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Structure of astacin and implications for activation of astacins and zinc-ligation of collagenases

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Abstract

ASTACIN, a digestive zinc-endopeptidase from the crayfish Astacus astacus L.1,2, is the prototype for the 'astacin family'3–5, which includes mammalian metallo-endopeptidases5 and develop-mentally regulated proteins of man6, fruitfly7, frog8 and sea urchin9,10. Here we report the X-ray crystal structure of astacin, which reveals a deep active-site cleft, with the zinc at its bottom ligated by three histidines, a water molecule and a more remote tyrosine. The third histidine (His 102) forms part of a consensus sequence, shared not only by the members of the astacin family, but also by otherwise sequentially unrelated proteinases, such as vertebrate collagenases11. It may therefore represent the elusive 'third' zinc ligand in these enzymes. The amino terminus of astacin is buried forming an internal salt-bridge with Glu 103, adjacent to His 102. Astacin pro-forms extended at the N terminus, as observed for some 'latent' mammalian astacin homologues, did not exhibit this 'active' conformation, indicating an activation mechanism reminiscent of trypsin-like serine proteinases.

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References

  1. Stöcker, W., Wolz, R. L., Zwilling, R., Strydom, D. J. & Auld, D. S. Biochemistry 27, 5026–5032 (1988).

    Article  Google Scholar 

  2. Titani, K. et al. Biochemistry 26, 222–226 (1987).

    Article  CAS  Google Scholar 

  3. Stöcker, W., Sauer, B. & Zwilling, R. Biol. Chem. Hoppe-Seyler 372, 385–392 (1991).

    Article  Google Scholar 

  4. Barrett, A. J. & Rawlings, D. Biochem. Soc. Trans. 19, 707–715 (1991).

    Article  CAS  Google Scholar 

  5. Dumermuth, E. et al. J. biol. Chem. 266, 21381–21385 (1991).

    CAS  PubMed  Google Scholar 

  6. Wozney, J. M. et al. Science 242, 1528–1534 (1988).

    Article  ADS  CAS  Google Scholar 

  7. Shimell, M. J., Ferguson, E. L., Childs, S. R. & O'Connor, M. B. Cell 67, 469–481 (1991).

    Article  CAS  Google Scholar 

  8. Sato, S. M. & Sargent, T. D. Dev. Biol. 137, 135–141 (1990).

    Article  CAS  Google Scholar 

  9. Reynolds, S. D., Angerer, L. M., Palis, J., Nasir, A. & Angerer, R. C. Development 114, 769–786 (1992).

    CAS  PubMed  Google Scholar 

  10. Lepage, T., Ghiglione, C. & Cache, C. Development 114, 147–164 (1992).

    CAS  PubMed  Google Scholar 

  11. Stöcker, W., Ng, M. & Auld, D. S. Biochemistry 29, 10418–10425 (1990).

    Article  Google Scholar 

  12. Matthews, B. W., Jansonius, J. N., Colman, P. M., Schoenborn, B. P. & Dupourque, D. Nature new Biol. 238, 37–41 (1972).

    Article  CAS  Google Scholar 

  13. Pauptit, R. A. et al. J. molec. Biol. 199, 525–537 (1988).

    Article  CAS  Google Scholar 

  14. Thayer, M. M., Flaherty, K. M. & McKay, D. B. J. biol. Chem. 266, 2864–2871 (1991).

    CAS  PubMed  Google Scholar 

  15. Lipscomb, W. N. et al. Brookhaven Symp. Biol. 21, 24–90 (1968).

    CAS  PubMed  Google Scholar 

  16. Matthews, B. W. Accts chem. Res. 21, 333–340 (1988).

    Article  CAS  Google Scholar 

  17. Vallee, B. L. & Auld, D. S. Biochemistry 29, 5647–5659 (1990).

    Article  CAS  Google Scholar 

  18. Kounnas, M. Z., Wolz, R. L., Gorbea, C. M. & Bond, J. S. J. biol. Chem. 266, 17530–17537 (1991).

    Google Scholar 

  19. Huber, R. & Bode, W. Accts chem. Res. 11, 114–122 (1978).

    Article  CAS  Google Scholar 

  20. Springman, E. B., Angleton, E. L., Birkedal-Hansen, H. & Van Wart, H. E. Proc. natn. Acad. Sci. U.S.A. 87, 364–368 (1990).

    Article  ADS  CAS  Google Scholar 

  21. Goldberg, G. J. et al. J. biol. Chem. 261, 6600–6605 (1986).

    CAS  PubMed  Google Scholar 

  22. Shannon, J. D., Baramova, E. N., Bjarnason, J. B. & Fox, J. W. J. biol. Chem. 264, 11575–11583 (1989).

    CAS  PubMed  Google Scholar 

  23. Whitham, S. E. et al. Biochem. J. 240, 913–916 (1986).

    Article  CAS  Google Scholar 

  24. Titani, K., Hermodson, M. A., Ericsson, L. H., Walsh, K. A. & Neurath, H. Nature new Biol. 238, 35–37 (1972).

    Article  CAS  Google Scholar 

  25. Turk, D. thesis, Technische Universität, München (1992).

  26. Priestle, J. P. J. appl. Crystallogr. 21, 572–576 (1988).

    Article  Google Scholar 

  27. Messerschmidt, A. & Pflugrath, J. W. J. appl. Crystallogr. 20, 306–315 (1987).

    Article  CAS  Google Scholar 

  28. Brünger, A. T. X-PLOR Manual version 2.1 (Yale University, New Haven, 1990).

    Google Scholar 

  29. Jones, T. A. Acta Crystallogr. A34, 931–935 (1978).

    Article  Google Scholar 

  30. Bernstein, F. C. et al. J. molec. Biol. 122, 535–542 (1977).

    Article  Google Scholar 

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Bode, W., Gomis-Rüth, F., Huber, R. et al. Structure of astacin and implications for activation of astacins and zinc-ligation of collagenases. Nature 358, 164–167 (1992). https://doi.org/10.1038/358164a0

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