Genetics has played a key role in understanding the relationship between the DNA sequence encoding a protein and the protein’s three-dimensional structure. Two new studies present similar analytical approaches to predict three-dimensional structure on the basis of genetic interaction data.
References
Fowler, D. M. & Fields, S. Nat. Methods 11, 801–807 (2014).
Gasperini, M., Starita, L. & Shendure, J. Nat. Protoc. 11, 1782–1787 (2016).
Schmiedel, J. M. & Lehner, B. Nat. Genet. https://doi.org/10.1038/s41588-019-0431-x (2019).
Rollins, N. J. et al. Nat. Genet. https://doi.org/10.1038/s41588-019-0432-9 (2019).
Altschuh, D., Lesk, A. M., Bloomer, A. C. & Klug, A. J. Mol. Biol. 193, 693–707 (1987).
Miller, C. S. & Eisenberg, D. Bioinformatics 24, 1575–1582 (2008).
Marks, D. S., Hopf, T. A. & Sander, C. Nat. Biotechnol. 30, 1072–1080 (2012).
Ovchinnikov, S. et al. eLife 4, e09248 (2015).
Sahoo, A., Khare, S., Devanarayanan, S., Jain, P. & Varadarajan, R. eLife 4, e09532 (2015).
Baryshnikova, A., Costanzo, M., Myers, C. L., Andrews, B. & Boone, C. Annu. Rev. Genom. Hum. Genet. 14, 111–133 (2013).
Olson, C. A., Wu, N. C. & Sun, R. Curr. Biol. 24, 2643–2651 (2014).
Araya, C. L. et al. Proc. Natl Acad. Sci. USA 109, 16858–16863 (2012).
Diss, G. & Lehner, B. eLife 7, e32472 (2018).
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Chiasson, M., Fowler, D.M. Mutagenesis-based protein structure determination. Nat Genet 51, 1072–1073 (2019). https://doi.org/10.1038/s41588-019-0461-4
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DOI: https://doi.org/10.1038/s41588-019-0461-4
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