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Screening, characterization and utilization of D-amino acid aminotransferase to obtain D-phenylalanine

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Abstract

D-phenylalanine (D-Phe) is an important side-chain building block for semi-synthetic penicillins and cephalosporins. To synthesize D-Phe, D-amino acid aminotransferases (Dat) from Bacillus subtilis WB600, Bacillus licheniformis ATCC 14580, and Bacillus amyloliquefaciens were firstly compared. The theoretical 3 dimensional models of Dat were constructed, which showed appropriate configuration for synthesis of D-Phe in virtual screening. The comparison 3 different Dat on D-Phe formation was tested. All the heterogenous Dat showed high thermostability and pH stability, while Dat from B. subtilis demonstrated a better potential for Phe production than those from B. licheniformis and B. amyloliquefaciens. Then the dat from B. subtilis was expressed in an L-Phe producing chassis of Escherichia coli W14 (pR15ABK) to obtain D-Phe and different factors affecting D-Phe accumulation were tested. The engineered strain E. coli BCEA (pR15ABKApRdatBS) accumulated 1.72 g/L D-Phe in a 15-L jar fermenter which is the highest fermentation concentration that had been reported.

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References

  1. Vedha-Peters, K., Gunawardana, M., Rozzell, J.D., and Novick, S.J., J. Am. Chem. Soc., 2006, vol. 128, no. 33, pp. 10923–10929.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  2. Tripathi, C.K.M., Bihari, V., and Tyagi, R.D., Process Biochem., 2000, vol. 35, no. 10, pp. 1247–1251.

    Article  CAS  Google Scholar 

  3. Wakayama, M., Yoshimune, K., Hirose, Y., and Moriguchi, M., J. Mol. Catal. B: Enzym., 2003, vol. 23, no. 2, pp. 71–85.

    Article  CAS  Google Scholar 

  4. Bae, H.S., Hong, S.P., Lee, S.G., Kwak, M.S., Esaki, N., and Sung, M.H., J. Mol. Catal. B: Enzym., 2002, vol. 17, no. 6, pp. 223–233.

    Article  CAS  Google Scholar 

  5. Bongaerts, J., Kramer, M., Muller, U., Raeven, L., and Wubbolts, M., Metab. Eng., 2001, vol. 3, no. 4, pp. 289–300.

    Article  CAS  PubMed  Google Scholar 

  6. Liu, S.P., Xiao, M.R., Zhang, L., Xu, J., Ding, Z.Y., Gu, Z.H., and Shi, G.Y., Process Biochem., 2013, vol. 48, no. 3, pp. 413–419.

    Article  CAS  Google Scholar 

  7. Liu, S.P., Xiao, M.R., Liu, R.X., Zhang, L., Ding, Z.Y., Gu, Z.H., and Shi, G.Y., Process Biochem., 2014, vol. 49, no. 5, pp. 751–757.

    Article  CAS  Google Scholar 

  8. Taylor, P.P., Grinter, N.J., McCarthy, S.L., Pantaleone, D.P., Ton, J.L., Yoshida, R.K., and Fotheringhan, I.G., ACS Symp. Series, 2001, pp. 65–75.

    Google Scholar 

  9. Tanizawa, K., Masu, Y., Asano, S., Tanaka, H., and Soda, K., J. Biol. Chem., 1989, vol. 264, no. 5, pp. 2445–2449.

    CAS  PubMed  Google Scholar 

  10. Taylor, P.P. and Fotheringham, I.G., Biochim. Biophys. Acta, 1997, vol. 1350, no. 1, pp. 38–40.

    Article  CAS  PubMed  Google Scholar 

  11. Datsenko, K.A. and Wanner, B.L., Proc. Natl. Acad. Sci. USA, 2000, vol. 97, no. 12, pp. 6640–6645.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  12. Benkert, P., Biasini, M., and Schwede, T., Bioinformatics, 2011, vol. 27, no. 3, pp. 343–350.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  13. Guex, N. and Peitsch, M.C., Electrophoresis, 1997, vol. 18, no. 15, pp. 2714–2723.

    Article  CAS  PubMed  Google Scholar 

  14. Kobayashi, J., Shimizu, Y., Mutaguchi, Y., Doi, K., and Ohshima, K., J. Mol. Catalysis B, 2013, vol. 94, pp. 15–22.

    Article  CAS  Google Scholar 

  15. Green, M.R. and Sambrook, J., Molecular Cloning: A Laboratory Manual, New York: Cold Spring Harbor, 2012.

    Google Scholar 

  16. Laemmli, U.K., Nature, 1970, vol. 227, no. 5259, pp. 680–685.

    Article  CAS  PubMed  Google Scholar 

  17. Bradford, M.M., Anal Biochem., 1976, vol. 72, no. 1, pp. 248–254.

    Article  CAS  PubMed  Google Scholar 

  18. Gerigk, M.R., Maass, D., Kreutzer, A., Sprenger, G., Bongaerts, J., Wubbolts, M., and Takor, R., Bioprocess Biosyst. Eng., 2002, vol. 25, no. 1, pp. 43–52.

    Article  CAS  PubMed  Google Scholar 

  19. Madsen, S.M., Beck, H.C., Ravn, P., Vrang, A., Hansen, A.M., and Israelsen, H., Appl. Environ. Microbiol., 2002, vol. 68, no. 8, pp. 4007–4014.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  20. Liu, S.P., Ding, Z.Y., Zhang, L., Gu, Z.H., Wang, X.L., Sun, X.J., and Shi, G.Y., Biomass Bioenerg., 2012, vol. 37, pp. 237–242.

    Article  CAS  Google Scholar 

  21. Sugio, S., Petsko, G.A., Manning, J.M., Soda, K., and Ringe, D., Biochemistry, 1995, vol. 34, no. 30, pp. 9661–9669.

    Article  CAS  PubMed  Google Scholar 

  22. Müller, U., Van Assema, F., Gunsior, M., Orf, S., Kremer, S., Schipper, D., and Wubbolts, M., Metab. Eng., 2006, vol. 8, no. 3, pp. 196–208.

    Article  PubMed  Google Scholar 

  23. Wild, J. and Obrepalska, B., Mol. Gen. Genet., 1982, vol. 186, no. 3, pp. 405–410.

    Article  CAS  PubMed  Google Scholar 

  24. Gelfand, D.H. and Steinberge, R.A., J. Bacteriol., 1977, vol. 130, no. 1, pp. 429–440.

    PubMed Central  CAS  PubMed  Google Scholar 

  25. Baek, J.O., Seo, J.W., Kwon, O., Seong, S.I., Kim, I.H., and Kim, C.H., J. Biotechnol., 2008, vol. 24, no. 12, pp. 2129.

    Google Scholar 

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Liu, R.X., Liu, S.P., Cheng, S. et al. Screening, characterization and utilization of D-amino acid aminotransferase to obtain D-phenylalanine. Appl Biochem Microbiol 51, 695–703 (2015). https://doi.org/10.1134/S0003683815060095

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