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3D genomics

RNA Pol II enters the ring of cohesin-mediated loop extrusion

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The three-dimensional organization of mammalian chromosomes can regulate transcription. Whether transcription itself influences genome structure has remained a source of debate. Using sensitive genome-wide readouts, two recent studies describe the involvement of transcription on genome architecture by different mechanisms.

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Fig. 1: Involvement of Pol II in loop formation by two different mechanisms.

References

  1. Dixon, J. R. et al. Nature 485, 376–380 (2012).

    Article  CAS  PubMed  Google Scholar 

  2. Fudenberg, G. et al. Cell Rep. 15, 2038–2049 (2016).

    Article  CAS  PubMed  Google Scholar 

  3. Calderon, L. et al. Elife 11, e76539 (2022).

    Article  CAS  PubMed  Google Scholar 

  4. Kane, L. et al. Nat. Struct. Mol. Biol. 29, 891–897 (2022).

    Article  CAS  PubMed  Google Scholar 

  5. da Costa-Nunes, J. A. & Noordermeer, D. Curr. Opin. Struct. Biol. 81, 102622 (2023).

    Article  PubMed  Google Scholar 

  6. Mitchell, J. A. & Fraser, P. Genes Dev. 22, 20–25 (2008).

    Article  CAS  PubMed  Google Scholar 

  7. Hsieh, T. S. et al. Mol. Cell. 78, 539–553 (2020).

    Article  CAS  PubMed  Google Scholar 

  8. Jiang, Y. et al. Genome Biol. 21, 158 (2020).

    Article  CAS  PubMed  Google Scholar 

  9. Zhang, S. et al. Sci. Adv. 7, eabg8205 (2021).

    Article  CAS  PubMed  Google Scholar 

  10. Zhang, S. et al. Nat. Genet. 55, 832–840 (2023).

    Article  CAS  PubMed  Google Scholar 

  11. Barshad, G. et al. Nat. Genet. https://doi.org/10.1038/s41588-023-01442-7 (2023).

    Article  PubMed  Google Scholar 

  12. Alexander, J. M. et al. Elife 8, e41769 (2019).

    Article  PubMed  Google Scholar 

  13. Core, L. J. et al. Science 322, 1845–1848 (2008).

    Article  CAS  PubMed  Google Scholar 

  14. Zhu, Y. et al. Genes Dev. 35, 65–81 (2021).

    Article  CAS  PubMed  Google Scholar 

  15. Chopra, V. S. et al. Genes Dev. 23, 1505–1509 (2009).

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Daan Noordermeer.

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Noordermeer, D. RNA Pol II enters the ring of cohesin-mediated loop extrusion. Nat Genet 55, 1256–1258 (2023). https://doi.org/10.1038/s41588-023-01463-2

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