Skip to main content
Log in

Assessment of genetic diversity in selected breeding lines and cultivars of canola quality Brassica juncea and their implications for canola breeding

  • Published:
Euphytica Aims and scope Submit manuscript

Abstract

AFLP markers were used to assess the genetic diversity of 77 breeding lines from three of the world's major canola qualityBrassica juncea breeding programs from Canada (Agriculture and Agri-Food Canada and Saskatchewan Wheat Pool) and Australia (Agriculture Victoria). The objectives of the paper were to assess the genetic diversity within and between these three breeding programs and to assess genetic diversity of the canola quality germplasm as compared to mustard quality B. juncea. Fifteen lines of mustard quality B. juncea from India, China, Russia and Australia were also included in the investigation. Ten EcoR1/Mse1 based primer pairs generated 751 scorable fragments with an average of 26 polymorphic bands per primer pair (35%). Similarity coefficients were calculated using the Simple Matching coefficient and adendrogram was developed using the UPGMA procedure, resulting in germplasm being partitioned into five main groups. Line specific markers were discovered that have potential in enhancing the efficiency of individual breeding programs using breeding techniques like accelerated backcrossing. Further understanding the genetic diversity within and between programs has implications for future breeding and collaboration within and between the three programs.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anonymous, 2002. Procedures of the Western Canada Can-ola/Rapeseed Recommending Committee for the evaluation and recommendation for registration of canola/rapeseed candidate cultivars in western Canada, 31 pp.

  • Beckman, J.S. & M. Soller, 1983. Restriction fragment length poly-morphism in genetic improvement: methodologies, mapping and costs. Theor Appl Genet 67: 35–43.

    Article  Google Scholar 

  • Burton, W.A., S.J. Pymer, P.A. Salisbury, J.T.O. Kirk & R.N. Oram, 1999. Performance of Australian canola quality Indian mus-tard breeding lines. Proc 10th Int Rapeseed Congress, Canberra, Australia. CD Rom.

  • Corbellini, M., M. Perenzin, M. Accerbi, P. Vaccino & B. Borghi, 2002. Genetic diversity in bread wheat, as revealed by coeffi-cient of parentage and molecular markers, and its relationship to hybrid performance. Euphytica 123: 273–285.

    Article  CAS  Google Scholar 

  • Diverat, I., E. Margale & G. Thomas, 1999. RAPD markers on seed bulks efficiently assess the genetic diversity of Brassica oleracea L. collection. Theor Appl Genet 98: 1029–1035.

    Article  Google Scholar 

  • Downey, R.K., 1990. Brassica oilseed breeding – acheivements and opportunities. Plant Breed Abstr 60: 1165–1170.

    Google Scholar 

  • Downey, R.K. & S.R. Rimmer, 1993. Agronomic improvement in oilseed Brassicas. Adv Agron 50: 1–66.

    Article  Google Scholar 

  • Johannessen, M.M., T.N. Mikkelsen & R.B. Jorgensen, 2002. CO2 exploitation and genetic diversity in winter varieties of oilseed rape (Brassica napus); varieties of tomorrow. Euphytica 128: 75–86.

    Article  Google Scholar 

  • Kirk, J.T.O. & R.N. Oram, 1981. Isolation of erucic acid free lines of Brassica juncea: Indian mustard now a potential oilseed crop in Australia. J Aust Inst Agric Sci 47: 51–52.

    CAS  Google Scholar 

  • Lionneton, E., S. Ravera, L. Sanchez, G. Aubert, R. Delourme & S. Ochatt, 2002. Development of and AFLP based linkage map and localization of QTL's for seed fatty acid content in condiment mustard (Brassica juncea). Genome 45: 1203–1215.

    Article  PubMed  CAS  Google Scholar 

  • Lombard, V., C.P. Baril, P. Dubreuil, F. Blouet & D. Zhang, 2000. Genetic relationships and fingerprinting of rapeseed cultivars by AFLP: Consequences for varietal registration. Crop Sci 40: 1417–1425.

    Article  CAS  Google Scholar 

  • Lombard, V., B. Tireau, F. Blouet, D. Zhang & C.P. Baril, 2002. Uselfulness of AFLP markers to estimate varietal homogen-eity of rapeseed inbred line varieties in the context of plant registration and protection. Euphytica 125: 121–127.

    Article  CAS  Google Scholar 

  • Love, H.K., G. Rakow, J.P. Raney & R.K. Downey, 1990. The development of low glucosinolate mustard. Can J Plant Sci 70: 419–424.

    Article  CAS  Google Scholar 

  • Mantel, N.A., 1967. The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209–220.

    PubMed  CAS  Google Scholar 

  • Negi, M.S., M. Devic, M. Delseny & M. Lakshmikumaran, 2000. Identification of AFLP fragments linked to seed coat colour in Brassica juncea and conversion to a SCAR marker for rapid selection. Theor Appl Genet 101: 146–152.

    Article  CAS  Google Scholar 

  • Oram, R.N., P.A. Salisbury, J.T.O. Kirk & W.A. Burton, 1999. Brassica juncea breeding In: P.A. Salisbury, T.D. Potter, G. Mc-Donald & A.G. Green (Eds.), Canola in Australia: The First Thirty Years, pp. 37–40. Organising Committee of the 10th International Rapeseed Congress, Canberra, Australia.

    Google Scholar 

  • Plieske, J. & D. Struss, 2001. Microsatellite markers for gen-ome analysis in Brassica. I. Development in Brassica napus and abundance in Brassicaceae species. Theor Appl Genet 102: 689–694.

    Article  CAS  Google Scholar 

  • Potts, D.J., G.W. Rakow & D.R. Males, 1999. Canola-quality Brassica juncea, a new oilseed crop for the Canadian prairies. Proceedings 10th International Rapeseed Congress, Canberra, Australia. CD Rom.

  • Powell, W., M. Morgante, C. Andre, M. Hanafey, J. Vogel & S. Tingey, 1996. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol Breed 2: 225–238.

    Article  CAS  Google Scholar 

  • Pradhan, A.K., V. Gupta, A. Mukhopadhyay, N. Arumugam, Y.S. Sodhi & D. Pental, 2003. A high density linkage map in Brassica juncea (Indian mustard) using AFLP and RFLP markers. Theor Appl Genet 106: 607–614.

    PubMed  CAS  Google Scholar 

  • Rakow, G. & J.P. Raney, 1995. Field performance of canola qual-ity Brassica juncea. Proceedings 9th International Rapeseed Congress, Cambridge, UK. 2: 228–230.

    Google Scholar 

  • Rohlf, F.J., 2002. NTSYS-pc. Numerical Taxonomy and Multivari-ate Analysis System, Version 2.1. Applied Biostatistics, New Yor k.

  • Scarth, R., 1995. Developments in breeding of edible oil in Brassica napus and B. rapa. Proceedings 9th International Rapeseed Congress, Cambridge, UK. 2: 377–382

  • Schneider, S., D. Roessli & L. Excoffier, 2000. Arlequin ver 2000: A software for population genetic data analysis. Genetic and Biometry Laboratory, University of Geneva, Switzerland.

    Google Scholar 

  • Servin, B. & F. Hospita, 2002. Optimal positioning of markers to control genetic background in marker-assisted backcrossing. J Hered 93: 214–217.

    Article  PubMed  CAS  Google Scholar 

  • Srivastava, A., V. Gupta, D. Pental & A.K. Pradhan, 2001. AFLP-based genetic diversity assessment amoungst agronomically im-portant natural and some newly synthesized lines of Brassica juncea. Theor Appl Genet 102: 193–199.

    Article  CAS  Google Scholar 

  • Tautz, D., 1989. Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Res 17: 6463–6471.

    PubMed  CAS  Google Scholar 

  • Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van de Lee, M. Hornes, J.P. Frijters, J. Peleman, M. Kuiper & M. Zabeau, 1995. AFLP: A new fingerprinting technique for DNA fingerprinting. Nucleic Acids Res 23: 4407–4414.

    PubMed  CAS  Google Scholar 

  • Williams, J.G.K., A.R. Kubelik, K.J. Livak, J.A. Rafalski, S.V. Tingey, 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18: 6531–6535.

    PubMed  CAS  Google Scholar 

  • Woods, D.L., J.J. Capcara & R.K. Downey, 1991. The potential of mustard (Brassica juncea (L.) Coss) as an edible oil crop on the Canadian Prairies. Can J Plant Sci 71: 195–198.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Burton, W., Ripley, V., Potts, D. et al. Assessment of genetic diversity in selected breeding lines and cultivars of canola quality Brassica juncea and their implications for canola breeding. Euphytica 136, 181–192 (2004). https://doi.org/10.1023/B:EUPH.0000030668.62653.0d

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/B:EUPH.0000030668.62653.0d

Navigation