Skip to main content
Log in

The R1 gene for late blight resistance in early and late maturing potato cultivars

  • Published:
Russian Journal of Plant Physiology Aims and scope Submit manuscript

Abstract

The method of polymerase chain reaction was used to amplify a fragment of the LZ-NBS-LRR receptor kinase gene R1; the gene was transferred into potato (Solanum tuberosum) from its wild-growing relative S. demissum and confers the race-specific recognition of the pathogen Phytophthora infestans. To verify this method as a test for the presence of the late blight resistance gene R1, the amplified genome fragment was cloned from the potato hybrid comprising the germplasm of S. demissum. The primary structure of this fragment, which corresponded to the receptor domain of kinase, did not practically differ from the matching sequence in S. demissum. In addition, the method was verified by scoring the set of plant differentials, wherein the presence of R1 was established with race-specific Phytophthora isolates. By screening 70 potato cultivars, we established a significant relationship between the presence of the gene R1 fragment and the phenotypic characters of late blight resistance and late maturity. This evidence supports the idea that R1 was introgressed from short-day S. demissum into potato plants together with some gene(s) conferring late transition to flowering.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

PCR:

polymerase chain reaction.

References

  1. Budin, K.Z., Geneticheskie osnovy selektsii kartofelya (Genetic Basics of Potato Breeding), Leningrad: Agropromizdat, 1986.

    Google Scholar 

  2. Ballvora, A., Ercolano, M.R., Weiss, J., Meksem, K., Bormann, C.A., Oberhagemann, P., Salamini, F., and Gebhardt, C., The R1 Gene for Potato Resistance to Late Blight (Phytophthora infestans) Belongs to the Leucine Zipper/NBS/LRR Class of Plant Resistance Genes, Plant J., 2002, vol. 30, pp. 361–371.

    Article  PubMed  CAS  Google Scholar 

  3. Huang, S., Vossen, E.A.G., Kuang, H., Vleeshouwers, V.G.A.A., Zhang, N., Borm, T.J.A., van Eck, H.J., Baker, B., Jacobsen, E., and Visser, R.G.F., Comparative Genomics Enabled the Isolation of the R3a Late Blight Resistance Gene in Potato, Plant J., 2005, vol. 42, pp. 251–261.

    Article  PubMed  CAS  Google Scholar 

  4. Kuang, H., Wei, F., Marano, M., Wirtz, U., Wang, X., Liu, J., Shum, W., Zaborsky, J., Tallon, L.J., Rensink, W., Lobst, S., Zhang, P., Tornqvist, C., Tek, A., Bamberg, J., Helgeson, J.P., Fry, W., You, F., Luo, M., Jiang, J., Buell, C., and Baker, B.J., The R1 Resistance Gene Cluster Contains Three Groups of Independently Evolving, Type I R1 Homologues and Shows Substantial Structural Variation among Haplotypes of Solanum demissum, Plant J., 2005, vol. 44, pp. 37–51.

    Article  PubMed  CAS  Google Scholar 

  5. Song, J., Bradeen, J.M., Naess, S.K., Raasch, J.A., Wielgus, S.M., Haberlach, G.T., Liu, J., Kuang, H., Austin-Phillips, S., Buell, C.R., Helgeson, J.P., and Jiang, J., Gene RB Cloned from Solanum bulbocastanum Confers Broad Spectrum Resistance to Potato Late Blight, Proc. Natl. Acad. Sci. USA, 2003, vol. 100, pp. 9128–9133.

    Article  PubMed  CAS  Google Scholar 

  6. Vossen, E.A.G., Sikkema, A., de Lintel, Hekkert, B., Gros, J., Stevens, P., Muskens, M., Wouters, D., Pereira, A., Stiekema, W., and Allefs, S., An Ancient R Gene from the Wild Potato Species Solanum bulbocastanum Confers Broad-Spectrum Resistance to Phytophthora infestans in Cultivated Potato and Tomato, Plant J., 2003, vol. 36, pp. 867–882.

    Article  PubMed  CAS  Google Scholar 

  7. Cannon, S., Zhu, H., Baumgarten, A., Spangler, R., May, G., Cook, D.R., and Young, N.D., Diversity, Distribution, and Ancient Taxonomic Relationships within the TIR and Non-TIR NBS-LRR Resistance Gene Subfamilies, J. Mol. Evol., 2002, vol. 54, pp. 548–562.

    Article  PubMed  CAS  Google Scholar 

  8. Fluhr, R., Sentinels of Disease. Plant Resistance Genes, Plant Physiol., 2001, vol. 127, pp. 1367–1374.

    Article  PubMed  CAS  Google Scholar 

  9. Gebhardt, C., Ballvora, A., Walkemeier, B., Oberhagemann, P., and Schüler, K., Assessing Genetic Potential in Germplasm Collections of Crop Plants by Marker-Trait Association: A Case Study for Potatoes with Quantitative Variation of Resistance to Late Blight and Maturity Type, Mol. Breed., 2004, vol. 13, pp. 93–102.

    Article  CAS  Google Scholar 

  10. Martínez-García, J.F., Virgós-Soler, A., and Prat, S., Control of Photoperiod-Regulated Tuberization in Potato by the Arabidopsis Flowering-Time Gene CONSTANS, Proc. Natl. Acad. Sci. USA, 2002, vol. 99, pp. 15211–15216.

    Article  PubMed  CAS  Google Scholar 

  11. Liu, J., Yu, J., McIntosh, L., Kende, H., and Zeevaart, J.A.D., Isolation of a CONSTANS Ortholog from Pharbitis nil and Its Role in Flowering, Plant Physiol., 2001, vol. 125, pp. 1821–1830.

    Article  PubMed  CAS  Google Scholar 

  12. Kim, S.J., Moon, J.H., Lee, I., Maeng, J., and Kim, S.R., Molecular Cloning and Expression Analysis of a CONSTANS Homologue, PnCOL1, from Pharbitis nil, J. Exp. Bot., 2003, vol. 54, pp. 1879–1887.

    Article  PubMed  CAS  Google Scholar 

  13. Drobyazina, P.E. and Khavkin, E.E., Homolog of APETALA1/FRUITFULL in Solanum Plants, Fiziol. Rast. (Moscow), 2006, vol. 53, pp. 243–249 (Russ. J. Plant Physiol., Engl. Transl., pp. 217–222).

    Google Scholar 

  14. Grünwald, N.J., Hinojosa, M.A.C., Covarrubias, O.R., Peña, A.R., Niederhauser, J.S., and Fry, W.E., Potato Cultivars from the Mexican National Program: Sources and Durability of Resistance against Late Blight, Phytopathology, 2002, vol. 92, pp. 688–693.

    PubMed  Google Scholar 

  15. Ellis, J., Dodds, P., and Pryor, T., Structure, Function and Evolution of Plant Disease Resistance Genes, Curr. Opin. Plant Biol., 2000, vol. 3, pp. 278–284.

    Article  PubMed  CAS  Google Scholar 

  16. Stokes, T.L., Kunkel, B.N., and Richards, E.J., Epigenetic Variation in Arabidopsis Disease Resistance, Genes Dev., 2002, vol. 16, pp. 171–182.

    Article  PubMed  CAS  Google Scholar 

  17. Mondragón-Palomino, M., Meyers, M.C., Michelmore, R.W., and Gaut, B.S., Patterns of Positive Selection in the Complete NBS-LRR Gene Family of Arabidopsis thaliana, Genome Res., 2002, vol. 12, pp. 1305–1315.

    Article  PubMed  CAS  Google Scholar 

  18. Baumgarten, A., Cannon, S., Spangler, R., and May, G., Genome-Level Evolution of Resistance Genes in Arabidopsis thaliana, Genetics, 2003, vol. 165, pp. 309–319.

    PubMed  CAS  Google Scholar 

  19. Rose, L.E., Bittner-Eddy, P.D., Langley, C.H., Holub, E.B., Michelmore, R.W., and Beynon, J.L., The Maintenance of Extreme Amino Acid Diversity at the Disease Resistance Gene, RPP13, in Arabidopsis thaliana, Genetics, 2004, vol. 166, pp. 1517–1527.

    Article  PubMed  CAS  Google Scholar 

  20. Mondragón-Palomino, M. and Gaut, B.S., Gene Conversion and the Evolution of Three Leucine-Rich Repeat Gene Families in Arabidopsis thaliana, Mol. Biol. Evol., 2005, vol. 22, pp. 2444–2456.

    Article  PubMed  CAS  Google Scholar 

  21. Caicedo, A.L. and Schaal, B.A., Heterogeneous Evolutionary Processes Affect R Gene Diversity in Natural Populations of Solanum pimpinellifolium, Proc. Natl. Acad. Sci. USA, 2004, vol. 101, pp. 17 444–17 449.

    CAS  Google Scholar 

  22. Rose, L.E., Langley, C.H., Bernal, A.J., and Michelmore, R.W., Natural Variation in the Pto Pathogen Resistance Gene within Species of Wild Tomato (Lycopersicon): 1. Functional Analysis of Pto Alleles, Genetics, 2005, vol. 171, pp. 345–357.

    Article  PubMed  CAS  Google Scholar 

  23. Collins, A.D., Ramsay, M.L., Meyer, R., Chatot-Balandras, C., Oberhagemann, P., de Jong, W., Gebhardt, C., Bonnel, E., and Waugh, R., QTL for Field Resistance to Late Blight in Potato Are Strongly Correlated with Maturity and Vigour, Mol. Breed., 1999, vol. 5, pp. 387–398.

    Article  CAS  Google Scholar 

  24. Visker, M.H.P.W., Keizer, L.C.P., van Eck, H.J., Jacobsen, E., Colon, L.T., and Struik, P.C., Can the QTL for Late Blight Resistance on Potato Chromosome 5 Be Attributed to Foliage Maturity Type? Theor. Appl. Genet., 2003, vol. 106, pp. 317–325.

    PubMed  CAS  Google Scholar 

  25. Bormann, C.A., Rickert, A.M., Castillo Ruiz, R.A., Paal, J., Lubeck, J., Strahwald, J., Buhr, K., and Gebhardt, C., Tagging Quantitative Trait Loci for Maturity-Corrected Late Blight Resistance in Tetraploid Potato with PCR-Based Candidate Gene Markers, Mol. Plant-Microbe Interact., 2004, vol. 17, pp. 1126–1138.

    PubMed  CAS  Google Scholar 

  26. Bradshaw, J.E., Pande, B., Bryan, G.J., Hackett, C.A., McLean, K., Stewart, H.E., and Waugh, R., Interval Mapping of Quantitative Trait Loci for Resistance to Late Blight [Phytophthora infestans (Mont.) de Bary], Height and Maturity in a Tetraploid Population of Potato (Solanum tuberosum subsp. tuberosum), Genetics, 2004, vol. 168, pp. 983–995.

    Article  PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Original Russian Text © M.P. Beketova, P.E. Drobyazina, E.E. Khavkin, 2006, published in Fiziologiya Rastenii, 2006, Vol. 53, No. 3, pp. 431–436.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Beketova, M.P., Drobyazina, P.E. & Khavkin, E.E. The R1 gene for late blight resistance in early and late maturing potato cultivars. Russ J Plant Physiol 53, 384–389 (2006). https://doi.org/10.1134/S1021443706030149

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S1021443706030149

Key words

Navigation