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Variation in the COI gene of the freshwater pearl mussel Margaritifera margaritifera from River Vuokkijoki

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Abstract

The freshwater pearl mussel Margaritifera margaritifera L. is one of the most endangered freshwater mussels in the world. Effective conservation of threatened species requires not only ecological, but also genetic information from the target species and populations. Since low genetic diversity can reduce the ability of a species to adapt to environmental changes, maintaining genetic diversity has been identified as one of the key elements in successful conservation programs. We examined genetic variation of the freshwater pearl mussel from the River Vuokkijoki, Karelia, Russia. We sequenced a fragment of the cytochrome c oxidase subunit I gene (COI) from 22 individuals and compared the data to 32 previously published COI sequences available in GenBank. We identified 10 different COI haplotypes in the sequenced samples, three of which had not been previously reported. Our results show that the River Vuokkijoki has high genetic diversity and suggest that the colonization of this northern freshwater pearl mussel population might have occurred from multiple and even distant refugia. Therefore, the freshwater pearl mussel population of the River Vuokkijoki is valuable for the conservation of the whole species.

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References

  • Araujo, R. and Ramos, M.A., Action Plan for Margaritifera margaritifera in Europe, Council of Europe, Strasbourg: Council Europe Pub., 2000, vol. T-PVS.

    Google Scholar 

  • Bauer, G., Reproductive strategy of the freshwater pearl mussel Margaritifera margaritifera, J. Animal. Ecol., 1987, vol. 56, pp. 691–704.

    Article  Google Scholar 

  • Bauer, G., Threats to the freshwater pearl mussel in Central Europe, Biol. Conserv., 1988, vol. 45, pp. 239–253.

    Article  Google Scholar 

  • Beasley, C.R., Roberts, D., and Mackie, T.G., Does the freshwater pearl mussel, Margaritifera margaritifera L., face extinction in Northern Ireland?, Aquat. Conserv.: Mar. Freshwater Ecosyst., 1998, vol. 8, pp. 265–272.

    Google Scholar 

  • Berg, D.J., Haag, W.R., Guttman, S.I., and Sickel, J.B., Mantle biopsy: a technique for non-destructive tissue-sampling of freshwater mussels, J. North Amer. Benthologic. Soc., 1995, vol. 14, pp. 577–581.

    Article  Google Scholar 

  • Bouza, C., Castro, J., Martines, P., Amaro, R., Fernandes, C., Ondina, P., Outeiro, A., and San Miguel, E., Threatened freshwater pearl mussel Margaritifera margaritifera L. in NWSpain: low and very structured genetic variation in southern peripheral populations assessed using microsatellite markers, Conserv. Genet., 2007, vol. 8, pp. 937–948.

    Article  CAS  Google Scholar 

  • Cosgrove, P.J., Young, M.R., Hastie, L.C., and Gaywood, M., and Boonp, P.J., The status of the freshwater pearl mussel Margaritifera margaritifera Linn. in Scotland, Aquat. Conserv.: Mar. Freshwater Ecosyst., 2000, vol. 10, pp. 197–208.

    Article  Google Scholar 

  • Folmer, O., Black, M., Hoeh, W., Lutz, R., and Vrijenhoek, R., DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates, Mol. Mar. Biol. Biotech., 1994, vol. 3, pp. 294–299.

    CAS  Google Scholar 

  • Frankham, R., Ballou, J.D., and Briscoe, D.A., Introduction to Conservation Genetics, Cambridge: Cambr. Univ. Press, 2002.

    Book  Google Scholar 

  • Geist, J., Strategies for the conservation of endangered freshwater pearl mussels (Margaritifera margaritifera L.): a synthesis of conservation genetics and ecology, Hydrobiologia, 2010, vol. 644, pp. 69–88.

    Article  Google Scholar 

  • Geist, J. and Kuehn, R., Genetic diversity and differentiation of central European freshwater pearl mussel (Margaritifera margaritifera L.) populations: implications for conservation and management, Mol. Ecol., 2005, vol. 14, pp. 425–439.

    Article  CAS  PubMed  Google Scholar 

  • Geist, J. and Kuehn, R., Host-parasite interactions in oligotrophic stream ecosystem: the roles of life-history strategy and ecological niche, Mol. Ecol., 2008, vol. 17, pp. 997–1008.

    Article  PubMed  Google Scholar 

  • Geist, J., Röttmann, O., Schroder, W., and Kuhn, R., Development of microsatellite markers for the endangered freshwater pearl mussel Margaritifera margaritifera L. (Bivalvia: Unionoidea), Mol. Ecol. Notes, 2003, vol. 3, pp. 444–446.

    Article  CAS  Google Scholar 

  • Geist, J., Söderberg, H., Karlberg, A., and Kuehn, R., Drainage-independent genetic structure and high genetic diversity of endangered freshwater pearl mussels (Margaritifera margaritifera) in Northern Europe, Conserv. Genet., 2010, vol. 11, pp. 1339–1350.

    Article  Google Scholar 

  • Hasegawa, M., Kishino, K., and Yano, T., Dating of the human-ape splitting by a molecular clock of mitochondrial DNA, J. Mol. Evol., 1985, vol. 22, pp. 160–174.

    Article  CAS  PubMed  Google Scholar 

  • Helama, S. and Valovirta, I., The oldest recorded animal in Finland: ontogenetic age and growth in Margaritifera margaritifera (L. 1758) based on internal shell increments, Mem. Soc. Fauna Flora Fenn., 2008, vol. 84, pp. 20–30.

    Google Scholar 

  • Ieshko, E.P., Larson, B.M., Pavlov, Y.L., Barskaya, Y.Y., Lebedeva, D.I., and Novohatskaya, O.V., Population dynamics of glochidia of the freshwater pearl mussel Margaritifera margaritifera L., parasitizing on juvenile salmonidae fishes in northern water reservoirs, Biol. Bull., 2009, vol. 36, no. 6, pp. 624–629.

    Google Scholar 

  • Ieshko, E.P., Geist, J., Murzina, S.A., Veselov, A.E., Lebedeva, D.I., and Ziuganov, V.V., The characteristics of the infection of juvenile Atlantic salmon with glochidia of the freshwater pearl mussel in rivers of Northwest Russia, Knowledge Management Aquat. Ecosyst., 2016, vol. 6, p. 417.

    Google Scholar 

  • International Union for Conservation of Nature. The IUCN Red List of Threatened Species, 2014, Version 2014.3. www.iucnredlist.org (downloaded on May 6, 2015).

  • Jungbluth, J.R., Coomans, H.E., and Groh, H., Bibliographie der Flussperlmuschel Margaritifera margaritifera (Linn. 1785), in Verslagenen Technische Gegevens Institut voor Taxonomische Zoologie, Amsderdam: Univ. Amsderdam, 1985, pp. 1–220.

    Google Scholar 

  • Karlsson, S., Larsen, B.M., and Hindar, K., Host-dependent genetic variation in freshwater pearl mussel (Margaritifera margaritifera L.), Hydrobiologia, 2014, vol. 735, pp. 179–190.

    Article  Google Scholar 

  • Librado, P. and Rozas, J., DnaSP v5: a software for comprehensive analysis of DNA polymorphism data, Bioinformatics, 2009, vol. 25, pp. 1451–1452.

    Article  CAS  PubMed  Google Scholar 

  • Lopes-Lima, M., Sousa, R., Geist, J., Aldridge, D.C., Araujo, R., Bergengren, J., Bespalaya, Y., Bodis, E., Burlakova, L., Van Damme, D., Douda, K., Froufe, E., Georgiev, D., Gumpinger, C., Karatayev, A., Kebapçi, Ü., Killeen, I., Lajtner, J., Larsen, B.M., Lauceri, R., Legakis, A., Lois, S., Lundberg, S., Moorkens, E., Motte, G., Nagel, K.-O., Ondina, P., Outeiro, A., Paunovic, M., Prié, V., von Proschwitz, T., Riccardi, N., Rudzite, M., Rudzitis, M., Scheder, C., Seddon, M., Sereflisan, H., Simic, V., Sokolova, S., Stoeckl, K., Taskinen, J., Teixeira, A., Thielen, F., Trichkova, T., Varandas, S., Vicentini, H., Zajac, K., Zajac, T., and Zogaris, S., Conservation status of freshwater mussels in Europe: state of the art and future challenges, Biol. Rev., 2016. doi 10.1111/brv.12244

    Google Scholar 

  • Machordom, A., Araujo, R., Erpenbeck, D., and Ramos, M.-A., Phylogeography and conservation genetics of endangered European Margaritiferidae (Bivalvia: Unionoidea), Biol. J. Linn. Soc., 2003, vol. 78, pp. 235–252.

    Article  Google Scholar 

  • Makhrov, A.A., Ieshko, E.P., Shchurov, I.L., and Shirokov, V.A., Distribution of the freshwater pearl mussel (Margaritifera margaritifera) in the Republic of Karelia (North-West Russia), Toxicol. Environ. Chem., 2011, vol. 93, no. 9, pp. 1731–1747.

    Article  CAS  Google Scholar 

  • Makhrov, A., Bespalaya, Ju., Bolotov, I., Vikhrev, I., Gofarov, M., Alekseeva, Y., and Zotin, A., Historical geography of pearl harvesting and current status of populations of freshwater pearl mussel Margaritifera margaritifera (L.) in the western part of Northern European Russia, Hydrobiologia, 2014. doi 10.1007/s10750-013-1546-1

    Google Scholar 

  • McNeely, J.A., Miller, K.R., Reid, W.V., Mittermeier, R.A., and Werner, T.B., Conserving the World’s Biological Diversity, IUCN, Conserv. Int. WWF-US and the World Bank, Washington DC: World Res. Inst., 1990.

    Google Scholar 

  • Nucleotide. The Nucleotide database is a collection of sequences from several sources, including GenBank, Ref- Seq, TPA and PDB. Genome, gene and transcript sequence data provide the foundation for biomedical research and discovery, 2016. http://www.ncbi.nlm.nih.gov/nucleotide/.

  • Salonen, J.K., Marjomaki, T.J., and Taskinen, J., An alien fish threatens an endangered parasitic bivalve: the relationship between brook trout (Salvelinus fontinalis) and freshwater pearl mussel (Margaritifera margaritifera) in Northern Europe, Aquat. Conserv.: Mar. Freshwater Ecosyst., 2016. doi 10.1002/aqc.2614

    Google Scholar 

  • Tamura, K., Stecher, G., Peterson, D., Filipski, A., and Kumar, S., MEGA6: molecular evolutionary genetics analysis version 6.0, Mol. Biol. Evol., 2013, vol. 30, pp. 2725–2729.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Thompson, J.D., Higgins, G.D., and Gibson, T.J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, composition-specific gap penalties and weight matrix choice, Nucleic Acids Res., 1994, vol. 22, pp. 4673–4680.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Zjuganov, V.A., Zotin, A., Nezlin, L., and Tretiakov, V., The Freshwater Pearl Mussels and Their Relationships with Salmonid Fish, Moscow: VNIRO, 1994.

    Google Scholar 

Download references

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Correspondence to S. J. Välilä.

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Välilä, S.J., Knott, K.E., Ieshko, E.P. et al. Variation in the COI gene of the freshwater pearl mussel Margaritifera margaritifera from River Vuokkijoki. Biol Bull Russ Acad Sci 44, 92–98 (2017). https://doi.org/10.1134/S1062359017010150

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