largely unclear. In the present study, we characterized an AcCHIL gene encoding Actinidia chrysantha CHIL protein. The very similar gene structure organization and high sequence identity of AcCHIL with the only two functionally reported CHIL genes (Japanese morning glory InCHIL and Arabidopsis AtCHIL) suggest a similar role of AcCHIL with AtCHIL and InCHIL in promoting flavonoid production and flower pigmentation. The spatial expression analysis shows that AcCHIL gene is expressed predominantly in leaves and stems of A. chrysantha. Consistent with the typical predicted low-temperature-responsive element, abscisic acid (ABA)-responsive element and heat stress-responsive element in the promoter sequence of AcCHIL, the expression of AcCHIL gene in leaves and stems of A. chrysantha, and in petals of A. eriantha are significantly up-regulated by low-temperature and exogenous ABA, but down-regulated by heat stress, though the mRNA levels of AcCHIL in petals of A. chrysantha are always weak and not affected by those stresses. Pink-red petals of A. eriantha instead of golden-yellow petals of A. chrysantha accumulated substantial anthocyanin in response to low temperature and exogenous ABA. Heat stress decreased the anthocyanin accumulation in A. eriantha petals. Interestingly, the content of a yellow colored chalcone, chalcone 2′-glucoside in golden-yellow petals of A. chrysantha is significantly higher than that in pink-red petals of A. eriantha under both the stressed and control conditions. A close correlation between the low levels of AcCHIL mRNA and high levels of accumulated yellow colored chalcone 2′-glucoside in A. chrysantha petals gives an explanation for the formation of distinctive golden-yellow petals in A. chrysantha.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+ Basic
$34.99 /Month
  • Get 10 units per month
  • Download Article/Chapter or eBook
  • 1 Unit = 1 Article or 1 Chapter
  • Cancel anytime
Subscribe now

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Explore related subjects

Discover the latest articles and news from researchers in related subjects, suggested using machine learning.

References

  • Altschul S.F., Gish W., Miller W., Myers E.W. & Lipman D.J. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403–410.

    Article  CAS  PubMed  Google Scholar 

  • Arnold K., Bordoli L., Kopp J. & Schwede T. 2006. The SWISS-MODEL workspace: A web-based environment for protein structure homology modeling. Bioinformatics 22: 195–201.

    Article  CAS  PubMed  Google Scholar 

  • Appelhagen I., Thiedig K., Nordholt N., Schmidt N., Huep G., Sagasser M. & Weisshaar B. 2014. Update on transparent testa mutants from Arabidopsis thaliana: characterisation of new alleles from an isogenic collection. Planta 240: 955–970.

    Article  CAS  PubMed  Google Scholar 

  • Crowhurst R.N., Gleave A.P., MacRae E.A., Ampomah-Dwamena C., Atkinson R.G., Beuning L.L., Bulley S.M., Chagne D., Marsh K.B., Matich A.J., and other 3. authors. 2008. Analysis of expressed sequence tags from Actinidia: applications of a cross species EST data base for gene discovery in the areas of flavor, health, color and ripening. BMC Genomics 9(1): 351.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Dastmalchi M. & Dhaubhadel S. 2015. Soybean chalcone isomerase: evolution of the fold, and the differential expression and localization of the gene family. Planta 241(2): 507–523.

    Article  CAS  PubMed  Google Scholar 

  • Davies K.M., Bloor S.J., Spiller G.B. & Demies S.C. 1998. Production of yellow color in flowers: redirection of flavonoid biosynthesis in Petunia. Plant J. 13: 259–266.

    Article  CAS  Google Scholar 

  • Ferreyra F.M.L., Rius S.P. & Casati P. 2012. Flavonoids: biosynthesis, biological functions, and biotechnological applications. Front. Plant Sci. 3. 222.

    Google Scholar 

  • Fraser L.G., Seal A.G., Monteflori M., McGhie T.K., Tsang G.K., Datson P.M., Hilario E., Marsh H.E., Dunn J.K., Hellens R.P., Davies K.M., McNeilage M.A., De Silva H.N. & Allan A.C. 2013. An R2R3 MYB transcription factor determines red petal colour in an Actinidia (kiwifruit) hybrid population. BMC Genomics 14. 28.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gong H.J., Li J.W., Jiang Q.S., Zhang J.C. & Ye K.Y. 2012. Analysis on the characteristics of the dominant community of rare and endangered plant Actinidia chrysantha. J. Zhejiang A & F University 29(2): 301–306.

    Google Scholar 

  • Grotewold E. 2006. The genetics and biochemistry of floral pigments. Annu. Rev. Plant Biol. 57: 761–780.

    Article  CAS  PubMed  Google Scholar 

  • Hartmann U., Sagasser M., Mehrtens F., Stracke R. & Weisshaar B. 2005. Differential combinatorial interactions of cis-acting elements recognized by R2R3-MYB, BZIP, and BHLH factors control light responsive and tissue-specific activation of phenylpropanoid biosynthesis genes. Plant Mol. Biol. 57: 155–171.

    Article  CAS  PubMed  Google Scholar 

  • Hassan S. & Mathesius U. 2012. The role of flavonoids in root—rhizospheresignalling: opportunities and challenges for improving plant-microbe interactions. J. Exp. Bot. 63. 3429–3444.

    Article  CAS  PubMed  Google Scholar 

  • Higo K., Ugawa Y., Iwamoto M. & Korenaga T. 1999. Plant exacting regulatory DNA elements (PLACE) database. Nucleic Acids Res. 27: 297–300.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Huang, H.W. & Ferguson A.R. 2007. Genetic resources of kiwifruit: domestication and breeding. Horticul. Rev. 33: 1–121.

    Google Scholar 

  • Jez J.M., Bowman M.E., Dixon R.A. & Noel J.P. 2000. Evolution of the chalcone isomerase fold from fatty-acid binding to stereospecific catalysis; nature, structure and mechanism of the evolutionarily unique plant enzyme chalcone isomerase. Nat. Struct. Mol. Biol. 7: 786–791.

    Article  CAS  Google Scholar 

  • Jiang W., Yin Q., Wu R., Zheng G., Liu J., Dixon R.A. & Pang Y. 2015. Role of a chalcone isomerase-like protein in flavonoid biosynthesis in Arabidopsis thaliana. J. Exp. Bot. 66. 7165–7179.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lai B., Li X.J., Hu B., Qin Y.H., Huang X.M., Wang H.C. & Hu G.B. 2014. LcMYBl is a key determinant of differential an-thocyanin accumulation among genotypes, tissues, developmental phases and ABA and light stimuli in Litchi chinensis. PLoS ONE 9 (1): e86293. doi:10.1371/journal.pone.0086293.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Lescot M., Ddhais P., Thijs G., Marchai K., Moreau Y., van de Peer Y., Rouzd P. & Rombauts S. 2002. PlantCARE: A database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res. 30: 325–327.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lin-Wang K., Micheletti D., Palmer J., Volz R., Lozano L., Espley R., Hellens R.P., Chagne D., Rowan D.D., Troggio M., Iglesias I. & Allan A.C. 2011. High temperature reduces apple fruit colour via modulation of the anthocyanin regulatory complex. Plant Cell Environ. 34: 1176–1190.

    Article  PubMed  CAS  Google Scholar 

  • Liu S., Lv Y., Wan X.R., Li L.M. Hu B. & Li L. 2014. Cloning and expression analysis of cDNAs encoding ABA 8’-hydroxylase in peanut plants in response to osmotic stress. PLoS ONE 9(5), e97025. doi:10.1371/journal.pone.0097025.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Morita Y., Takagi K., Fukuchi-Mizutani M., Ishiguro K., Tanaka Y., Nitasaka E., Nakayama M., Saito N., Kagami T., Hoshino A. & Iida S. 2014. A chalcone isomerase-like protein enhances flavonoid production and flower pigmentation. Plant J. 78: 294–304.

    Article  CAS  PubMed  Google Scholar 

  • Muir S., Collins G., Robinson S., Hughes S., Bovy A., DeVos C., vanTunen A. & Verhoeyen M. 2001. Overexpression of petunia chalcone isomerase in tomato results in fruit containing increased levels of flavonols. Nat. Biotechnol. 19: 470–474.

    Article  CAS  PubMed  Google Scholar 

  • Müller P.Y., Janovjak H., Miserez A.R. & Dobbie Z. 2002. Processing of gene expression data generated by quantitative real-time RT-PCR. Biotechniques 32: 1372–1379.

    PubMed  Google Scholar 

  • Ngaki M.N., Louie G.V., Philippe R.N., Manning G., Pojer F., Bowman M.E., Li L., Larsen E., Wurtele E.S. & Noel J.P. 2012. Evolution of the chalcone isomerase fold from fatty-acid binding to stereospecific catalysis. Nature 485(7399): 530–533.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Przysiecka Ł., Ksiazkiewicz M., Wolko B. & Naganowska B. 2015. Structure, expression profile and phylogenetic inference of chalcone isomerase-like genes from the narrow-leafed lupin (Lupinus angustifolius L.) genome. Front. Plant Sci. 6: 268. doi: 10.3389/fpls.2015.00268.

    Article  PubMed  PubMed Central  Google Scholar 

  • Ralston L., Subramanian S., Matsuno M. & Yu O. 2005. Partial reconstruction of flavonoid and isoflavonoid biosynthesis in yeast using soybean type I and type II chalcone isomerases. Plant Physiol. 137: 1375–1388.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Saito N., Tatsuzawa F., Hoshino A., Abe Y., Ichimura M., Yokoi M., Toki K., Morita Y., Iida S. & Honda T. 2011. Anthocyanin pigmentation controlled by speckled and c-1 mutations of Japanese morning glory. J. Jpn. Soc. Hort. Sci. 80: 452–460.

    Article  CAS  Google Scholar 

  • Saito R., Fukuta N., Ohmiya A., Itoh Y., Ozeki Y., Kuchitsu K. & Nakayama M. 2006. Regulation of anthocyanin biosynthesis involved in formation of marginal picotée petals in Petunia. Plant Sci. 170: 828–834.

    Article  CAS  Google Scholar 

  • Schwede T., Kopp J., Guex N. & Peitsch M.C. 2003. SWISS-MODEL: An automated protein homology-modeling server. Nucleic Acids Res. 31: 3381–3385.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Shen X., Zhao K., Liu L., Zhang K., Yuan H., Liao X., Wang Q., Guo X., Li F. & Li T. 2014. A role for PacMYBA in ABA-regulated anthocyanin biosynthesis in red colored sweet cherry cv. Hong Deng (Prunus avium, L.). Plant Cell Physiol. 55: 862–880.

    Article  CAS  PubMed  Google Scholar 

  • Shimada N., Aoki T., Sato S., Nakamura Y., Tabata S. & Ayabe S. 2003. A cluster of genes encodes the two types of chalcone isomerase involved in the biosynthesis of general flavonoids and legume-specific 5-deoxy (iso) flavonoids in Lotus japonica. Plant Physiol. 131: 941–951.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Tamura K., Dudley J., Nei M. & Kumar S. 2007. MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596–1599.

    Article  CAS  PubMed  Google Scholar 

  • Tanaka Y., Sasaki N. & Ohmiya A. 2008. Biosynthesis of plant pigments: anthocyanins, betalains and carotenoids. Plant J. 54: 733–749.

    Article  CAS  PubMed  Google Scholar 

  • Varkonyi-Gasic E., Moss S.M., Voogd C., Wu R., Lough R.H., Wang Y.Y. & Hellens R.P. 2011. Identification and characterization of flowering genes in kiwifruit: sequence conservation and role in kiwifruit flower development. BMC Plant Biol. 11: 72–86.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Wan X. & Li L. 2005. Molecular cloning and characterization of a dehydration-inducible cDNA encoding a putative 9 cis-epoxycarotenoid dioxygenase in Arachis hypogaea L. DNA Seq. 16: 217–223.

    Article  CAS  PubMed  Google Scholar 

  • Wan X. & Li L. 2006. Regulation of ABA level and water-stress tolerance of Arabidopsis by ectopic expression of a peanut 9 cis-epoxycarotenoid dioxygenase gene. Biochem. Biophys. Res. Commun. 347: 1030–1038.

    Article  CAS  PubMed  Google Scholar 

  • Winkel-Shirley B. 2001. Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology. Plant Physiol. 126: 485–493.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Xie X.B., Li S., Zhang R.R., Zhao J., Chen Y.C., Zhao Q., Yao Y.X., You C.X., Zhang X.S. & Hao Y.J. 2012. The bHLH transcription factor MdbHLH3 promotes anthocyanin accumulation and fruit colouration in response to low temperature in apples. Plant Cell Environ. 35: 1884–1897.

    Article  CAS  PubMed  Google Scholar 

  • Yonekura-Sakakibara K., Fukushima A., Nakabayashi R., Hanada K., Matsuda F., Sugawara S., Inoue E., Kuromori T., Ito T., Shinozaki K. Wangwattana B., Yamazaki M. & Saito K. 2012. Two glycosyltransferases involved in anthocyanin modification delineated by transcriptome independent component analysis in Arabidopsis thaliana. Plant J. 69: 154–167.

    Article  CAS  PubMed  Google Scholar 

  • Yonekura-Sakakibara K., Tohge T., Matsuda F., Nakabayashi R., Takayama H., Niida R., Watanabe-Takahashi A., Inoue E. & Saito K. 2008. Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis. Plant Cell 20. 2160–2176.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Zeng M.H., Liu S.H., Yang M.X., Zhang Y.J., Liang J.Y., Wan X.R. & Liang H. 2013. Characterization of a gene encoding clathrin heavy chain in maize up-regulated by salicylic acid, abscisic acid and high boron supply. Int. J. Mol. Sci. 14: 15179–15198.

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Zhang H., Liu J., Lu, H. & Gao S. 2009. Enhanced flavonoid production in hairy root cultures of Glycyrrhiza uralensis Fisch by combining the over-expression of chalcone isomerase gene with the elicitation treatment. Plant Cell Rep. 28: 1205–1213.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Hong Liang.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Yang, M., Li, J., Ye, C. et al. Characterization and expression analysis of a chalcone isomerase-like gene in relation to petal color of Actinidia chrysantha. Biologia 72, 753–763 (2017). https://doi.org/10.1515/biolog-2017-0084

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1515/biolog-2017-0084

Key words