Skip to main content
Log in

Genetic relationships of Chukchi charr Salvelinus andriashevi and Taranetz charr Salvelinus taranetzi

  • Animal Genetics
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

On the basis of sequence analysis of the mitochondrial DNA (mtDNA) control region (CR), cytochrome b (Cytb), and cytochrome oxidase-1 (CoI) genes, the relationships of endemic species Salvelinus andriashevi Berg, 1948, represented by the only population from Lake Estikhed (Chukotka), were estimated. The data on the genealogical analysis of mtDNA haplotypes supported phylogenetic closeness of S. andriashevi and S. taranetzi. It was also demonstrated that the specimens of Chukchi charr, along with Salvelinus sp. 4 (Lake Nachikinskoe), S. krogiusae (Lake Dal’nee), S. boganidae and S. elgyticus (Lake El’gygytgyn), and S. a. erythrinus from Canada’s Northwest Territories (NWT) belonged to the Arctic group of Taranetz charr. The problem of coincidence of taxonomic differentiation of charrs of the genus Salvelinus based on morphological and genetic analyses is discussed.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Chereshnev, I.A., Volobuev, V.V., Shestakov, A.V., and Frolov, S.V., Lososevidnye ryby Severo-Vostoka Rossii (Salmonid Fishes of the Northeast of Russia), Vladivostok: Dal’nauka, 2002.

    Google Scholar 

  2. Chereshnev, I.A., Presnovodnye ryby Chukotki (Freshwater Fishes of Chukotka), Magadan: Severo-Vostochnyi Nauchnyi Tsentr, Dal’nevostochnoe Otdelenie, Rossiiskaya Akademiya Nauk, 2008.

    Google Scholar 

  3. Berg, L.S., About Chukchi charr (Salvelinus andriashevi Berg nov. sp.), Dokl. Akad. Nauk SSSR, 1948, vol. 49, no. 8, pp. 1495–1496.

    Google Scholar 

  4. Barsukov, V.V., Fishes of the Bay of Providence and adjacent waters of the Chukchi Peninsula, Tr. Zool. Inst. Akad. Nauk SSSR, 1958, vol. 25, pp. 131–163.

    Google Scholar 

  5. Barsukov, V.V., To the problem of the Chukchi char of the genus Salvelinus, Vopr. Ikhtiol., 1960, no. 14, pp. 3–17.

    Google Scholar 

  6. Glubokovskii, M.K., Chereshnev, I.A., Chernenko, E.V., and Viktorovskii, R.M., Distribution of charr (Salvelinus, Salmoniformes) of Arctic group on the Asian coast of the Pacific Ocean, in Sistematika i ekologiya ryb kontinental’nykh vodoemov Dal’nego Vostoka (Systematics and Ecology of Fishes of Continental Water Reservoirs of the Far East), Vladivostok: Dal’nevostochnyi Nauchnyi Tsentr, Akademiya Nauk SSS., 1979, pp. 86–98.

    Google Scholar 

  7. Chereshnev, I.A., Biologicheskoe raznoobrazie presnovodnoi ikhtiofauny severo-vostoka Rossii (Biological Diversity of the Freshwater Ichthyofauna of the Northeast of Russia), Vladivostok: Dal’nauka, 1996.

    Google Scholar 

  8. Frolov, S.V. and Frolova, V.N., Karyotype of a Chukchi char from Lake Estiched (east Chukotka), Biology and Evolution of Chars of the Northern Hemisphere (Proc. ISACF Workshop), Vladivostok: Dalnauka, 1998, p. 14.

    Google Scholar 

  9. Frolov, S.V. and Frolova, V.N., Karyotype of a Chukchi char from Lake Estiched (east Chukotka), Russ. J. Genet., 2001, vol. 37, no. 2, pp. 180–183.

    Article  CAS  Google Scholar 

  10. Omel’chenko, V.T., Salmenkova, E.A., Malinina, T.V., and Frolov, S.V., Genetic differentiation of sympatric populations of chars of the genus Salvelinus from the Achchen Lake (Chukotka), Russ. J. Genet., 1998, vol. 34, no. 3, pp. 311–316.

    Google Scholar 

  11. Oleinik, A.G., Molecular evolution of the chars of the genus Salvelinus: phylogeographical and phylogenetic aspects, Extended Abstract of Doctoral Dissertation, Institut Biologii Moria Dal’nevostochnogo Otdelenia, Rossiiskoi Akademii Nauk, Vladivostok, 2013.

    Google Scholar 

  12. Oleinik, A.G., Skurikhina, L.A., and Brykov, Vl.A., Phylogeny of charrs of the genus Salvelinus based on mitochondrial DNA data, Russ. J. Genet., 2015, vol. 51, no. 1, pp. 55–68. https://doi.org/10.1134/S1022795415010093.

    Article  CAS  Google Scholar 

  13. Alekseyev, S.S., Bajno, R., Gordeeva, N.V., et al., Phylogeography and sympatric differentiation of the Arctic charr Salvelinus alpinus (L.) complex in Siberia as revealed by mtDNA sequence analysis, J. Fish Biol., 2009, vol. 75, pp. 368–392.

    Article  CAS  PubMed  Google Scholar 

  14. Sambrook, J., Fritsch, E.F., and Maniatis, T., Molecular Cloning: A Laboratory Manual, New York: Cold Spring Harbor Lab. Press, 1989.

    Google Scholar 

  15. Crête-Lafrenière, A., Weir, L.K., and Bernatchez, L., Framing the Salmonidae family phylogenetic portrait: a more complete picture from increased taxon sampling, PLoS One, 2012, vol. 7, no. 10. e46662

    Article  PubMed  PubMed Central  Google Scholar 

  16. Yamamoto, S., Maekawa, K., Morita, K., et al., Phylogeography of a salmonid fish, Dolly Varden (Salvelinus malma): multiple glacial refugia in the north pacific rim, Zool. Sci., 2014, vol. 31, pp. 660–671.

    Article  PubMed  Google Scholar 

  17. Uiblein, F., Jagsch, A., Honsig-Erlenburg, W., and Weiss, S., Status, habitat use, and vulnerability of the European grayling in Austrian waters, J. Fish Biol., 2001, vol. 59, suppl. A, pp. 223–247.

    Google Scholar 

  18. Ward, R.D., Zemlak, T.S., Innes, B.H., et al., DNA barcoding Australia’s fish species, Philos. Trans. R. Soc., B., 2005, vol. 360, pp. 1847–1857.

    CAS  Google Scholar 

  19. Bandelt, H.-J., Foster, P., and Rohl, A., Median-joining networks for inferring intraspecific phylogenies, Mol. Biol. Evol., 1999, vol. 16, pp. 37–48.

    Article  CAS  PubMed  Google Scholar 

  20. Saitou, N. and Nei, M., The neighbor-joining method: a new method for reconstructing phylogenetic trees, Mol. Biol. Evol., 1987, vol. 4, pp. 406–425.

    CAS  PubMed  Google Scholar 

  21. Nei, M. and Kumar, S., Molecular Evolution and Phylogenetics, New York: Oxford Univ. Press, 2000.

    Google Scholar 

  22. Felsenstein, J., Confidence limits on phylogenies: an approach using the bootstrap, Evolution, 1985, vol. 39, pp. 783–791.

    Article  PubMed  Google Scholar 

  23. Kumar, S., Stecher, G., and Tamura, K., MEGA7: Molecular evolutionary genetics analysis version 7.0 for bigger datasets, Mol. Biol. Evol., 2016, vol. 33, pp. 1870–1874. doi 10.1093/molbev/msw054

    Article  CAS  PubMed  Google Scholar 

  24. Savvaitova, K.A., Arkticheskie gol’tsy (struktura populyatsionnykh sistem, perspektivy khozyaistvennogo ispol’zovaniya) (Arctic Charrs: Structure of Population Systems and Perspectives of Commercial Use), Moscow: Agropromizdat, 1989.

    Google Scholar 

  25. Brunner, P.C., Douglas, M.R., Osinov, A., et al., Holarctic phylogeography of Arctic charr (Salvelinus alpinus L.) inferred from mitochondrial DNA sequences, Evolution, 2001, vol. 55, no. 3, pp. 573–586.

    Article  CAS  PubMed  Google Scholar 

  26. Yamamoto, S., Morita, K., Kitano, S., et al., Phylogeography of white-spotted charr (Salvelinus leucomaenis) inferred from mitochondrial DNA sequences, Zool. Sci., 2004, vol. 21, pp. 229–240.

    Article  CAS  PubMed  Google Scholar 

  27. Oleinik, A.G., Skurikhina, L.A., and Brykov, V.A., Divergence of the Salvelinus species mitochondrial DNA from northeastern Asia, Ecol. Freshwater Fish., 2007, vol. 16, no. 1, pp. 87–98.

    Article  Google Scholar 

  28. Oleinik, A.G. and Skurikhina, L.A., Mitochondrial DNA diversity and relationships of endemic charrs of the genus Salvelinus from Lake Kronotskoye (Kamchatka Peninsula), Hydrobiologia, 2010, vol. 650, pp. 145–159.

    Article  CAS  Google Scholar 

  29. Osinov, A.G., Senchukova, A.L., Mugue, N.S., et al., Speciation and genetic divergence of three species of charr from ancient Lake El’gygytgyn (Chukotka) and their phylogenetic relationships with other representatives of the genus Salvelinus, Biol. J. Linn. Soc., 2015, vol. 116, no. 1, pp. 63–85.

    Article  Google Scholar 

  30. Rokas, A., Kruger, D., and Carroll, S.B., Animal evolution and the molecular signature of radiations compressed in time, Science, 2005, vol. 310, pp. 1933–1938.

    Article  PubMed  Google Scholar 

  31. Pavlov, D.S., Savvaitova, K.A., Gruzdeva, M.A., et al., Raznoobrazie ryb Taimyra (The Diversity of Fishes from Taimyr Peninsula), Moscow: Nauka, 1999.

    Google Scholar 

  32. Alekseev, S.S., Pichugin, M.Yu., and Samusenok, V.P., Diversity of Arctic charrs from Transbaikalia in meristic characters, their position in the complex of Salvelinus alpinus, and the origin of sympatric forms, J. Ichthyol., 2000, vol. 40, no. 4, pp. 279–297.

    Google Scholar 

  33. Osinov, A.G., Arctic charr Salvelinus alpinus from Transbaikalia and Taimyr: genetic differentiation and origin, J. Ichtyol., 2002, vol. 42, no. 2, pp. 141–151.

    Google Scholar 

  34. Osinov, A.G., Alekseev, S.S., and Kirilov, A.F., Arctic charr Salvelinus alpinus from Lake Ulakhan-Silyan-Kyuel’ (the Yana River basin): biology, morphology, genetics, and phylogeny, J. Ichtyol., 2003, vol. 43, no. 1, pp. 54–67.

    Google Scholar 

  35. Brunner, P.C., Douglas, M.R., and Bernatchez, L., Microsatellite and mitochondrial DNA assessment of population structure and stocking effects in Arctic charr Salvelinus alpinus (Teleostei: Salmonidae) from central Alpine lakes, Mol. Ecol., 1998, vol. 7, pp. 209–223.

    Article  CAS  Google Scholar 

  36. Salmenkova, E.A., Omel’ chenko, V.T., Radchenko, O.A., et al., Genetic divergence of chars of the genus Salvelinus from Kronotsky Lake (Kamchatka Peninsula), Russ. J. Genet., 2005, vol. 41, no. 8, pp. 896–906. doi 10.1007/s11177-005-0178-6

    Article  Google Scholar 

  37. Senchukova, A.L., Pavlov, S.D., Mel’nikova, M.N., and Myuge, N.S., Genetic differentiation of chars (genus Salvelinus) from Lake Kronotskoe based on analysis of mitochondrial DNA, J. Ichtyol., 2012, vol. 52, no. 6, pp. 389–399.

    Article  Google Scholar 

  38. Lindsey, C.C., Stocks are chameleons: plasticity in gill rakers of coregonid fishes, Can. J. Fish. Aquat. Sci., 1981, vol. 38, pp. 1497–1506.

    Article  Google Scholar 

  39. Kirpichnikov, V.S., Genetika i selektsiya ryb (Genetic Bases of Fish Selection), Leningrad: Nauka, 1987.

    Google Scholar 

  40. Snorrason, S.S., Skúlason, S., Jonsson, B., et al., Trophic specialization in Arctic charr Salvelinus alpinus (Pisces; Salmonidae): morphological divergence and ontogenetic niche shifts, Biol. J. Linn. Soc., 1994, vol. 52, pp. 1–18.

    Article  Google Scholar 

  41. Taylor, E.B., Species pairs of north temperate freshwater fish: evolution, taxonomy, and conservation, Rev. Fish Biol. Fish., 1999, vol. 9, pp. 299–324.

    Article  Google Scholar 

  42. Alekseyev, S.S., Samusenok, V.P., Matveev, A.N., and Pichugin, M.Y., Diversification, sympatric speciation, and trophic polymorphism of Arctic charr (Salvelinus alpinus complex) in Transbaikalia, Environ. Biol. Fishes, 2002, vol. 64, pp. 97–114.

    Article  Google Scholar 

  43. Garside, E.T., Development rate and vertebral number in salmonids, J. Fish. Res. Board Can., 1966, vol. 23, no. 10, pp. 1537–1551.

    Article  Google Scholar 

  44. Glubokovskii, M.K., Evolyutsionnaya biologiya lososevykh ryb (Evolutionary Biology of Salmonid Fishes), Moscow: Nauka, 1995.

    Google Scholar 

  45. Savvaitova, K.A., Gritsenko, O.F., Gruzdeva, M.A., and Kuzishchin, K.V., Life strategy and phenetic diversity of the chars from the genus Salvelinus in Chernoe Lake, Onekotan Island, the Kurile Islands, J. Ichtyol., 2000, vol. 40, no. 6, pp. 704–723.

    Google Scholar 

  46. Phillips, R.P., Matsuoka, M.P., Konon, I., and Reed, K.M., Phylogenetic analysis of mitochondrial and nuclear sequences supports inclusion of Acantholingua ohridana in the genus Salmo, Copeia, 2000, vol. 2, pp. 546–550.

    Article  Google Scholar 

  47. Snoj, A., Melkic, E., Suš nik, S., et al., DNA phylogeny supports revised classification of Salmothymus obtusirostris, Biol. J. Linn. Soc., 2002, vol. 77, pp. 399–411.

    Article  Google Scholar 

  48. Ilves, K.L. and Tailor, E.B., Evolutionary and biogeographical patterns within the smelt genus Hypomesus in the North Pacific Ocean, Biogeogr., 2008, vol. 35, pp. 48–64.

    Google Scholar 

  49. Ilves, K.L. and Tailor, E.B., Molecular resolution of the systematics of a problematic group of fishes (Teleostei: Osmeridae) and evidence for morphological homoplasy, Mol. Phylogenet. Evol., 2009, vol. 50, pp. 163–178.

    Article  CAS  PubMed  Google Scholar 

  50. Hyde, J.R. and Vetter, R.D., The origin, evolution, and diversification of rockfishes of the genus Sebastes (Cuvier), Mol. Phylogenet. Evol., 2007, vol. 44, pp. 790–811.

    Article  CAS  PubMed  Google Scholar 

  51. Ostbye, K., Amundsen, P.A., Bernatchez, L., et al., Parallel evolution of ecomorphological traits in the European whitefish Coregonus lavaretus (L.) species complex during postglacial times, Mol. Ecol., 2006, vol. 15, pp. 3983–4001.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to A. G. Oleinik.

Additional information

Original Russian Text © A.G. Oleinik, L.A. Skurikhina, A.D. Kukhlevsky, E.I. Bondar, 2017, published in Genetika, 2017, Vol. 53, No. 10, pp. 1208–1217.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Oleinik, A.G., Skurikhina, L.A., Kukhlevsky, A.D. et al. Genetic relationships of Chukchi charr Salvelinus andriashevi and Taranetz charr Salvelinus taranetzi . Russ J Genet 53, 1137–1145 (2017). https://doi.org/10.1134/S1022795417100076

Download citation

  • Received:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795417100076

Keywords

Navigation