Abstract
It has been found using a combination of atomic force microscopy with infrared spectroscopy, gel chromatography, and electrophoresis that inulinase from Kluyveromyces marxianus Y-303 has oligomeric structure, which includes two subunits differing in size, molecular mass, and catalytic activity. It has been shown that the division of the inulinase dimer into monomers leads to an increase in the number of irregular regions by 6% for subunit 1 (54.8 kDa) and by 10% for subunit 2 (8.4 kDa) compared with the native enzyme.
Similar content being viewed by others
References
X. L. Yuan, C. Goosen, H. Kools, et al., Microbiology 152(10), 3061 (2006).
M. Mazutti, G. Ceni, M. Di Luccio, and H. Treichel, Bioprocess. Biosyst. Eng. 30(5), 297 (2007).
R. A. Pessoni, M. R. Braga, and R. C. Figueiredo-Ribeiro, Mycologia 99(4), 493 (2007).
R. S. Singh, B. S. Sooch, and M. Puri, Bioresour. Technol. 98(13), 2518 (2007).
X. L. Yuan, J. A. Roubos, C. A. van der Hondel, and A. F. Ram, Mol. Genet. Genomics 27(1), 11 (2008).
R. M. Gern, S. A. Furlan, J. L. Ninow, and R. Jonas, Appl. Microbiol. Biotechnol. 55(5), 632 (2001).
O. S. Korneeva, Carbohydrases: Preparative Isolation and Mechanism of Action on Oligo- and Polysaccharides (Izd. Voronezh Univ., Voronezh, 2001) [in Russian].
V. A. Abelyan and L. S. Manukyan, Biokhimiya 61(6), 1028 (1996).
A. M. Balayan, L. A. Pivazyan, R. N. Khachaturyan, et al., Biokhimiya 61(5), 895 (1996).
T. A. Kovaleva, O. M. Kozhokina, and O. D. Trofimova, Radiats. Biol. Radioekol. 40(1), 23 (2000).
N. A. Zherebtsov, N. I. Abramova, and S. A. Shalamova, Biotekhnologiya no. 3, 13 (2002).
S. Park, I. Hen, H. Kim et al., Biokhimiya 68(6), 805 (2003).
R. S. Singh, D. Rajesh, and P. Munish, J. Microbiol. Biotechnol. 17(5), 733 (2007).
V. N. Golubev and V. P. Kulev, Pishch. Promyshl. no. 9, 52 (1991).
J. P. Park, D. H. Kim, D. S. Kim, and J. W. Yun, Biotechnol. Lett. 20(4), 385 (1998).
R. S. Singh, R. Dhaliwal, and M. Puri, J. Microbiol. Biotechnol. 34, 649 (2007).
F. Alberto, C. Bignon, G. Sulzenbacher, et al., J. Biol. Chem. 279, 18903 (2004).
F. Alberto, E. Jordi, B. Henrissat, and M. Czjzek, Biochem. J. 395, 457 (2006).
M. Arand, A. M. Golubev, J. R. B. Neto, et al., Biochem. J. 362, 131 (2002).
R. A. P. Nagem, A. L. Rojas, A. M. Golubev, et al., J. Mol. Biol. 344, 471 (2004).
M. Verhaest, W. V. Ende, K. L. Roy, et al., Plant J. 41, 400 (2005).
D. Lohr, R. Bash, H. Wang, et al., NIH Public Access Author Manuscript. Methods. 41(3), 333 (2007).
A. E. Pelling, Y. Li, W. Shi, and J. K. Gimzewski, Proc. Natl. Acad. Sci. USA 102(18), 6484 (2005).
T. Sato, M. Esaki, J. M. Fernandez, and T. Endo, Proc. Natl. Acad. Sci. USA 102(50), 17999 (2005).
A. Pessoa and M. Vitolo, Braz. J. Chem. Eng. 16(3), 324 (1999).
P. Selvakumar and A. Pandey, Bioresource Technology 69, 123 (1999).
S. J. Kalil, R. Suzan, F. Maugeri, and M. I. Rodrigues, Appl. Biochem. Biotechnol. 94(3), 257 (2001).
G. G. Fonseca, E. Heinzle, C. Wittmann, and A. K. Gombert, Appl. Microbiol. Biotechnol. 79, 339 (2008).
R. J. Rouwenhorst, L. E. Visser, A. A. van der Baan, et al., Appl. Environ. Microboil. 54, 1131 (1988).
T. A. Kovaleva, M. G. Kholyavka, and A. S. Takha, Biotekhnologiya no. 3, 80 (2007).
A. I. Ermakov, V. V. Arasimovich, and N. P. Yarosh, Methods of Biochemical Study of Plants (Agropromizdat, Leningrad, 1987) [in Russian].
W. Wei, X. Yu, Y. Dai, et al., Wei Sheng Wu Xue Bao [Article in Chinese] 37(7), 443 (1997).
R. T. Kushi, R. Monti, and J. Contiero, J. Industrial Microbiology & Biotechnology 25, 63 (2000).
A. Pessoa and M. Vitolo, Biotechnology Techniques 11(6), 421 (1997).
R. J. Rouwenhorst, M. Hensing, J. Verbakel, et al., Appl. Envirion. Microbiol. 56(11), 3337 (1990).
T. A. Kovaleva, Doctoral Dissertation in Biology (Voronezh Univ., Voronezh, 1998).
K. Kim, S. Rhee, and S. Kim, J. Biochem. 138, 27 (2005).
S. Moriyama, H. Tanaka, M. Uwataki, et al., J. Biosci. Bioeng. 96, 324 (2003).
A. Kochhar, A. K. Gupta, and N. Kaur, J. Sci. Food Agric. 79, 549 (1999).
M. Ettalibi and J. C. Baratti, Enzyme Microb. Technol. 28, 596 (2001).
P. K. Gill, R. K. Manhas, and P. Singh, Bioresour. Technol. 97(7), 894 (2006).
A. Kochhar, N. Kaur, and A. K. Gupta, J. Sci. Ind. Res. 56, 721 (1997).
P. K. Gill, R. K. Manhas, J. Singh, and P. Singh, Appl. Biochem. Biotechnol. 117(1), 19 (2004).
M. Ettalibi and J. C. Baratti, Appl. Microbiol. Biotechnol. 26, 13 (1987).
K. Haraguchi, M. Kismoto, K. Seki, et al., Agric. Biol. Chem. 52, 291 (1988).
D. Letca, Doctoral Dissertation (Bucharest, 2004).
M. Kawamura, S. Takahashi, and T. Uchiyama, Agric. Biol. Chem. 52, 3209 (1988).
Author information
Authors and Affiliations
Corresponding author
Additional information
Original Russian Text © V.G. Artyukhov, T.A. Kovaleva, M.G. Kholyavka, L.A. Bityutskaya, M.V. Grechkina, T.B. Obraztsova, 2009, published in Biofizika, 2009, Vol. 54, No. 6, pp. 1005–1011.
Rights and permissions
About this article
Cite this article
Artyukhov, V.G., Kovaleva, T.A., Kholyavka, M.G. et al. Study of the oligomeric structure and some physicochemical properties of inulinase from Kluyveromyces marxianus Y-303. BIOPHYSICS 54, 675–680 (2009). https://doi.org/10.1134/S0006350909060025
Received:
Published:
Issue Date:
DOI: https://doi.org/10.1134/S0006350909060025