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Bioinformatic Analysis of the Sciatic Nerve Transcriptomes of Mice after 30-Day Spaceflight on Board the Bion-M1 Biosatellite

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Abstract

Comparative bioinformatic analysis of sciatic nerve transcriptomes of C57BL/6J mice was carried out. Animals were divided into three groups: Flight, 30-day spaceflight; Recovery, 30-day spaceflight with subsequent 7-day readaptation; and Control. A significant pool of genes with an absolute difference in expression of more than 32 times compared to the control group was revealed in mice after the 30-day spaceflight (Flight and Recovery groups). Comparative analysis of the Flight and Recovery groups of murine transcriptomes did not reveal any significant differences in gene expression. In animals after spaceflight on board the biosatellite, using the KEGG database (Kyoto Encyclopedia of Genes and Genomes), we identified genes related to the state of metabolic and signaling pathways involved in actin cytoskeleton regulation, regulation of potential-dependent calcium, sodium, and potassium channels, and myelination of nerve fibers.

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ACKNOWLEDGMENTS

We thank O.V. Tyapkina and K.A. Petrov for assistance in experiments.

This study was supported by the Russian Foundation for Basic Research grant no. 17-04-00385, the fundamental research program of the Presidium of the Russian Academy of Sciences “Basic Research for the Development of Biomedical Technologies,” and the subsidy allocated within the framework of state support of the Kazan (Volga Region) Federal University in order to increase its competitiveness among the world’s leading scientific and educational centers.

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Authors and Affiliations

  1. Department of Medical Biology and Genetics, Kazan State Medical University, 420012, Kazan, Russia

    M. S. Kuznetsov, A. N. Lisyukov & R. R. Islamov

  2. Department of Normal Anatomy, Kazan State Medical University, 420012, Kazan, Russia

    P. N. Rezvyakov

  3. OpenLab Extreme Biology, Kazan (Volga Region) Federal University, 420008, Kazan, Russia

    O. A. Gusev

  4. Translational Genomics Unit, 230-0045, Yokohama City, Riken, Japan

    O. A. Gusev

  5. Department of Medical and Biological Physics, Kazan State Medical University, 420012, Kazan, Russia

    E. E. Nikolskiy

  6. OpenLab Neuropharmacology, Kazan (Volga Region) Federal University, 420008, Kazan, Russia

    E. E. Nikolskiy

  7. Kazan Institute of Biochemistry and Biophysics, Kazan Scientific Center, Russian Academy of Sciences, 420111, Kazan, Russia

    E. E. Nikolskiy & R. R. Islamov

Authors
  1. M. S. Kuznetsov
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  2. P. N. Rezvyakov
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  3. A. N. Lisyukov
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  4. O. A. Gusev
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  5. E. E. Nikolskiy
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  6. R. R. Islamov
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Correspondence to M. S. Kuznetsov.

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Conflict of interests. The authors declare that they have no conflict of interest.

Statement on the welfare of animals. All applicable international, national, and/or institutional guidelines for the care and use of animals were followed.

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Translated by K. Lazarev

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Kuznetsov, M.S., Rezvyakov, P.N., Lisyukov, A.N. et al. Bioinformatic Analysis of the Sciatic Nerve Transcriptomes of Mice after 30-Day Spaceflight on Board the Bion-M1 Biosatellite. Russ J Genet 55, 388–392 (2019). https://doi.org/10.1134/S1022795419030104

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  • DOI: https://doi.org/10.1134/S1022795419030104

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