A synthetic DNA enzyme catalyses the formation of a native phosphodiester bond between two RNA fragments, but the molecular details of the mechanism remained elusive. Research using computational and biochemical approaches now suggests that the DNA enzyme recruits two magnesium ions to assist in the catalysis of RNA ligation.
References
Joyce, G. F. Angew. Chem. Int. Ed. 46, 6420–6436 (2016).
Breaker, R. R. & Joyce, G. F. Chem. Biol. 1, 223–229 (1994).
Purtha, W. E., Coppins, R. L., Smalley, M. K. & Silverman, S. K. J. Am. Chem. Soc. 127, 13124–13125 (2005).
Ponce-Salvatierra, A., Wawrzyniak-Turek, K., Steuerwald, U., Höbartner, C. & Pena, V. Nature 529, 231–234 (2016).
Aranda, J.,Terrazas, M., Gomez, H., Villegas, N. & Orozco M. Nat. Catal. https://doi.org/10.1038/s41929-019-0290-y (2019).
Raper, A. T., Reed, A. J. & Suo, Z. Chem. Rev. 118, 6000–6025 (2018).
Mattioli, E. J., Bottoni, A. & Calvaresi, M. J. Chem. Inf. Model. 59, 1547–1553 (2019).
Wachowius, F. & Höbartner, C. J. Am. Chem. Soc. 133, 14888–14891 (2011).
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Höbartner, C. How DNA catalyses RNA ligation. Nat Catal 2, 483–484 (2019). https://doi.org/10.1038/s41929-019-0295-6
Published:
Issue Date:
DOI: https://doi.org/10.1038/s41929-019-0295-6
- Springer Nature Limited
This article is cited by
-
Zn2+-dependent DNAzymes that cleave all combinations of ribonucleotides
Communications Biology (2021)