Skip to main content

Advertisement

Log in

Pressure effect on the structure of the Tet repressor protein TetR(B)

  • Paper
  • Published:
Photochemical & Photobiological Sciences Aims and scope Submit manuscript

Abstract

The fluorescence of two single tryptophan (trp) mutants of the TetR(B)dimer protein was monitored for hydrostatic pressures 0.1 MPa < p < 300 MPa. In mutant W170, in which trp interacts with segments of both subunits, the fitted fluorescence lifetimes vary both with pressure and observation wavelength. In contrast, the lifetimes are fairly independent of both parameters in the case of W171, in which trp is completely solvent exposed. This difference in fluorescence behaviour is in agreement with the fact that only trp 170 experiences a strong alteration of its direct environment upon a movement of α-helix 9 induced by increasing static pressure. The conformational changes induced by pressure in this protein region are only partly reversible. After pressure release, the originally more solvent exposed trp 171 ends up, at least in part, in a more solvent shielded environment and the originally protein embedded trp 170 ends up in a more solvent exposed conformation. These observations provide evidence for heterogeneity in chromophore-protein arrangement under normal, biologically relevant conditions. Furthermore, they indicate that no complete dissociation into monomers occurs at pressures below 300 MPa.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. W. Hillen and C. Berens, Annu. Rev. Microbiol., 1994, 48, 345–369.

    Article  CAS  Google Scholar 

  2. Tetracyclines in Biology, Chemistry and Medicine, ed. R. A. Greenwald, W. Hillen and M. Nelson, Birkhäuser, Basel, Switzerland, 2001.

    Google Scholar 

  3. T. Lederer, M. Takahashi and W. Hillen, Anal. Biochem., 1995, 232, 190–196.

    Article  CAS  Google Scholar 

  4. W. Hinrichs, C. Kisker, M. Düvel, A. Müller, K. Tovar, W. Hillen and W. Saenger, Science, 1994, 264, 418–420.

    Article  CAS  Google Scholar 

  5. C. Kisker, W. Hinrichs, K. Tovar, W. Hillen and W. Saenger, J. Mol. Biol., 1995, 247, 260–280.

    Article  CAS  Google Scholar 

  6. P. Orth, F. Cordes, D. Schnappinger, W. Hillen, W. Saenger and W. Hinrichs, J. Mol. Biol., 1998, 279, 439–447.

    Article  CAS  Google Scholar 

  7. P. Orth, W. Saenger and W. Hinrichs, Biochemistry, 1999, 38, 191–198.

    Article  CAS  Google Scholar 

  8. P. Orth, D. Schnappinger, W. Hillen, W. Saenger and W. Hinrichs, Nat. Struct. Biol., 2000, 7, 215–219.

    Article  CAS  Google Scholar 

  9. M. Kintrup, PhD thesis, Universität Erlangen-Nürnberg, Germany, 1998.

    Google Scholar 

  10. M. Kintrup, P. Schubert, M. Kunz, M. Chabbert, P. Alberti, E. Bombarda, S. Schneider and W. Hillen, Eur. J. Biochem., 2000, 267, 821–829.

    Article  CAS  Google Scholar 

  11. M. Kunz, PhD thesis, Universität Erlangen-Nürnberg, Germany, 2000.

    Google Scholar 

  12. M. Kunz, M. Kintrup, W. Hillen and S. Schneider, Photochem. Photobiol., 2000, 72, 35–48.

    Article  CAS  Google Scholar 

  13. K. Ruan, S. Tian, R. Lange and C. Balny, Biochem. Biophys. Res. Commun., 2000, 269, 681–686.

    Article  CAS  Google Scholar 

  14. F. Meersman, L. Smeller and K. Heremans, Biophys. J., 2002, 82, 2635–2644.

    Article  CAS  Google Scholar 

  15. C. Balny, P. Masson and K. Heremans, Biochem. Biophys. Acta, 2002, 1595, 3–10.

    CAS  Google Scholar 

  16. P. Gaspar, A. F. Terezan, A. S. Pinheiro, D. Foguel, M. A. Retello and J. L. Silva, J. Biol. Chem., 2001, 276, 7415–7421.

    Article  CAS  Google Scholar 

  17. J. L. Silva, D. Foguel and C. A. Royer, Trends Biochem. Sci., 2001, 26(10), 612–618.

    Article  Google Scholar 

  18. P. Cioni and G. B. Strambini, J. Mol. Biol., 1996, 263, 789–799.

    Article  CAS  Google Scholar 

  19. G. Desai, G. Panick, M. Zein, R. Winter and C. A. Royer, J. Mol. Biol., 1999, 288, 461–475.

    Article  CAS  Google Scholar 

  20. P. Bevington and D. Robinson, Data reduction and error analysis for the physical sciences, McGraw Hill Inc., Boston, 1992.

    Google Scholar 

  21. http://www.ULIB.ORG/WEBROOT/Books/Numerical_Recipes/bookcpdf.html, Numerical recipes in C, Cambridge University Press, 1992.

  22. J. Lakowicz, Principles of Fluorescence Spectroscopy, Plenum Press, New York, 1999.

    Book  Google Scholar 

  23. J. Lakowicz, Photochem. Photobiol., 2000, 72(4), 421–437.

    Article  CAS  Google Scholar 

  24. J. W. Petrich, M. C. Chang, D. B. McDonald and G. R. Fleming, J. Am. Chem. Soc., 1983, 105, 3824–3832.

    Article  CAS  Google Scholar 

  25. R. Engh, L. Chen and G. Fleming, Chem. Phys. Lett., 1986, 126, 365–372.

    Article  CAS  Google Scholar 

  26. B. Vergani, M. Kintrup, W. Hillen, H. Lami, E. Piémont, E. Bombarda, P. Alberti, S. M. Doglia and M. Chabbert, Biochemistry, 2000, 39, 2759–2768.

    Article  CAS  Google Scholar 

  27. D. Toptygin, R. S. Savtchenko, N. D. Meadow and L. Brand, J. Phys. Chem. B, 2001, 105, 2043–2055.

    Article  CAS  Google Scholar 

  28. D. Toptygin and L. Brand, Chem. Phys. Lett., 2000, 322, 496–502.

    Article  CAS  Google Scholar 

  29. A. G. Szabo and D. M. Rayner, J. Am. Chem. Soc., 1980, 102, 554–563.

    Article  CAS  Google Scholar 

  30. Th. Marian, DPhil Thesis, Universität Erlangen-Nürnberg, Germany.

  31. J. Janin, S. Wodak, M. Levitt and B. Maigret, J. Mol. Biol., 1978, 125, 357–368.

    Article  CAS  Google Scholar 

  32. K. Ruan, B. Lange, Y. Zhou and C. Balny, Biochem. Biophys. Res. Commun., 1998, 249, 844–848.

    Article  CAS  Google Scholar 

  33. G. Weber, Protein Interactions, Chapman and Hall, New York, 1992.

    Google Scholar 

  34. W. Liptay, Z. Naturforsch., A, 1965, 20, 272–289.

    Article  Google Scholar 

  35. E. Lippert, Z. Elektrochem., 1957, 61, 962–975.

    CAS  Google Scholar 

  36. J. T. Vivian and P. R. Callis, Biophys. J., 2001, 80, 2093–2109.

    Article  CAS  Google Scholar 

  37. J. N. Onuchic, H. Nymeyer, A. E. Garcia, J. Chahine and N. D. Socci, Adv. Protein Chem., 2000, 53, 87–152.

    Article  CAS  Google Scholar 

  38. P. Schubert, D. Schnappinger, K. Pfleiderer and W. Hillen, Biochemistry, 2001, 40, 3257–3263.

    Article  CAS  Google Scholar 

  39. X. Shen and J. R. Knutson, J. Phys. Chem. B, 2001, 105, 6260–6265.

    Article  CAS  Google Scholar 

  40. K. Inoue, H. Yamada, K. Akasaka, C. Hermann, W. Kremer, T. Maurer, R. Döker and H. R. Kalbitzer, Nat. Struct. Biol., 2000, 7, 547–550.

    Article  CAS  Google Scholar 

  41. K. Ruan, R. Lange, F. Meersmann, K. Heremans and C. Balny, Eur. J. Biochem., 1999, 265, 79–85.

    Article  CAS  Google Scholar 

  42. R. Lange and C. Balny, Biochem. Biophys. Acta, 2002, 1595, 80–93.

    CAS  Google Scholar 

  43. K. Ruan and C. Balny, Biochem. Biophys. Acta, 2002, 1595, 94–102.

    CAS  Google Scholar 

  44. H. Frauenfelder and B. H. McMahon, Proc. Natl. Acad. Sci. USA, 1998, 95, 4795–4797.

    Article  CAS  Google Scholar 

  45. H. Frauenfelder, B. H. McMahon, R. H. Austin, K. Chu and J. T. Groves, Proc. Natl. Acad. Sci. USA, 1998, 98, 2370–2374.

    Article  Google Scholar 

  46. K. Döhring, T. Surrey, P. Nollert and F. Jähnig, Eur. J. Biochem., 1999, 266, 477–483.

    Article  Google Scholar 

Download references

Acknowledgements

We wish to thank Prof. Dr. J. Friedrich (Weihenstephan), Prof. Dr. W. Hinrichs (Greifswald) and Dr. H. Lanig (Erlangen) for helpful discussions. Financial support by Deutsche Forschungsgemeinschaft (SFB 473) and Fonds der Chemischen Industrie is also gratefully acknowledged.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Siegfried Schneider.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Marian, DT., Leypold, C., Kunz, M. et al. Pressure effect on the structure of the Tet repressor protein TetR(B). Photochem Photobiol Sci 1, 841–851 (2002). https://doi.org/10.1039/b202358j

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1039/b202358j

Navigation