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The art of the chemical probe

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Chemical biologists frequently aim to create small-molecule probes that interact with a specific protein in vitro in order to explore the role of the protein in a broader biological context (cells or organisms), but a common understanding of what makes a high-quality probe is lacking. Here I propose a set of principles to guide probe qualification.

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References

  1. Oprea, T.I. et al. Nat. Chem. Biol. 5, 441–447 (2009).

    Article  CAS  Google Scholar 

  2. Edwards, A.M., Bountra, C., Kerr, D.J. & Willson, T.M. Nat. Chem. Biol. 5, 436–440 (2009).

    Article  CAS  Google Scholar 

  3. Weiss, W.A., Taylor, S.S. & Shokat, K.M. Nat. Chem. Biol. 3, 739–744 (2007).

    Article  CAS  Google Scholar 

  4. Kaiser, J. Science 321, 764–766 (2008).

    Article  CAS  Google Scholar 

  5. Tanramluk, D., Schreyer, A., Pitt, W.R. & Blundell, T.L. Chem. Biol. Drug Des. 74, 16–24 (2009).

    Article  CAS  Google Scholar 

  6. Karaman, M.W. et al. Nat. Biotechnol. 26, 127–132 (2008).

    Article  CAS  Google Scholar 

  7. Seidler, J., McGovern, S.L., Doman, T.N. & Shoichet, B.K. J. Med. Chem. 46, 4477–4486 (2003).

    Article  CAS  Google Scholar 

  8. Rix, U. & Superti-Furga, G. Nat. Chem. Biol. 5, 616–624 (2009).

    Article  CAS  Google Scholar 

  9. Nolen, B.J. et al. Nature 460, 1031–1034 (2009).

    Article  CAS  Google Scholar 

  10. Huang, S.-M.A. et al. Nature 461, 614–620 (2009).

    Article  CAS  Google Scholar 

  11. Frye, S.V. & Johnson, G.L. Nat. Chem. Biol. 5, 448–449 (2009).

    Article  CAS  Google Scholar 

  12. Okuzumi, T. et al. Nat. Chem. Biol. 5, 484–493 (2009).

    Article  CAS  Google Scholar 

  13. Cameron, A.J., Escribano, C., Saurin, A.T., Kostelecky, B. & Parker, P.J. Nat. Struct. Mol. Biol. 16, 624–630 (2009).

    Article  CAS  Google Scholar 

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Correspondence to Stephen V Frye.

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Frye, S. The art of the chemical probe. Nat Chem Biol 6, 159–161 (2010). https://doi.org/10.1038/nchembio.296

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