sc-SPORT offers a way to probe RNA structure at the single-cell level. It reveals cell-to-cell heterogeneity in RNA folding.
References
Su, Z. et al. Proc. Natl Acad. Sci. USA 115, 12170–12175 (2018).
Sun, L. et al. Nat. Struct. Mol. Biol. 26, 322–330 (2019).
Christy, T. W. et al. Biochemistry 60, 1971–1982 (2021).
Jolley, E. A., Yakhnin, H., Tack, D. C., Babitzke, P. & Bevilacqua, P. C. RNA 29, 1365–1378 (2023).
Zubradt, M. et al. Nature 14, 75–82 (2017).
Spasic, A., Assmann, S. M., Bevilacqua, P. C. & Mathews, D. H. Nucleic Acids Res. 46, 314–323 (2018).
Wang, J. et al. Nat. Methods https://doi.org/10.1038/s41592-023-02128-y (2024).
Smola, M. J. & Weeks, K. M. Nat. Protoc. 13, 1181–1195 (2018).
Yamagami, R., Sieg, J. P., Assmann, S. M. & Bevilacqua, P. C. Proc. Natl Acad. Sci. USA 119, e2201237119 (2022).
Flynn, R. A. et al. Nat. Protoc. 11, 273–290 (2016).
Acknowledgements
This work was supported by funds from the National Institute of Health grant R35- GM127064 (P.C.B.).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Competing interests
The authors declare no competing interests.
Rights and permissions
About this article
Cite this article
Jolley, E.A., Bevilacqua, P.C. Single-cell probing of RNA structure. Nat Methods 21, 377–378 (2024). https://doi.org/10.1038/s41592-024-02178-w
Published:
Issue Date:
DOI: https://doi.org/10.1038/s41592-024-02178-w
- Springer Nature America, Inc.