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Differentiation of Asian North Chum Salmon (Oncorhynchus keta W.) Based on Microsatellite Markers

  • ANIMAL GENETICS
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Abstract

The study includes 41 sample sets of chum salmon from the northern part of its geographic range analyzed at ten microsatellite loci. In the northern part of the range of Asian chum salmon, the following groups of samples are clearly distinguished: “Magadan oblast,” “Northern Kamchatka,” “Penzhina River,” and “Anadyr River basin.” Populations of chum salmon from the Apuka River and the “Koryak Upland” group show low genetic differentiation from other groups. There is a positive relationship between the latitude and the average expected heterozygosity in this part of the range. Chum salmon of the Penzhina River shows close genetic relationship to chum salmon from the Anadyr River basin, probably because of gene flow.

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Notes

  1. North Pacific Anadromous Fish Commission.

  2. Hereinafter, the bootstrap interval is indicated in square brackets after the value of the differentiation coefficient: the first value is the lower bound and the second value is the upper bound of the bootstrap interval.

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Funding

This study was conducted within state assignment GS 0112-2019-0002 (subtheme “Ecological Genetic Structure of a Species”). Use of DNA markers for population differentiation was supported by the Russian Science Foundation, grant no. 19-16-00101; identification of population groups, including statistical methods, was supported by Russian Foundation for Basic Research, project no. 18-016-00033.

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Authors and Affiliations

  1. Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991, Moscow, Russia

    M. V. Shitova, T. A. Rakitskaya, V. D. Prohorovskaya, T. V. Malinina, D. V. Politov, K. I. Afanasyev, G. A. Rubtsova & L. A. Zhivotovsky

  2. Pacific Research Fishery Center, Chukotka Branch, 689000, Anadyr, Russia

    Yu. N. Khokhlov

  3. All-Russian Social Organization All-Russian Society of Nature Protection, Perm Region Department, 614025, Perm, Russia

    Yu. N. Khokhlov

  4. Moscow State Institute of International Relations, 119454, Moscow, Russia

    A. I. Nikiforov

  5. The Main Basin Department for Fisheries and Conservation of Aquatic Biological Resources, 115114, Moscow, Russia

    P. K. Afanasyev

  6. All-Russian Research Institute of Fisheries and Oceanography, 107140, Moscow, Russia

    S. Yu. Orlova, A. N. Elnikov, K. I. Afanasyev & L. A. Zhivotovsky

  7. Kamchatka Research Institute of Fisheries and Oceanography, 683000, Petropavlovsk-Kamchatsky, Russia

    A. V. Bugaev

Authors
  1. M. V. Shitova
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  2. Yu. N. Khokhlov
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  3. A. I. Nikiforov
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  4. P. K. Afanasyev
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  5. S. Yu. Orlova
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  6. A. N. Elnikov
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  7. A. V. Bugaev
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  8. T. A. Rakitskaya
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  9. V. D. Prohorovskaya
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  10. T. V. Malinina
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  11. D. V. Politov
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  12. K. I. Afanasyev
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  13. G. A. Rubtsova
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  14. L. A. Zhivotovsky
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Corresponding authors

Correspondence to M. V. Shitova or L. A. Zhivotovsky.

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Conflictof interest. The authors declare that they have no conflict of interest.

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Translated by A. Lisenkova

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Shitova, M.V., Khokhlov, Y.N., Nikiforov, A.I. et al. Differentiation of Asian North Chum Salmon (Oncorhynchus keta W.) Based on Microsatellite Markers. Russ J Genet 56, 706–717 (2020). https://doi.org/10.1134/S1022795420060113

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  • DOI: https://doi.org/10.1134/S1022795420060113

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