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Crystal structure, spectroscopy, and theoretical calculations of two bis(benzimidazolyl)butane derivatives

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Abstract

Two ligands for coordination compounds incorporating benzimidazole moieties, namely 1,1′-butane-1,4-diylbis(5,6-dimethyl-1H-benzimidazole) and 1,1′-butane-1,4-diylbis(1H-benzimidazole), are synthesized and then characterized both experimentally and theoretically. Their structures are studied by single crystal X-ray diffraction, UV-Vis spectroscopy, and FT-IR spectroscopy. The optimized geometries, vibrational frequencies, vertical excitation energies of the two ligands are calculated using the (TD)DFT/B3LYP/TZVP method. The calculated results reproduce the experimental data. Additional bonding information about the coordinated N atoms in the two ligands is obtained by FMO and NBO analysis to investigate the substitute-group effect on the coordination ability. The results confirm that the ligand with electron-donating methyl groups on the benzimidazole moieties has a stronger coordination ability.

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References

  1. B. F. Hoskins and R. Robson, J. Am. Chem. Soc., 111, 5962 (1989).

    Article  CAS  Google Scholar 

  2. B. F. Hoskins and R. Robson, J. Am. Chem. Soc., 112, 1546 (1990).

    Article  CAS  Google Scholar 

  3. P. Horcajada, C. Serre, D. Grosso, C. Boissiere, S. Perruchas, C. Sanchez, and G. Ferey, Adv. Mater., 21, 1931 (2009).

    Article  CAS  Google Scholar 

  4. W. Cho, H. J. Lee, and M. Oh, J. Am. Chem. Soc., 130, 16943 (2008).

    Article  CAS  Google Scholar 

  5. T. Tsuruoka, S. Furukawa, Y. Takashima, K. Yoshida, S. Isoda, and S. Kitagawa, Angew. Chem. Int. Ed., 48, 4739 (2009).

    Article  CAS  Google Scholar 

  6. N. Kerbellec, L. Catala, C. Daiguebonne, A. Gloter, O. Stephan, J.-C. Bunzli, O. Guillou, and T. Mallah, New J. Chem., 32, 584 (2008).

    Article  CAS  Google Scholar 

  7. S. R. Batten, Coordination Polymers: Design, Analysis and Application, RSC Publishing (2008).

    Google Scholar 

  8. K. M. L. Taylor, A. Jin, and W. Lin, Angew. Chem. Int. Ed., 47, 7722 (2008).

    Article  CAS  Google Scholar 

  9. W. J. Rieter, K. M. Pott, K. M. L. Taylor, and W. Lin, J. Am. Chem. Soc., 130, 11584 (2008).

    Article  CAS  Google Scholar 

  10. K. M. L. Taylor, W. J. Rieter, and W. Lin, J. Am. Chem. Soc., 130, 14358 (2008).

    Article  CAS  Google Scholar 

  11. T. Chalati, P. Horcajada, R. Gref, P. Couvreur, and C. Serre, J. Mater. Chem., 21, 2220 (2011).

    Article  CAS  Google Scholar 

  12. S. Hermes, T. Witte, T. Hikov, D. Zacher, S. Bahnmculler, G. Langstein, K. Huber, and R. A. Fischer, J. Am. Chem. Soc., 129, 5324 (2007).

    Article  CAS  Google Scholar 

  13. A. F. Wells, Three-Dimensional Nets and Polyhedral, Wiley-Interscience, New York (1977).

    Google Scholar 

  14. G.-D. Feng, L. Jiang, Z.-X. Li, Q. Chen, X.-L. Wang, K.-Z. Shao, C.-Y. Sun, L.-J. Li, J.-H. Yu, and Z.-M. Su, Inorg. Chem. Comm., 24, 247 (2012).

    Article  CAS  Google Scholar 

  15. S.-L. Xiao, X. Du, L. Qin, C.-H. He, and G.-H. Cui, J. Inorg. Organomet. Polym., 22, 1384 (2012).

    Article  CAS  Google Scholar 

  16. C.-H. Jiao, J.-C. Geng, C.-H. He, and G.-H. Cui, J. Mol. Struct., 1020, 134 (2012).

    Article  CAS  Google Scholar 

  17. M. Akkurt, S. Karaca, H. Kücükbay, and O. Büyükgüngör, Acta Crystallogr., E63, o1065 (2007).

    Google Scholar 

  18. G. M. Sheldrick, SADABS, University of Göttingen, Germany (1996).

    Google Scholar 

  19. G. M. Sheldrick, SHELXS97 and SHELXL97, University of Göttingen, Germany (1997).

    Google Scholar 

  20. M. J. Frisch, G. W. Trucks, H. B. Schlegel, G. E. Scuseria, M. A. Robb, J. R. Cheeseman, G. Scalmani, V. Barone, B. Mennucci, G. A. Petersson, H. Nakatsuji, M. Caricato, X. Li, H. P. Hratchian, A. F. Izmaylov, J. Bloino, G. Zheng, J. L. Sonnenberg, M. Hada, M. Ehara, K. Toyota, R. Fukuda, J. Hasegawa, M. Ishida, T. Nakajima, Y. Honda, O. Kitao, H. Nakai, T. Vreven, J. A. Montgomery Jr., J. E. Peralta, F. Ogliaro, M. Bearpark, J. J. Heyd, E. Brothers, K. N. Kudin, V. N. Staroverov, R. Kobayashi, J. Normand, K. Raghavachari, A. Rendell, J. C. Burant, S. S. Iyengar, J. Tomasi, M. Cossi, N. Rega, J. M. Millam, M. Klene, J. E. Knox, J. B. Cross, V. Bakken, C. Adamo, J. Jaramillo, R. Gomperts, R. E. Stratmann, O. Yazyev, A. J. Austin, R. Cammi, C. Pomelli, J. W. Ochterski, R. L. Martin, K. Morokuma, V. G. Zakrzewski, G. A. Voth, P. Salvador, J. J. Dannenberg, S. Dapprich, A. D. Daniels, O. Farkas, J. B. Foresman, J. V. Ortiz, J. Cioslowski, and D. J. Fox, Gaussian 09, Revision A.1, Gaussian Inc., Wallingford CT (2009).

    Google Scholar 

  21. A. D. Becke, J. Chem. Phys., 98, 5648 (1993).

    Article  CAS  Google Scholar 

  22. P. A. M. Dirac, Proc. R. Soc. London, Ser. A, 123, 714 (1929).

    Article  CAS  Google Scholar 

  23. S. H. Vosko, L. Wilk, and M. Nusair, Can. J. Phys., 58, 1200 (1980).

    Article  CAS  Google Scholar 

  24. A. D. Becke, Phys. Rev. A, 38, 3098 (1988).

    Article  CAS  Google Scholar 

  25. C. Lee, W. Yang, and R. G. Parr, Phys. Rev. B, 37, 785 (1988).

    Article  CAS  Google Scholar 

  26. O. Treutler and R. J. Ahlrichs, Chem. Phys., 102, 346 (1995).

    CAS  Google Scholar 

  27. G.-Y. Li, Y.-H. Li, H. Zhang, and G.-H. Cui, Commun. Comput. Chem., 1, 88 (2013).

    Google Scholar 

  28. E. D. Glendening, A. E. Reed, J. E. Carpenter, and F. Weinhold, NBO Version 3.1, TCI, University of Wisconsin, Madison (1998).

    Google Scholar 

  29. J. G. Gilbert, A. W. Addison, P. Prabakaran, R. J. Butcher, and G. Bocelli, Inorg. Chem. Commun., 7, 701 (2004).

    Article  CAS  Google Scholar 

  30. G.-Y. Li, J.-C. Geng, C.-H. He, and G.-H. Cui, J. Mol. Struct., 1031, 56 (2013).

    Article  CAS  Google Scholar 

  31. A. P. Scott and L. Radom, J. Phys. Chem., 100, 16502 (1996).

    Article  CAS  Google Scholar 

  32. P. J. Linstrom and W. G. Mallard (eds.), NIST Chemistry WebBook, NIST Standard Reference Database Number 69, National Institute of Standards and Technology, Gaithersburg MD, 20899; http://webbook.nist.gov (retrieved February 12, 2012).

  33. K. J. Cahill and R. P. Johnson, J. Org. Chem., 78, 1864 (2013).

    Article  CAS  Google Scholar 

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Correspondence to J. -S. Hu.

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Original Russian Text © 2015 A. G.-Y. Li, J.-S. Hu, Y.-F. Liu, G.-H. Cui.

The text was submitted by the authors in English. Zhurnal Strukturnoi Khimii, Vol. 56, No. 1, pp. 49–58, January–February, 2015.

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Li, G.Y., Hu, J.S., Liu, Y.F. et al. Crystal structure, spectroscopy, and theoretical calculations of two bis(benzimidazolyl)butane derivatives. J Struct Chem 56, 42–51 (2015). https://doi.org/10.1134/S0022476615010072

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