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The Arabidopsis thaliana PPX/PP4 phosphatases: molecular cloning and structural organization of the genes and immunolocalization of the proteins to plastids

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Abstract

The PPX/PP4 Ser/Thr protein phosphatases belong to the type 2A phosphatase subfamily and are present in most eukaryotic organisms. We have previously isolated two closely related DNAs encoding PPX isoforms (PPX-1 and PPX-2) of Arabidopsis thaliana. Here we report the molecular cloning of the genes encoding these proteins. The genes PPX-1 and PPX-2 are composed of eight exons and seven introns located at equivalent positions related to the coding sequences. Whereas the intron-exon organization of the PPX genes is completely different from that of the PP2A-3/PP2A-4 A. thaliana family, specific intron-exon boundaries are conserved among PPX genes from distantly related organisms. Based on GUS expression, both PPX genes show the same spatial and temporal pattern of expression: they are expressed in all the organs and tissues analyzed, and from the earliest stage of development. When PPX proteins were localized to the root in semi-thin methacrylate sections by immunofluorescence, staining was predominantly confined to small organelles, shown to be plastids by co-localization of PPX and ferredoxin. Interestingly, only some ferredoxin-positive plastids were also PPX-positive, and PPX staining was consistently brighter in the epidermis. The localization was confirmed with immunogold and electron microscopy. Our results suggest that, despite its strong sequence conservation, PPX in plants functions differently than in animals.

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References

  • An, G. 1987. Binary Ti vectors for plant transformation and promoter analysis. Meth. Enzymol. 153: 292–305.

    Google Scholar 

  • Ariño, J., Perez-Callejón, E., Cunillera, N., Camps, M., Posas, F. and Ferrer, A. 1993. Protein phosphatases in higher plants: multiplicity of type 2A protein phosphatases in Arabidopsis thaliana. Plant Mol Biol 21: 475–485.

    Article  PubMed  Google Scholar 

  • Baskin, T.I., Busby, C.H., Fowke, L.C., Sammut, M. and Gubler, F. 1992. Improvements in immunostaining samples embedded in methacrylate: localization of microtubules and other antigens throughout developing organs in plants of diverse taxa. Planta 187: 405–413.

    Google Scholar 

  • Baskin, T.I. and Wilson, J.E. 1997. Inhibitors of protein kinases and phosphatases alter root morphology and disorganize cortical microtubules. Plant Physiol. 113: 493–502.

    PubMed  Google Scholar 

  • Bechtold, N., Ellis, J. and Pelletier, G. 1993. In planta Agrobacterium mediated gene transfer by infiltration of adult Arabidopsis thaliana plants. CR Acad. Sci. Paris/Life Sci. 316: 1194–1199.

    Google Scholar 

  • Brewis, N.D. and Cohen P.T.W. 1992. Protein phosphatase X has been highly conserved during mammalian evolution. Biochim. Biophys. Acta 1171: 231–233.

    PubMed  Google Scholar 

  • Brewis, N.D., Street, A.J., Prescott A.R. and Cohen P.T.W. 1993. PPX, a novel protein serine threonine phosphatase localized to centrosomes. EMBO J. 12: 987–996.

    PubMed  Google Scholar 

  • Brown, J.W.S., Smith, P. and Simpson, C.G. 1996. Arabidopsis consensus intron sequences. Plant Mol. Biol. 32: 531–535.

    Google Scholar 

  • Casamayor, A., Pérez-Callejón, E., Pujol, G., Ariño, J. and Ferrer. A. 1994. Molecular characterization of a fourth isoform of the catalytic subunit of protein phosphatase 2A from Arabidopsis thaliana. Plant Mol. Biol. 26: 523–528.

    PubMed  Google Scholar 

  • Cohen, P. 1989. The structure and regulation of protein phosphatases. Annu. Rev. Biochem. 58: 453–508.

    PubMed  Google Scholar 

  • Cohen, P.T.W. 1997. Novel protein serine/threonine phosphatases: variety is the spice of life. Trends Biochem. Sci. 22: 245–251.

    PubMed  Google Scholar 

  • Dombràdi, V. 1997. Comparative analysis of Ser/Thr protein phosphatases. Trends Comp. Biochem. Physiol. 3: 23–48.

    Google Scholar 

  • Emes, M.J. and Tobin, A.K. 1993. Control of metabolism and development in higher plant plastids. Int. Rev. Cytol. 145: 149–216.

    Google Scholar 

  • Freitag, P.C.G., Hemerly, A.S., Van Montagu, M. and Inzé, D. 1982. Biosynthesis of mitochondrial porin and insertion into the outer mitochondrial membrane of Neurospora crassa. Eur. J.Biochem. 126: 197–202.

    PubMed  Google Scholar 

  • Grimm, B., Ish-Shalom, D., Even, D., Glaczinski, H., Ottersbach, P., Ohad, I. and Koppstech, K. 1989. The nuclear-coded chloroplast 22-kDa heat-shock protein of Chlamydomonas. Evidence for translocation into the organelle without a processing step. Eur. J. Biochem. 182: 539–546.

    PubMed  Google Scholar 

  • Helps, N.R., Brewis, N.D., Lineruth, K., Davis, T., Kaiser, K. and Cohen, P.T.W. 1998. Protein phosphatase 4 is an essential enzyme required for organization of microtubules at centrosomes in Drosophila embryos. J. Cell Sci. 111: 1331–1340.

    PubMed  Google Scholar 

  • Hu, M.C.-T., Tang-Oxley, Q., Qiu, W., Wang, Y.-P., Mihindukulasuriya, K.A., Afshar, R. and Tan, T.-H. 1998. Protein phosphatase X interacts with c-Rel and stimulates c-Rel/nuclear factor κB activity. J. Biol. Chem. 273: 33561–33565.

    PubMed  Google Scholar 

  • Huang, X., Cheng, A. and Honkaken, R.E. 1997. Genomic organization of the human PP4 gene encoding a serine/threonine protein phosphatase (PP4) suggest a common ancestry with PP2A. Genomics 44: 336–343.

    PubMed  Google Scholar 

  • Jagiello, I., Donella-Deana A., Szczegielniak J., Pinna L.A. and Muszyska, G. 1992. Identification of protein phosphatase activities in maize seedlings. Biochim. Biophys. Acta 1134: 129–136.

    PubMed  Google Scholar 

  • Jefferson, R.A. 1987. Assaying chimeric genes in plants: the GUS gene fusion system. Plant. Mol. Biol. Rep. 5: 387–405.

    Google Scholar 

  • Khew-Goodall, Y., Mayer, R.E., Maurer, F., Stone, S.R. and Hemmings, B.A. 1991. Structure and transcriptional regulation of protein phosphatase 2A catalytic subunit genes. Biochemistry 30: 89–97.

    PubMed  Google Scholar 

  • Mackintosh, C. and Cohen, P. 1989. Identification of high levels of type 1 and type 2A protein phosphatases in higher plants. Biochem. J. 262: 335–339.

    PubMed  Google Scholar 

  • Mackintosh, C., Coggins, J. and Cohen, P. 1991. Plant protein phosphatases. Subcellular distribution, detection of protein phosphatase 2C and identification of protein phosphatase 2A as the major quinate dehydrogenase phosphatase. Biochem J. 273: 733–738.

    PubMed  Google Scholar 

  • Matsumura, T., Sakakibara, H., Nakano, R., Kimata, Y., Sugiyama, T. and Hase, T. 1997. A nitrate-inducible ferredoxin in maize roots. Genomic organization and differential expression of two nonphotosynthetic isoproteins. Plant Physiol. 114: 653–660.

    PubMed  Google Scholar 

  • Miller, M.E. and Chourey, P.S. 1995. Intracellular immunolocalization of adenosine 50-diphosphoglucose pyrophosphorylase in developing endosperm cells of maize. Planta 197: 522–527.

    Google Scholar 

  • Páy, A., Pirck, M., Bögre, L., Hirt, H. and Heberle-Bors, E. 1994. Isolation and characterization of phosphoprotein phosphatase 1 from alfalfa. Mol. Gen. Genet. 244: 176–182.

    PubMed  Google Scholar 

  • Paris, N., Stanley, C.M., Jones, R.L. and Rogers, J.C. 1996. Plant cells contain two functionally distinct vacuolar compartments. Cell 85: 563–572.

    PubMed  Google Scholar 

  • Pérez-Callejón, E., Casamayor, A., Pujol, G., Clua, E., Ferrer A. and Ariño, J. 1993. Identification and molecular cloning of two homologues of protein phosphatase X from Arabidopsis thaliana. Plant Mol. Biol. 23:1177–1185.

    PubMed  Google Scholar 

  • Pérez-Callejón, E., Casamayor, A., Pujol, G., Camps, M., Ferrer, A. and Ariño, J. 1998. Molecular cloning and characterization of two phosphatase 2A catalytic subunit genes from Arabidopsis thaliana. Gene 209: 105–112.

    PubMed  Google Scholar 

  • Picard, A., Capony, J.P., Brautigan, D.L. and Dorée, M. 1989. Involvement of protein phosphatases 1 and 2A in the control of M phase-promoting factor activity in starfish. J. Cell Biol. 109: 3347–3354.

    PubMed  Google Scholar 

  • Pirck, M., Páy, A., Heberle-Bors, E. and Hirt, H. 1993. Isolation and characterization of a phosphoprotein phosphatase type 2A gene from alfalfa. Mol. Gen. Genet. 240: 126–131.

    PubMed  Google Scholar 

  • Prochazka, M., Mochizuki, H., Baier, L.J., Cohen, P.T.W. and Bogardus, C. 1995. Molecular and linkage analysis of type-1 protein phosphatase catalytic beta-subunit gene: lack of evidence for its major role in insulin resistance in Pima Indians. Diabetologia 38: 461–466.

    PubMed  Google Scholar 

  • Pujol, G., Ferrer, A. and Ariño, J. 1998. Protein phosphatases-2A and protein phosphatase X genes in Arabidopsis thaliana. In: J.W. Ludlow (Ed.) Methods in Molecular Biology, Vol. 93: Protein Phosphatase Protocols, Humana Press, Totowa, NJ, pp. 201–212.

    Google Scholar 

  • Rime, H., Huchon, D., Jessus, C., Goris, J., Merlevede, W. and Ozon, R. 1990. Characterization of MPF activation by okadaic acid in Xenopus oocyte. Cell Diff. Dev. 29: 47–58.

    Google Scholar 

  • Rundle, S.J. and Nasrallah, J.B. 1992. Molecular characterization of type 1 serine/threonine phosphatases from Brassica oleracia. Plant Mol. Biol. 20: 367–375.

    PubMed  Google Scholar 

  • Salomon, M., Fischer, K., Flügge, U.-I. and Soll, J. 1990. Sequence analysis and protein import studies of an outer chloroplast envelope polypeptide. Proc. Natl. Acad. Sci. USA 87: 5778–5782.

    PubMed  Google Scholar 

  • Smith, R.D. and Walker, J.C. 1991. Isolation and expression of a maize type 1 protein phosphatase. Plant Physiol. 97: 677–683.

    Google Scholar 

  • Smith, R.D. and Walker, J.C. 1996. Plant protein phosphatases. Annu. Rev. Plant Physiol. 47: 101–125.

    Google Scholar 

  • Smith, R.D., Wilson, J.E., Walker, J.C. and Baskin, T.I. 1994. Protein-phosphatase inhibitors block root hair growth and alter cortical cell shape of Arabidopsis roots. Planta 194: 516–524.

    Google Scholar 

  • Stamey, R.T. and Rundle, S.J. 1995. Characterization of a novel isoform of a type 2A serine/threonine protein phosphatase from Arabidopsis thaliana. Plant Physiol 110: 335.

    Google Scholar 

  • Takeda, S., Mano, S., Ohto, M.A. and Nakamura, K. 1994. Inhibitors of protein phosphatases 1 and 2A block the sugarinducible gene expression in plants. Plant Physiol. 106: 567–574.

    PubMed  Google Scholar 

  • Whatley, J.M. 1983. The ultrastructure of plastids in roots. Int. Rev. Cytol. 85: 175–220.

    Google Scholar 

  • Zimmermann, R., Paluch, W. and Neupert, W. 1979. Cell-free synthesis of cytochrome C. FEBS Lett. 108: 141–146.

    PubMed  Google Scholar 

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Pujol, G., Baskin, T.I., Casamayor, A. et al. The Arabidopsis thaliana PPX/PP4 phosphatases: molecular cloning and structural organization of the genes and immunolocalization of the proteins to plastids. Plant Mol Biol 44, 499–511 (2000). https://doi.org/10.1023/A:1026587405656

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