Skip to main content
Log in

Coincidence in map positions between pathogen-induced defense-responsive genes and quantitative resistance loci in rice

  • Published:
Science in China Series C: Life Sciences Aims and scope Submit manuscript

Abstract

Quantitative disease resistance conferred by quantitative trait loci (QTLs) is presumably of wider spectrum and durable. Forty-four cDNA clones, representing 44 defense-responsive genes, were fine mapped to 56 loci distributed on 9 of the 12 rice chromosomes. The locations of 32 loci detected by 27 cDNA clones were associated with previously identified resistance QTLs for different rice diseases, including blast, bacterial blight, sheath blight and yellow mottle virus. The loci detected by the same multiple-copy cDNA clones were frequently located on similar locations of different chromosomes. Some of the multiple loci detected by the same clones were all associated with resistance QTLs. These results suggest that some of the genes may be important components in regulation of defense responses against pathogen invasion and they may be the candidates for studying the mechanism of quantitative disease resistance in rice.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Roumen, E. C., A strategy for accumulating genes for partial resistance to blast disease in rice within a conventional breeding program, in Rice Blast Disease (eds. Zeigler, R. S., Leong, S. A., Teng, P. S.), Cambridge: CAB International, 1994, 245–265.

    Google Scholar 

  2. Wang, G. -L., Mackill, D. J., Bonman, M. et al., RFLP mapping of genes conferring complete and partial resistance to blast in a durably resistant rice cultivar, Genetics, 1994, 136: 1421–1434.

    PubMed  CAS  Google Scholar 

  3. Li, Z., Pinson, S. R. M., Marchetti, M. A. et al., Characterization of quantitative trait loci (QTLs) in cultivated rice contributing to field resistance to sheath blight (Rhizoctonia solani), Theor. Appl. Genet., 1995, 91: 382–388.

    CAS  Google Scholar 

  4. Albar, L., Lorieux, M., Ahmadi, N. et al., Genetics basis and mapping of the resistance to rice yellow mottle virus (I)— QTLs identification and relationship between resistance and plant morphology, Theor. Appl. Genet., 1998, 97: 1145–1154.

    Article  CAS  Google Scholar 

  5. Li, Z. -K., Luo, L. J., Mei, H. W. et al., A “defeated” rice resistance gene acts as a QTL against a virulent strain of Xanthomonas oryzae pv. oryzae, Mol. Gen. Genet., 1999, 261: 58–63.

    Article  PubMed  CAS  Google Scholar 

  6. Zhou, B., Peng, K., Chu, Z. et al., The defense-responsive genes showing enhanced and repressed expression after pathogen infection in rice (Oryza sativa L.), Science in China, Ser. C., 2002, 45(5): 449–468.

    Article  CAS  Google Scholar 

  7. Wang, J., Liu, K. D., Xu, C. G. et al., The high level of wide-compatibility of ‘Dular’ has a complex genetic basis, Theor. Appl. Genet., 1998, 97: 407–412.

    Article  CAS  Google Scholar 

  8. Wang, S., Wang, J., Jiang, J. et al., Mapping of centromeric regions on the molecular linkage map of rice (Oryza sativa L.) using centromere-associated sequences, Mol. Gen. Genet., 2000, 263: 165–172.

    Article  PubMed  CAS  Google Scholar 

  9. Xing, Y. Z., Tan, Y. F., Hua, J. P. et al., Characterization of the main effects, epistatic effects and their environmental interactions of QTLs in the genetic basis of yield traits in rice, Theor. Appl. Genet., 2002, 105: 248–257.

    Article  PubMed  CAS  Google Scholar 

  10. Liu, K. D., Wang, J., Li, H. B. et al., A genome-wide analysis of wide compatibility in rice and the precise location of the S5 locus in the molecular map, Theor. Appl. Genet., 1997, 95: 809–814.

    Article  CAS  Google Scholar 

  11. Lincoln, S., Daly, M., Lander, E., Constructing Genetic Maps with Mapmaker/Exp 3.0, 3rd ed., Massachusetts: Whitehead Institute Technical Report, 1992.

    Google Scholar 

  12. Altschul, S. F., Madden, T. L., Schaffer, A. A. et al., Gapped BLAST and PSI-BLAST: A new generation of protein database search programs, Nucleic Acids Res., 1997, 25: 3389–3402.

    Article  PubMed  CAS  Google Scholar 

  13. Wang, Z., Taramino, G., Yang, D. et al., Rice ESTs with disease-resistance gene- or defense-response gene-like sequences mapped to regions containing major resistance genes or QTLs, Mol. Genet. Genomics, 265: 302–310.

  14. Luo, L., Mei, H., Zhao, X. et al., RFLP mapping and race specificity of bacterial blight resistance genes (QTLs) in rice, Science in China, Ser. C., 1998, 41: 542–547.

    Article  CAS  Google Scholar 

  15. Spaner, D., Shugar, L. P., Choo, T. M. et al., Mapping of disease resistance loci in barley on the basis of visual assessment of naturally occurring symptoms, Crop Sci., 1998, 38: 843–850.

    Google Scholar 

  16. Faris, J. D., Li, W. L., Liu, D. J. et al., Candidate gene analysis of quantitative disease resistance in wheat, Theor. Appl. Genet, 1999, 98: 219–225.

    Article  CAS  Google Scholar 

  17. Wu, J., Kurata, N., Tanoue, H. et al., Physical mapping of duplicated genomic regions of two chromosome ends in rice, Genetics, 1998, 150: 1595–1603.

    PubMed  CAS  Google Scholar 

  18. Wang, S., Liu, N., Peng, K. et al., The distribution and copy number of copia-like retrotransposons in rice (Oryza sativa L.) and their implications in the organization and evolution of the rice genome, Proc. Natl. Acad. Sci. USA, 1999, 96: 6824–6828.

    Article  PubMed  CAS  Google Scholar 

  19. Wang, S., Liu, K., Zhang, Q., Segmental duplications are common in rice genome, Acta Botanica Sinica, 2001, 42: 1150–1155.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sniping Wang.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Xiong, M., Wang, S. & Zhang, Q. Coincidence in map positions between pathogen-induced defense-responsive genes and quantitative resistance loci in rice. Sci. China Ser. C.-Life Sci. 45, 518–526 (2002). https://doi.org/10.1360/02yc9057

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1360/02yc9057

Keywords

Navigation