Abstract
Genetic control elements are usually situated in local regions of chromatin that are hypersensitive to structural probes such as DNase I. We have reconstructed the chromatin structure of the hsp70 promoter using an in vitro nucleosome assembly system. Binding of the GAGA transcription factor on existing nucleosomes leads to nucleosome disruption, DNase I hypersensitivity at the TATA box and heat-shock elements, and rearrangement of adjacent nucleosomes. ATP hydrolysis facilitates this process, suggesting that an energy-dependent pathway is involved in chromatin remodelling.
Similar content being viewed by others
References
Felsenfeld, G. Nature 335, 219–224 (1992).
Grunstein, M. Rev. Cell. Biol. 6, 643–678 (1990).
Kornberg, R. D. & Lorch, Y. A. Rev. Cell. Biol. 8, 563–587 (1992).
Wu, C. Nature 286, 854–860 (1980).
Gross, D. S. & Garrard, W. T. A. Rev. Biochem. 57, 159–197 (1988).
Workman, J. L. & Buchman, A. R. Trends biochem. Sci. 18, 90–95 (1993).
Hayes, J. J. & Wolffe, A. P. Bioessays 14, 597–603 (1992).
Becker, P. B. & Wu, C. Molec. cell. Biol. 12, 2241–2249 (1992).
Lis, J. T. & Wu, C. Cell 74, 1–4 (1993).
Soeller, W. & Kornberg, T. Molec. cell. Biol. 13, 7961–7970 (1993).
Biggin, M. & Tjian, R. Cell 53, 699–711 (1988).
Dynlacht, B. D., Hoey, T. & Tjian, R. T. Cell 66, 563–576 (1991).
Rougvie, A. E. & Lis, J. T. Cell 54, 795–804 (1988).
Rasmussen, E. & Lis, J. T. Proc. natn. Acad. Sci. U.S.A. 90, 7923–7927 (1993).
Gilmour, D. S., Thomas, G. H. & Elgin, S. C. R. Science 245, 1487–1490 (1989).
Wu, C. Nature 317, 84–87 (1985).
Purnell, B. A. & Gilmour, D. S. Molec. cell. Biol. 13, 2593–2603 (1993).
Parker, C. S. & Topol, J. Cell 36, 357–369 (1984).
van Holde, K. E. Chromatin 16–30 (Springer, New York, 1989).
Wu, C. Nature 309, 229–234 (1984).
Elgin, S. C. R. & Hood, L. E. J. biol. Chem. 12, 4984–4991 (1973).
Blackman, R. K. & Meselson, M. J. molec. Biol. 188, 499–515 (1986).
Ashburner, M. in Developmental Studies on Giant Chromosomes (Springer, Berlin, 1972).
Burtis, K. C. et al. Cell 61, 85–89 (1990).
Lue, Q., Wallrath, L. L., Granok, H. & Eigin, S. C. R. Molec. cell. Biol. 13, 2802–2814 (1993).
Kerrigan, L. A., Croston, G. E., Lira, L. & Kadonaga, J. T. J. biol. Chem. 266, 574–582 (1991).
Harrison, S. D. & Travers, A. A. EMBO J. 9, 207–216 (1990).
Read, D. & Manley, J. L. EMBO J. 11, 1035–1044 (1992).
Brown, J. L. & Wu, C. Development 117, 45–58 (1993).
DiBello, P. R. et al. Genetics 129, 385–397 (1991).
Xue, F. & Cooley, L. Cell 72, 681–693 (1993).
Peterson, C. L. & Herskowitz I. Cell 68, 573–583 (1992).
Winston, F. & Carlson, M. Trends Genet. 8, 387–391 (1992).
Henikoff, S. Trends biochem. Sci 18, 291–292 (1993).
Tamkun, J. W. et al. Cell 68, 561–572 (1992).
Almouzni G. & Wolffe, A. Expl Cell Res. 205, 1–15 (1993).
Schmid, A., Fascher, K. D. & Horz W. Cell 71, 1–20 (1992).
Chasman, D. I. et al. Genes Dev. 4, 503–514 (1990).
Morrow, B. E., Ju, Q. & Warner, J. R. Molec. cell. Biol. 13, 1173–1182 (1993).
Devlin, C., Tice-Baldwin, K., Shore, D. & Arndt K. T. Molec. cell. Biol. 11, 3642–3651 (1991).
Axelrod, J. D., Reagan, M. S. & Majors, J. Genes Dev. 7, 857–869 (1993).
Workman, J. L. & Kingston, R. E. Science 258, 1780–1784 (1992).
Workman, J. L., Taylor, I. A. C. & Kingston R. E. Cell 64, 533–544 (1991).
Kamakaka, R. T., Bulger, M. & Kadonaga, J. T. Genes Dev. 7, 1779–1795 (1993).
Lorch, Y., LaPointe, J. W. & Kornberg, R. D. Genes Dev. 6, 2282–2287 (1992).
Perlman, T. & Wragne, O. EMBO J. 7, 3073–3083 (1988).
Pina, B., Bruggemeier, u. & Beato, M. Cell 60, 719–731 (1990).
Archer, T. K. et al. Molec. cell. Biol. 11, 688–698 (1991).
Mason, P. J. et al. J. molec. Biol. 156, 21–35 (1982).
Croston, G. E., Lira, L. M. & Kadonaga, J. T. Prot. Expr. Purific 2, 162–169 (1991).
Westwood, J. T., Clos, J., & Wu, C. Nature 353, 822–827 (1991).
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Tsukiyama, T., Becker, P. & Wu, C. ATP-dependent nucleosome disruption at a heat-shock promoter mediated by binding of GAGA transcription factor. Nature 367, 525–532 (1994). https://doi.org/10.1038/367525a0
Received:
Accepted:
Issue Date:
DOI: https://doi.org/10.1038/367525a0
- Springer Nature Limited
This article is cited by
-
Energy-driven genome regulation by ATP-dependent chromatin remodellers
Nature Reviews Molecular Cell Biology (2023)
-
A pioneer factor locally opens compacted chromatin to enable targeted ATP-dependent nucleosome remodeling
Nature Structural & Molecular Biology (2023)
-
GAGA factor: a multifunctional pioneering chromatin protein
Cellular and Molecular Life Sciences (2021)
-
A basic motif anchoring ISWI to nucleosome acidic patch regulates nucleosome spacing
Nature Chemical Biology (2020)
-
The transformation of the DNA template in RNA polymerase II transcription: a historical perspective
Nature Structural & Molecular Biology (2019)