Skip to main content

Advertisement

Log in

Population genetic structure of northern Dolly Varden char Salvelinus malma malma in Asia and North America

  • Animal Genetics
  • Published:
Russian Journal of Genetics Aims and scope Submit manuscript

Abstract

The level of genetic differentiation of northern Dolly Varden char Salvelinus malma malma from Asia and North America was evaluated using the data on mtDNA variation (regions ND1/ND2, ND5/ND6, and Cytb/D-loop) obtained by means of PCR-RFLP analysis. For S. m. malma, the mean values of haplo-type and nucleotide diversity were 0.5261 ± 0.00388 and 0.001558, respectively. The mean estimate of the population nucleotide divergence constituted 0.055%. It was demonstrated that S. m. malma on the most part of the species range examined (drainages of the Beaufort Sea, Chukotka Sea, Bering Sea, and the Sea of Okhotsk) was characterized by the population genetic structure with the low level of genetic differentiation and divergence. At the same time, populations from the Pacific Ocean Gulf of Alaska demonstrated marked genetic differentiation, supported by the high pairwise G4ST values (from 0.4198 to 0.5211) and nucleotide divergence estimates (mean divergence, 0.129%), from Asian and North American populations. Analysis of molecular variance (AMOVA) showed that most of the mtDNA variation in S. m. malma fell in the intrapopulation component (72.5%). At the same time, the differences between the populations (21.1%) and between the regions (6.4%) made lower contribution to the total variation.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Subscribe and save

Springer+
from $39.99 /Month
  • Starting from 10 chapters or articles per month
  • Access and download chapters and articles from more than 300k books and 2,500 journals
  • Cancel anytime
View plans

Buy Now

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Explore related subjects

Discover the latest articles and news from researchers in related subjects, suggested using machine learning.

References

  1. Chereshnev, I.A., Biologicheskoe raznoobrazie presnovodnoi ikhtiofauny severovostoka Rossii (Biological Diversity of Freshwater Ichtiofauna of the North-East of Russia), Vladivostok: Dal’nauka, 1996.

    Google Scholar 

  2. Hewitt, G.M., The Genetic Legacy of Quaternary Ice Ages, Nature, 2000, vol. 405, pp. 907–913.

    Article  PubMed  CAS  Google Scholar 

  3. Berg, L.S., Ryby presnykh vod SSSR i sopredel’nykh stran (Freshwater Fishes of the Soviet Union and Adjacent Countries), Moscow: Izd. Akad. Nauk SSSR, 1948, part 1, 4th ed.

    Google Scholar 

  4. Behnke, R.J., A Systematics Review of the Genus Salvelinus, Charrs, Salmonid Fishes of the Genus Salvelinus, Balon, E.K., Ed., Hague: Dr. W. Junk Publ., 1980, pp. 441–480.

    Google Scholar 

  5. Morrow, J.E., Analysis of the Dolly Varden Charr, Salvelinus malma, of Northwestern North America and Northeastern Siberia, Charrs, Salmonid Fishes of the Genus Salvelinus, Balon, E.K., Ed., Hague: Dr. W. Junk Publ., 1980, pp. 323–338.

    Google Scholar 

  6. Baxter, J.S., Taylor, E.B., Devlin, R.H., et al., Evidence for Natural Hybridization between Dolly Varden (Salvelinus malma) and Bull Trout (Salvelinus confluentus) in a Northcentral British Columbia Watershed, Can. J. Fish. Aquat. Sci., 1997, vol. 54, pp. 421–429.

    Article  Google Scholar 

  7. Behnke, R.J., Trout and Salmon of North America, New York: The Free Press, 2002.

    Google Scholar 

  8. Chereshnev, I.A., Fauna, Systematics, and Relationships of Freshwater Fishes of Eastern Chukotka, in Ekologiya i sistematika presnovodnykh organizmov Dal’nego Vostoka (Ecology and Systematics of Far East Freshwater Organisms), Vladivostok: Dalnevostochnyi nauchnyi tsentr Ross. Akad. Nauk SSSR, 1983, pp. 89–108.

    Google Scholar 

  9. Oleinik, A.G., Skurikhina, L.A., Brykov, Vl.A., et al., Differentiation of Dolly Varden Char Salvelinus malma from Asia and North America Inferred from PCRRFLP Analysis of Mitochondrial DNA, Russ. J. Genet., 2005, vol. 41, no. 5, pp. 501–508.

    Article  CAS  Google Scholar 

  10. Osinov, A.G., Evolutionary Relationships between the Main Taxa of the Salvelinus alpinus-Salvelinus malma Complex: Results of a Comparative Study of Allozyme Data from Different Authors, Vopr. Ikhtiol., 2001, vol. 41, no. 2, pp. 167–183.

    Google Scholar 

  11. Osinov, A.G., The Northern Form of Dolly Varden, Salvelinus malma, from Asia and North America: Allozyme Variation, Genetic Differentiation and Origin, Vopr. Ikhtiol., 2002, vol. 42, no. 5, pp. 664–677.

    Google Scholar 

  12. Osinov, A.G. and Pavlov, S.D., Allozyme Variation and Genetic Divergence of Arctic Char and Dolly Varden Populations (Salvelinus alpinus-S. malma Complex), Vopr. Ikhtiol., 1998, vol. 38, no. 1, pp. 47–61.

    Google Scholar 

  13. Brunner, P.C., Douglas, M.R., Osinov, A., et al., Holarctic Phylogeography of Arctic Char (Salvelinus alpinus L.) Inferred from Mitochondrial DNA Sequences, Evolution, 2001, vol. 55, pp. 573–586.

    Article  PubMed  CAS  Google Scholar 

  14. Oleinik, A.G., Skurikhina, L.A., and Brykov, Vl.A., Dolly Varden Charr: Phylogeography, Genetic Differentiation and Origin, Based on PCR-RFLP Analysis of Mitochondrial DNA, Computational Phylogenetics and Molecular Systematics: Commemorating the 50th Anniversary of Molecular Phylogenetics and Systematics in Russia (Proc. Conf., Moscow, 2007), Moscow, 2007, pp. 226–228.

  15. Redenbach, Z. and Taylor, E.B., Evidence for Historical Introgression along a Contact Zone between Two Species of Char (Pisces: Salmonidae) in Northwestern North America, Evolution, 2002, vol. 56, no. 5, pp. 1021–1035.

    PubMed  CAS  Google Scholar 

  16. Mann, D.H. and Hamilton, T.D., Late Pleistocene and Holocene Paleoenvironments of the North Pacific Coast, Quaternary Sci. Rev., 1995, vol. 14, pp. 449–471.

    Article  Google Scholar 

  17. DeCicco, A. and Reist, J., Distribution of Dolly Varden in Northern Bering and Chukotka Sea Drainages, a Provisional Organization, ISACF Inform. Ser., 1999, no. 7, pp. 13–18.

  18. Oleinik, A.G., Skurikhina, L.A., Brykov, Vl.A., et al., Mitochondrial DNA Divergence of Two Dolly Varden Char, Salvelinus malma (Salmonidae: Pisces) Subspecies, Dokl. Ross. Akad. Nauk, 2001, vol. 367, no. 6, pp. 844–846.

    Google Scholar 

  19. Oleinik, A.G., Skurikhina, L.A., and Brykov, Vl.A., The Divergence of the Dolly Varden Char Salvelinus malma in Asian Northern Pacific Population Inferred from the RCR-RFLP Analysis of Mitochondrial DNA, Russ. J. Genet., 2002, vol. 38, no. 10, pp. 1181–1188.

    Article  CAS  Google Scholar 

  20. Pustovoit, S.P., Genetic Variation and Interpopulation Differences of Dolly Varden Char, (Salvelinus malma Walb.), Genetika (Moscow), 1991, vol. 27, no. 1, pp. 106–112.

    Google Scholar 

  21. Crane, P.A., Seeb, L.W., and Seeb, J.E., Genetic Relationships among Salvelinus Species Inferred from Allozyme Data, Can. J. Fish. Aquat. Sci., 1994, vol. 51,suppl. 1, pp. 182–197.

    Article  CAS  Google Scholar 

  22. Crane, P.A., Lewis, C.J., Kretschmer, E.J., et al., Characterization and Inheritance of Seven Microsatellite Loci from Dolly Varden, Salvelinus malma, and Cross-Species Amplification in Arctic Char, S. alpinus, Conservation Genet., 2004, vol. 5, pp. 737–741.

    Article  Google Scholar 

  23. Crane, P., DeCicco, A., Spearman, W., and Wenburg, J., Genetic Diversity of Dolly Varden Populations in Norton and Kotzebue Sounds, Anchorage: US Fish and Wildlife Service, Office of Subsistence Management, Fisheries Resource Monitoring Program, Technical Report for Study 01-136, 2005.

    Google Scholar 

  24. Currens, K.P., Griswold, K.E., and Reeves, G.H., Relations between Dolly Varden Populations and between Coastal Cutthroat Trout Populations in Prince William Sound, Restoration Project 98145, Final Report, 2003.

  25. Everett, R.J., Wilmot, R.L., and Krueger, C.C., Population Genetic Structure of Dolly Varden from Beafourt Sea Drainages of Northern Alaska and Canada, Am. Fish. Soc. Symp., 1997, vol. 19, pp. 240–249.

    CAS  Google Scholar 

  26. Gharrett, A.J., Goto, A., and Yamazaki, F., A Note on the Genetic Contrast of Sympatric Dolly Varden (Salvelinus malma) and Arctic Charr (S. alpinus) in the Karluk River System, Alaska, Report of Overseas Work Supported by Grant-in Aid for Overseas Scientific Survey of the Ministry of Education, Science and Culture of Japan, during 1987–1990, Yamazaki, F., Ed., Hokodate: Hokkaido Univ., 1991, pp. 37–48.

    Google Scholar 

  27. Gordeeva, N., Chukova, E., and Oleinik, A., Microsatellite Genetic Variation of Asian Populations of Dolly Varden Char, Hydrobiologia, 2010, vol. 650, no. 1, pp. 133–144.

    Article  CAS  Google Scholar 

  28. Oleinik, A.G., Skurikhina, L.A., Frolov, S.V., et al., Differences between Two Subspecies of Dolly Varden, Salvelinus malma, Revealed by RFLP-PCR Analysis of Mitochondrial DNA, Environ. Biol. Fishes, 2004, vol. 69, pp. 449–459.

    Article  Google Scholar 

  29. Osinov, A.G., The Dolly Varden (Salvelinus malma) of Eurasia and the Chars of the Kamchatka River Basin: Data from Allozyme Analysis: Proc. 8th and 9th ISACF Workshops on Arctic Char, 1996 and 1998, ISACF Inform. Ser., 1999, no. 7, pp. 173–181.

  30. Reist, J.D., Johnson, J.D., and Carmichael, T.J., Morphological Variation in Charr from North-Western Canada-Salvelinus alpinus and Salvelinus malma, ISACF Inform. Ser., 1991, no. 5, pp. 135–145.

  31. Reist, J.D., Johnson, J.D., and Carmichael, T.J., Variation and Specific Identity of the Char from Northwestern Arctic Canada and Alaska, Fish Ecology in Arctic North America: American Fisheries Society Symposium 19, Reynolds, J., Ed., Bethesda, 1997, pp. 250–261.

  32. Nei, M., Analysis of Gene Diversity in Subdivided Populations, Proc. Natl. Acad. Sci. USA, 1973, vol. 70, pp. 3321–3323.

    Article  PubMed  CAS  Google Scholar 

  33. Nei, M., Molecular Evolutionary Genetics, New York: Columbia University Press, 1987.

    Google Scholar 

  34. Tajima, F., Evolutionary Relationship of DNA Sequences in Finite Populations, Genetics, 1983, vol. 105, pp. 437–460.

    PubMed  CAS  Google Scholar 

  35. McElroy, D., Moran, P., Bermingham, E., and Kornfield, I., REAP: An Integrated Environment for the Manipulation and Phylogenetic Analysis of Restriction Data, J. Hered., 1992, vol. 83, pp. 153–158.

    Google Scholar 

  36. Schneider, S., Roessli, D., and Excoffier, L., Arlequin ver 2.000: A Software for Population Genetic Data Analysis, Geneva: Univ. Geneva, 2000.

    Google Scholar 

  37. Roff, D. and Bentzen, P., The Statistical Analysis of Mitochondrial DNA Polymorphisms: Chi-Square and the Problem of Small Samples, Mol. Biol. Evol., 1989, vol. 5, pp. 539–545.

    Google Scholar 

  38. Zaykin, D.V. and Pudovkin, A.I., Two Programs to Estimate Significance of Chi-Square Values Using Pseudo-Probability Tests, J. Hered., 1993, vol. 84, p. 152.

    Google Scholar 

  39. Weir, B.S. and Cockerham, C.C., Estimating F-Statistics for the Analysis of Population Structure, Evolution, 1984, vol. 38, pp. 1358–1370.

    Article  Google Scholar 

  40. Excoffier, L., Smouse, P.E., and Quattro, J.M., Analysis of Molecular Variance Inferred from Metric Distances among DNA Haplotypes: Application to Human Mitochondrial DNA Restriction Data, Genetics, 1992, vol. 131, pp. 479–491.

    PubMed  CAS  Google Scholar 

  41. Nei, M. and Tajima, F., DNA Polymorphism Detectable by Restriction Endonucleases, Genetics, 1981, vol. 97, pp. 145–163.

    PubMed  CAS  Google Scholar 

  42. Nei, M. and Miller, J.C., A Simple Method for Estimating Average Number of Nucleotide Substitution within and between Populations from Restriction Date, Genetics, 1990, vol. 125, pp. 873–879.

    PubMed  CAS  Google Scholar 

  43. Avise, J.C., Phylogeography: The History and Formation of Species, London: Harvard Univ. Press;, 2000.

    Google Scholar 

  44. Churikov, D.Yu., Genealogy of Mitochondrial DNA Haplotypes among Several Species of Pacific Salmon, Extended Abstract of Cand. Sci. (Biol.) Dissertation, St. Petersburg: St. Petersburg State Univ., 2001, p. 17.

    Google Scholar 

  45. Churikov, D. and Gharrett, A.J., Comparative Phylogeography of the Two Pink Salmon Broodlines: An Analysis Based on a Mitochondrial DNA Genealogy, Mol. Evol., 2002, vol. 11, pp. 1077–1101.

    CAS  Google Scholar 

  46. Bernatchez, L., The Evolutionary History of Brown Trout (Salmo trutta L.) Inferred from Phylogeographic, Nested Clade, and Mismatch Analyses of Mitochondrial DNA Variation, Evolution, 2001, vol. 55, pp. 351–379.

    PubMed  CAS  Google Scholar 

  47. Oleinik, A.G., Skurikhina, L.A., and Chukova, E.I., Phylogeography of Southern Asian Dolly Varden Char Salvelinus malma krascheninnikovi: Genealogical Analysis of Mitochondrial DNA, Russ. J. Genet., 2010, vol. 46, no. 2, pp. 198–209.

    Article  CAS  Google Scholar 

  48. Yamamoto, S., Morita, K., Kitano, S., et al., Phylogeography of White-Spotted Charr (Salvelinus leucomaenis) Inferred from Mitochondrial DNA Sequences, Zool. Sci., 2004, vol. 21, pp. 229–240.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to A. G. Oleinik.

Additional information

Original Russian Text © A.G. Oleinik, L.A. Skurikhina, Vl.A. Brykov, 2011, published in Genetika, 2011, Vol. 47, No.12, pp. 1642–1654.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Oleinik, A.G., Skurikhina, L.A. & Brykov, V.A. Population genetic structure of northern Dolly Varden char Salvelinus malma malma in Asia and North America. Russ J Genet 47, 1456–1467 (2011). https://doi.org/10.1134/S1022795411110135

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1022795411110135

Keywords