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Methods for the measurement of a bacterial enzyme activity in cell lysates and extracts

  • Brendan P. Burns
  • George L. Mendz
  • Stuart L. Hazell
Open Access
Article

Abstract

The kinetic characteristics and regulation of aspartate carbamoyltransferase activity were studied in lysates and cell extracts of Helicobacter pylori by three different methods. Nuclear magnetic resonance spectroscopy, radioactive tracer analysis, and spectrophotometry were employed in conjunction to identify the properties of the enzyme activity and to validate the results obtained with each assay. NMR spectroscopy was the most direct method to provide proof of ACTase activity; radioactive tracer analysis was the most sensitive technique and a microtitre-based colorimetric assay was the most cost-and time-efficient for large scale analyses. Freeze-thawing was adopted as the preferred method for cell lysis in studying enzyme activity in situ. This study showed the benefits of employing several different complementary methods to investigate bacterial enzyme activity.

Keywords

Nuclear Magnetic Resonance Antipyrine Nuclear Magnetic Resonance Spectroscopy Biological Procedure Carbamoyl Phosphate 
These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

References

  1. 1.
    Stryer, L. 1988. Biochemistry (3rd Ed). W.H. Freeman & Co: New York.Google Scholar
  2. 2.
    Jost, P.C., and Griffith O.H. 1982. Lipid-protein interactions. Vol 1. John Wiley & Sons: New York.Google Scholar
  3. 3.
    Coakley, W., Brown, R.C., and James, C.J. 1973. The inactivation of enzymes by ultrasonic cavitation at 20 kHz. Arch. Biochim. Biophys. 159, 722–729.CrossRefGoogle Scholar
  4. 4.
    Burns, B.P., Hazell S.L., and Mendz, G.L. 1997. In situ properties of aspartate carbamoyltransferase activity in Helicobacter pylori. Arch. Biochem. Biophys. 347, 119–125.PubMedCrossRefGoogle Scholar
  5. 5.
    IARC. 1994. Schistosomes, liver fluke and Helicobacter pylori. Abst. IARC Monographs on the Evaluation of Carcinogenic Risks to Humans, vol. 61, pp. 177–240. Lyon: International Agency for Research on Cancer, World Health Organisation.Google Scholar
  6. 6.
    Lee, A., Fox, J., and Hazell, S. 1993. Pathogenicity of Helicobacter pylori: a perspective. Infect. Immun. 61, 1601–1610.PubMedGoogle Scholar
  7. 7.
    Gerhart, J. C., and Pardee, A. B. 1962. The enzymology of control by feedback inhibition. J. Biol. Chem. 237, 891–896.PubMedGoogle Scholar
  8. 8.
    Mori, M., Ishida, H., and Tatibana, M. 1975. Aggregation and catalytic properties of the multienzyme complex catalyzing the initial steps of pyrimidine biosynthesis in rat liver. Biochemistry 14, 2622–2630.PubMedCrossRefGoogle Scholar
  9. 9.
    Else, A. J., and Hervé, G. 1990. A microtitre plate assay for aspartate transcarbamylase. Anal. Biochem. 186, 219–221.PubMedCrossRefGoogle Scholar
  10. 10.
    Prescott, L. M., and Jones, M. E. 1969. Modified methods for the determination of carbamoyl aspartate. Anal. Biochem. 32, 408–419.PubMedCrossRefGoogle Scholar
  11. 11.
    Allen, C. M., and Jones, M. E. 1964. Decomposition of carbamoyl phosphate in aqueous solutions. Biochemistry 3, 1238–1247.PubMedCrossRefGoogle Scholar
  12. 12.
    Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227, 680–685.PubMedCrossRefGoogle Scholar
  13. 13.
    Lopez, P., and Burgos, J. 1995. Lipoxygenase inactivation by manothermosonication: effects of sonication physical parameters, pH, KCl, sugars, glycerol, and enzyme concentration. J. Agric. Food Chem. 43, 620–625.CrossRefGoogle Scholar
  14. 14.
    Furth, A.J. 1975. Purification and properties of a constitutive β-lactamase from Pseudomonas aeruginosa strain dalgleish. Bioch. Biophys. Acta. 377, 431–443.Google Scholar
  15. 15.
    Diffley, P. and Jayawardena, A.N. 1982. Comparitive analysis of procedures used to isolate variant antigen from Trypanosoma brucei rhodesien. J. Parasitol. 68, 532–537.PubMedCrossRefGoogle Scholar
  16. 16.
    Mendz, G. L., Jimenez, B. M., Hazell, S. L., Gero, A. M., and O’Sullivan, W. J. 1994. De novo synthesis of pyrimidine nucleotides by Helicobacter pylori. J. App. Bacteriol. 77, 1–8.Google Scholar
  17. 17.
    Mendz, G.L., Hazell, S.L. and Burns, B.P. 1994. Evidence for the Entner-Duodoroff Pathway in Helicobacter pylori. Arch. Biochem. Biophys. 312, 349–356.PubMedCrossRefGoogle Scholar
  18. 18.
    Burns, B.P., Hazell, S.L. and Mendz, G.L. 1995. Acetyl Coenzyme A carboxylase Activity in Helicobacter pylori and the requirement of increased carbon dioxide for growth. Microbiology 141, 3113–3118.PubMedCrossRefGoogle Scholar

Copyright information

© Springer 1998

Authors and Affiliations

  • Brendan P. Burns
    • 1
  • George L. Mendz
    • 2
  • Stuart L. Hazell
    • 1
  1. 1.School of Microbiology and ImmunologyThe University of New South WalesSydneyAustralia
  2. 2.School of Biochemistry and Molecular GeneticsThe University of New South WalesSydneyAustralia

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