Abstract
Bacterial communities from the soils of cryptogamic barrens in the Thala Hills and Larsemann Hills oases of East Antarctica were examined. The total number of bacteria in the studied soils was no higher than 108 cells per gram of soil, which is an order of magnitude lower than the values typically found in the soils of temperate regions. The portion of viable cells reached 60% and more, which attests to the high tolerance of the bacteria to the impact of adverse environmental factors. The maximum values of the total number and viability of the bacteria were found in the fine earth material immediately under the stony pavement. For the first time, the high content of the filterable forms of bacteria (FFB) was found. In some of the samples, their portion reaches 70–80% of the total number of bacterial cells. Data on the high numbers and viability of the bacterial cells and on the phylogenetic and morphological diversity of FFB allow us to attribute the latter to the pool of bacterial cells ensuring their preservation under unfavorable environmental conditions. The concentrations and total pools of bacterial biomass in the studied soils are much lower than those in the zonal soils of temperate regions. Bacterial communities in the studied soils combine the high tolerance toward the adverse environmental factors (as seen from the high portion of viable cells, the formation of the nanoforms of bacteria, and the participation of bacteria in the subaerial biofilms) with the low total number and biomass of the bacterial cells
Similar content being viewed by others
Explore related subjects
Discover the latest articles and news from researchers in related subjects, suggested using machine learning.References
E. V. Abakumov, Soils of Western Antarctica (St. Petersburg State University, St. Petersburg, 2011) [in Russian].
A. A. Abramov, V. A. Mironov, A. V. Lupachev, D. G. Fyodorov-Davydov, S. V. Goryachkin, N. S. Mergelov, A. I. Ivashchenko, V. V. Lukin, and D. A. Gilichinsky, Geocryological conditions of Antarctic oases, in Polar Cryosphere and Inland Waters. Contribution of Russia to the International Polar Year 2007/2008, Ed. by V. M. Kotlyakov (Paulsen Editions, Moscow, 2011), pp. 233–244.
A. V. Golovchenko, N. G. Dobrovol’skaya, and L. I. Inisheva, “Structure and stocks of microbial biomass in oligotrophic peat bogs of the southern taiga in Western Siberia,” Eurasian Soil Sci. 35(12), 1296–1301 (2002).
A. V. Golovchenko, D. G. Zvyagintsev, and E. Yu. Tikhonova, “Abundance, biomass, structure, and activity of the microbial complexes of minerotrophic and ombrotrophic peatlands,” Microbiology (Moscow) 76(5), 630–637 (2007).
S. V. Goryachkin, D. A. Gilichinsky, N. S. Mergelov, D. E. Konyushkov, A. V. Lupachev, A. A. Abramov, A. V. Dolgikh, and E. P. Zazovskaya, “Antarctic soils: first results, problems, and prospects of studies,” in Geochemistry of Landscapes and Geography of Soils (to 100 Anniversary of M.A. Glazovskaya (Moscow, 2012), pp. 361–388.
V. I. Duda, N. E. Suzina, V. N. Polivtseva, and A. M. Boronin, “Ultramicrobacteria: Formation of the concept and contribution of ultramicrobacteria to biology,” Microbiology (Moscow) 81(4), 379–390 (2012).
N. A. Kryazhevskikh, E. V. Demkina, V. F. Gal’chenko, G. I. El’-Registan, N. A. Manucharova, and V. S. Soina, “Reactivation of dormant and nonculturable bacterial forms from paleosoils and subsoil permafrost,” Microbiology (Moscow) 81(4), 435–445 (2012).
L. V. Lysak, M. S. Kadulin, I. A. Konova, E. V. Lapygina, A. V. Ivanov, and D. G. Zvyagintsev, “Population number, viability, and taxonomic composition of the bacterial nanoforms in iron-manganic concretions,” Eurasian Soil Sci. 46(6), 668–675 (2013).
L. V. Lysak, E. V. Lapygina, I. A. Konova, and D. G. Zvyagintsev, “Population density and taxonomic composition of bacterial nanoforms in soils of Russia,” Eurasian Soil Sci. 43(7), 765–770 (2010).
L. V. Lysak, E. V. Lapygina, M. S. Kadulin, and I. A. Konova, “Number, viability, and diversity of the filterable forms of prokaryotes in sphagnous high-moor peat,” Biol. Bull. 41(3), 228–232 (2014).
N. A. Manucharova, Hydrolytic Prokaryotic Complexes of Terrestrial Ecosystems (Universitetskaya Kniga, Moscow, 2014) [in Russian].
N. A. Manucharova, Identification of Soil Prokaryotes with Active Metabolism by Fluorescence in Situ Hybridization (FISH) (Moscow State University, Moscow, 2010) [in Russian].
N. S. Mergelov, “Soils of wet valleys in the Larsemann Hills and Vestfold Hills oases (Princess Elizabeth Land, East Antarctica),” Eurasian Soil Sci. 47(9), 845–862 (2014).
N. S. Mergelov, S. V. Goryachkin, I. G. Shorkunov, E. P. Zazovskaya, and A. E. Cherkinsky, “Endolithic pedogenesis and rock varnish on massive crystalline rocks in East Antarctica,” Eurasian Soil Sci. 45(10), 901–917 (2012).
Handbook on Soil Biochemistry and Microbiology, Ed. by D. G. Zvyagintsev (Moscow State University, Moscow, 1991) [in Russian].
V. V. Nikonov, N. V. Lukina, L. M. Polyanskaya, O. A. Fomicheva, L. G. Isaeva, and D. G. Zvyagintsev, “Population and biomass of microorganisms in soils of pyrogenic succession in the northern taiga pine forests,” Eurasian Soil Sci. 39(4), 433–442 (2006).
V. S. Soina, A. G. Gazimullina, N. S. Mergelov, L. V. Lysak, and E. V. Lapygina, “Bacterial complexes in soils of humid valleys of Larsemann Hill oases (East Antarctica),” Al’m. Sovrem. Nauki Obraz., No. 9, 195–200 (2012).
V. S. Soina, L. V. Lysak, I. A. Konova, E. V. Lapygina, and D. G. Zvyagintsev, “Study of ultramicrobacteria (Nanoforms) in soils and subsoil deposits by electron microscopy,” Eurasian Soil Sci. 45(11), 1048–1056 (2012).
O. A. Fomicheva, L. M. Polyanskaya, D. G. Zvyagintsev, V. V. Nikonov, N. V. Lukina, M. A. Orlova, and L. G. Isaeva, “Population and biomass of soil microorganisms in old-growth primary spruce forests in the Northern Taiga,” Eurasian Soil Sci. 39(12), 1323–1331 (2006).
R. I. Amann, W. Ludwig, and K.-H. Schleifer, “Phylogenetic identification and in situ detection of individual microbial cells without cultivation,” Microbiol. Rev. 59, 143–169 (1995).
U. Brehm, A. Gorbushina, and D. Mottershead, “The role of microorganisms and biofilms in the breakdown and dissolution of quartz and glass,” Palaeogeogr., Palaeoclimatol., Palaeoecol. 219(1–2), 117–129 (2005).
R. E. Cameron, R. B. Hanson, G. N. Lacy, and F. A. Morelli, “Soil microbial and ecological investigations in the Antarctic interior,” Antarct. J. U.S. 5, 87–88 (1970).
A. De los Ríos, J. Wierzchos, L. Sancho, and C. Ascaso, “Acid microenvironments in microbial biofilms of Antarctic endolithic microecosystems,” Environ. Microbiol. 5(4), 231–237 (2003).
E. I. Friedmann, “Endolithic microorganisms in the Antarctic cold desert,” Science 215, 1045–1053 (1982).
E. I. Friedmann, “The Antarctic cold desert and the search for traces of life on Mars,” Adv. Space Res., 265–268 (1986).
E. I. Friedmann, D. A. Gilichinsky, G. Wilson, V. Ostroumov, E. A. Vorobyova, V. S. Soina, V. Sherbakova, T. A. Vishnivetskaya, J. Chanton, O. Friedman, C. P. McKay, and E. Rivkina, “Viable bacteria, methane, and high ice content in Antarctic permafrost, relevance to Mars,” in ISSOL’96, 8th ISSOL Meeting, 11th International Conference on the Origin of Life, Orleans, France, July 5–12, 1996, p. 45.
D. A. Gilichinsky, G. S. Wilson, E. I. Friedmann, et al., “Microbial populations in Antarctic permafrost: biodiversity, state, age and implication for astrobiology,” Astrobiology 7(2), 275–311 (2007).
D. Gilichinsky, E. Abakumov, A. Abramov, D. Fyodorov-Davydov, S. Goryachkin, A. Lupachev, N. Mergelov, and E. Zazovskaya, “Soils of Mid and Low Antarctic: diversity, geography, temperature regime,” in Proceedings of the 19th World Congress of Soil Science. Symposium WG 1.4, “Cold Soils in a Changing World” (Brisbane, Australia, 2010), pp. 32–35.
A. Gorbushina, “Life on the rocks,” Environ. Microbiol. 9(7), 1613–1631 (2007).
LIVE/DEAD BacLight Bacterial Viability Kits (L 7012) Instruction Manual with Appendix, (Molecular Probes Inc., 2004), pp. 1–8.
L. V. Lysak, E. V. Lapygina, and I. A. Konova, “Assessment of physiological state of bacteria in the soil,” Eurasian Soil Sci. 42(13), Suppl. 1, 1521–1525 (2009).
N. S. Panikov, “Contribution of nanosized bacteria to the total biomass and activity of soil microbial community,” Adv. Appl. Microbiol. 57, 245–296 (2005).
K. Ravenschlang, K. Sahm, and R. Amann, “Quantitative molecular analysis of the microbial community in arctic Sediments (Svalbard),” Appl. Environ. Microbiol. 67(1), 387–395 (2001).
D. I. Sharif, J. Gallon, C. J. Smith, and E. Dudley, “Quorum sensing in cyanobacteria: N-octanoylhomoserine lactone release and response, by the epilithic colonial cyanobacterium Gloeothece PCC6909,” ISME J. 2, 1171–1182 (2008).
F. C. Ugolini and R. L. Starkey, “Soils and microorganisms from Mt. Erebus, Antarctica,” Nature 211, 440–441 (1966).
B. Velimirov, “Nanobacteria, ultramicrobacteria and starvation forms: a search for the smallest metabolizing bacterium,” Microb. Environ. 16(12), 67–77 (2001).
H. S. Vishniac, “The microbiology of Antarctic soils,” in Antarctic Microbiology, Ed. by E. J. Friedmann (Wiley, New York, 1993).
E. Yergeau, K. K. Newsham, D. A. Pearce, and G. A. Kowaichuk, “Patterns of bacterial diversity across a range of Antarctic terrestrial habitats,” Environ. Microbiol. 9, 2670–2676 (2007).
X. Zeng, X. Xiao, and F. Wang, “Response of bacteria in the deep-sea sediments and the Antarctic soils to carbohydrates: effects on ectoenzyme activity and bacterial community,” J. Environ. Sci. (China) 22(11), 1779 (2010).
Y. G. Wang and J. Zhao, “Element distribution at Stornes Peninsula, Larsemann Hills, East Antarctica,” Jidi Yanjiu 9(4), 283–288 (1997).
Author information
Authors and Affiliations
Corresponding author
Additional information
Original Russian Text © A.G. Kudinova, L.V. Lysak, V.S. Soina, N.S. Mergelov, A.V. Dolgikh, I.G. Shorkunov, 2015, published in Pochvovedenie, 2015, No. 3, pp. 317–329.
Rights and permissions
About this article
Cite this article
Kudinova, A.G., Lysak, L.V., Soina, V.S. et al. Bacterial communities in the soils of cryptogamic barrens of East Antarctica (the Larsemann Hills and Thala Hills oases). Eurasian Soil Sc. 48, 276–287 (2015). https://doi.org/10.1134/S1064229315030072
Received:
Published:
Issue Date:
DOI: https://doi.org/10.1134/S1064229315030072


