Abstract
The results of long-term author’s studies of the optical and complex-forming properties of more than 30 synthetic low-molecular-weight fluorophores specific for DNA are described. These studies made it possible to significantly expand the already existing database of properties of such compounds, clarify the ideas about the patterns linking the mentioned properties of fluorophores with their structure, and formulate recommendations on designing new effective DNA-specific fluorophores. The results of these studies can be used, in particular, in the development of new rapid methods for diagnosing various diseases, biotesting of probiotic and antibiotic properties of various products and wastes, etc.
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REFERENCES
Sibirtsev, V.S., Garabadzhiu, A.V., and Ivanov, S.D., Mechanisms of changes in the fluorescent properties of bisbenzimidazole dyes, Bioorg. Khim., 1995, vol. 21, no. 9, pp. 731–736.
Sibirtsev, V.S., Garabadzhiu, A.V., and Ivanov, S.D., Spectral properties of bisbenzimidazole dyes upon interaction with DNA, Russ. J. Bioorg. Chem., 1997, vol. 23, no. 12, pp. 857–866.
Sibirtsev, V.S. and Garabadzhiu, A.V., Effect of heteroatom on the spectral properties of benzazoles, Russ. J. Org. Chem., 1997, vol. 33, no. 12, pp. 1756–1759.
Sibirtsev, V.S., Glibin, E.N., and Ivanov, S.D., Variation of spectral properties of actinocin derivatives due to equilibrium transformations, Russ. J. Org. Chem., 2000, vol. 36, no. 12, pp. 1812–1818.
Sibirtsev, V.S., Garabadzhiu, A.V., and Ivanov, S.D., Comparative study of DNA-specific dyes of the indole and benzimidazole series, Russ. J. Bioorg. Chem., 2001, vol. 27, no. 1, pp. 57–66. https://doi.org/10.1023/A:1009535320077
Sibirtsev, V.S., Tolmachev, A.Yu., Suslov, V.V., Garabadzhiu, A.V., and Traven’, V.F., Dependence of fluorescence properties of compounds from psoralen, angelicin, and carbazole series on the character of their terminal substituents, Russ. J. Org. Chem., 2003, vol. 39, no. 6, pp. 881–889. https://doi.org/10.1023/B:RUJO.0000003169.96393.1d
Sibirtsev, V.S., Study of applicability of the bifunctional system “Ethidium bromide + Hoechst-33258” for DNA analysis, Biochemistry (Moscow), 2005, vol. 70, no. 4, pp. 449–457. https://doi.org/10.1007/s10541-005-0136-x
Sibirtsev, V.S., Tolmachev, A.Yu., Kovaleva, M.V., Garabadzhiu, A.V., and Traven’, V.F., Spectral study of interactions of 4,8,4'-trimethylpsoralen and 4,4'-dimethylangelicin dyes with DNA, Biochemistry (Moscow), 2005, vol. 70, no. 7, pp. 822–832. https://doi.org/10.1007/s10541-005-0190-4
Sibirtsev, V.S. and Garabadzhiu, A.V., Fluorestsentnye DNK-zondy: vvedenie v teoriyu i praktiku ispol’zovaniya (Fluorescent DNA Probes: Introduction in the Theory and Practice of Use), St. Petersburg: NOU Ekspress, 2006.
Sibirtsev, V.S., Fluorescent DNA probes: study of mechanisms of changes in spectral properties and features of practical application, Biochemistry (Moscow), 2007, vol. 72, no. 8, pp. 887–900. https://doi.org/10.1134/S0006297907080111
Sibirtsev, V.S. and Garabadzhiu, A.V., Spectral study of the interaction of DNA with benzothiazolyl-benz-a-chromene, Biochemistry (Moscow), 2007, vol. 72, no. 8, pp. 901–909. https://doi.org/10.1134/S0006297907080123
Sibirtsev, V.S., Investigation of mechanisms of change in spectral properties during interaction of benzazole, indole, and phenanthridium compounds with DNA, J. Opt. Technol., 2017, vol. 84, no. 5, pp. 294–301. https://doi.org/10.1364/JOT.84.000294
Sibirtsev, V.S., Biological test methods based on fluorometric genome analysis, J. Opt. Technol., 2017, vol. 84, no. 11, pp. 787–791. https://doi.org/10.1364/JOT.84.000787
ACKNOWLEDGMENTS
This work is dedicated to the memory of Academician of the Russian Academy of Sciences Professor V.I. Shvets, who until the last days of his life took an active part in the studies described here, but unfortunately, due to the sudden death, did not see this work finally completed.
Special thanks are due to Professor V.F. Traven’.
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Translated by M. Batrukova
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Sibirtsev, V.S., Garabadgiu, A.V. & Shvets, V.I. Fluorescent DNA Probes: Study of Properties and Methods of Application. Dokl Biochem Biophys 489, 403–406 (2019). https://doi.org/10.1134/S1607672919060127
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DOI: https://doi.org/10.1134/S1607672919060127