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Table 1 Genetic diversity parameters estimated with 20 microsatellite loci in 29 Portuguese and Spanish goat populations

From: The Southwestern fringe of Europe as an important reservoir of caprine biodiversity

Population Acronym N/Herds Census MNA Arf He ± SD Ho ± SD FIS NA HWEd
Spain
 Pirenaicaa PIR 18/4 1627d 6.60 ± 2.50 5.49 0.695 ± 0.043 0.654 ± 0.027 0.061 0.041 0
 Moncaínaa MON 32/5 2693d 7.10 ± 3.09 5.34 0.687 ± 0.048 0.626 ± 0.020 0.091* 0.048 2
 Azpi Gorria AZ 40/13 1607d 6.70 ± 2.81 4.71 0.659 ± 0.039 0.634 ± 0.017 0.039 0.024 0
 Blanca de Rasqueraa RAS 40/5 5000d 6.25 ± 2.81 4.57 0.634 ± 0.050 0.586 ± 0.017 0.077* 0.040 1
 Guadarrama GUAD 11/3 9212d 4.50 ± 2.21 0.611 ± 0.062 0.551 ± 0.038 0.105 0.039 0
 Retinta RET 15/3 2307d 5.61 ± 2.40 0.688 ± 0.042 0.677 ± 0.029 0.017 0.026 0
 Verata VERA 28/5 8738d 6.50 ± 2.54 4.78 0.654 ± 0.045 0.537 ± 0.022 0.182* 0.077 3
 Blanca Andaluza BLANCA 40/6 8642d 6.65 ± 2.62 4.93 0.665 ± 0.041 0.631 ± 0.017 0.052 0.031 0
 Celtibérica CELTIB 40/6 7904d 7.15 ± 2.66 5.01 0.663 ± 0.042 0.621 ± 0.017 0.064 0.030 0
 Blanca Celtibérica BC 30/4 <100 6.55 ± 2.26 4.90 0.652 ± 0.044 0.574 ± 0.021 0.123* 0.064 0
 Malagueña MALAG 40/15 40,872d 6.80 ± 2.88 5.06 0.683 ± 0.041 0.627 ± 0.017 0.083* 0.042 0
 Murciano-Granadina MG 40/15 99,335d 6.6 0 ± 2.37 4.96 0.655 ± 0.049 0.615 ± 0.017 0.062* 0.031 0
 Florida FLO 40/19 24,249d 7.25 ± 3.01 5.22 0.697 ± 0.036 0.666 ± 0.017 0.045 0.024 0
 Payoya PAY 36/5 6905d 6.40 ± 3.14 4.89 0.672 ± 0.041 0.674 ± 0.017 −0.003 0.024 0
 Negra Serrana SER 40/5 4715d 6.35 ± 2.62 4.62 0.657 ± 0.037 0.605 ± 0.017 0.080* 0.045 3
 Formenterab FOR 11/3 225d,g 4.20 ± 1.61 4.04 0.598 ± 0.051 0.558 ± 0.034 0.070 0.035 0
 Pitiusab IB 40/10 6.35 ± 2.39 4.71 0.652 ± 0.045 0.573 ± 0.017 0.124* 0.061 1
 Mallorquinab MALL 40/10 236d 6.80 ± 2.61 4.77 0.649 ± 0.040 0.600 ± 0.017 0.077* 0.047 1
 Ajuíc AJ 40/- 1700d 5.85 ± 2.28 4.44 0.651 ± 0.029 0.618 ± 0.017 0.052 0.034 1
 Majorerac MFV 40/10 12,832d 6.60 ± 2.89 4.63 0.637 ± 0.038 0.612 ± 0.017 0.039 0.027 0
 Palmerac PAL 40/5 9158d 4.15 ± 1.53 3.24 0.497 ± 0.038 0.507 ± 0.018 −0.020 0.020 0
 Tenerife Nortec TFN 40/5 4705d,g 5.30 ± 2.47 4.04 0.603 ± 0.037 0.588 ± 0.018 0.026 0.031 0
 Tenerife Surc TFS 40/8 6.00 ± 2.58 4.16 0.595 ± 0.037 0.590 ± 0.017 0.009 0.012 0
Portugal
 Bravia BR 39/39 9768e 5.95 ± 2.54 4.31 0.632 ± 0.046 0.621 ± 0.017 0.017 0.018 0
 Serpentina SP 30/17 4816e 6.80 ± 3.21 4.94 0.671 ± 0.045 0.618 ± 0.020 0.080* 0.043 0
 Algarvia AL 30/29 3991e 6.35 ± 2.62 4.75 0.681 ± 0.036 0.647 ± 0.020 0.052 0.036 0
 Charnequeira CH 29/10 4403e 6.40 ± 2.33 4.94 0.685 ± 0.034 0.655 ± 0.020 0.044 0.038 0
 Serrana SR 29/26 18,607e 6.90 ± 2.83 5.00 0.674 ± 0.042 0.601 ± 0.020 0.110* 0.049 1
 Preta de Montesinho PM 37/13 707e 6.75 ± 2.79 4.84 0.669 ± 0.043 0.563 ± 0.019 0.160* 0.068 1
Average   34   6.24 4.71 0.65 0.61 0.039   
  1. N/Herds sample size and herds, MNA mean number of alleles, Ar allelic richness, H e expected heterozygosity, H o observed heterozygosity, SD standard deviation, F IS within-breed inbreeding coefficient and significance (* P < 0.001), NA frequency of null alleles, HWEd number of loci not complying with Hardy–Weinberg equilibrium within-breed (P < 0.001)
  2. aBreeds from the Pyrenean area
  3. bBreeds from the Balearic Islands
  4. cBreeds from the Canary Islands
  5. d https://aplicaciones.magrama.es/arca-webapp/flujos.html?_flowId=catalogoRazas-flow&_flowExecutionKey=e1s (Census at 12/31/2014 considering registered animals)
  6. e http://www.dgv.min-agricultura.pt/xeov21/attachfileu.jsp?look_parentBoui=3820310&att_display=n&att_download=y (Census at 12/31/2014 considering registered animals)
  7. fAllelic richness per locus and population was based on a minimum sample size of nine diploid individuals. The amount of data was not sufficient to calculate allelic richness for Guadarrama and Retinta breeds
  8. gBoth populations are registered in the same herdbook