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Concepts and data models for treatment of duplicate groups and sharing of responsibilities in genetic resources information systems

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Abstract

Concepts for the treatment of duplication and sharing of responsibilities in ex situ collections are developed with regard to the design of a documentation system. Large amounts of duplication are found in European genebanks especially with obsolete cultivars. If internationally registered they will reach several national genebanks from respective cultivar registration authorities collaborating with genetic resources collections. Rationalisation of collections and reducing work load with duplicates will be a precondition to keep high quality maintenance standards with diminishing resources. Sharing of responsibilities on an accession basis is the preferred procedure within the European Cooperative Programme for Genetic Resources Networks. Central crop databases play an important role in this process. A design of passport data is presented, which allows for compiling and extending information available for duplicate groups (genotypes) without affecting original multicrop passport information provided by holding genebanks for their accessions. Additional descriptors for responsibility, restrictions in availability and storage status agreed on by holders of duplicate accessions within the international considerations are included. Primary responsibility is mainly defined by fulfilling standards of maintenance and providing access to the germplasm. It includes holding a base sample, an active, publicly available sample and a safety duplicate at partner genebanks. Considerable reduction of work load without discarding of accessions can be achieved by setting duplicates to a reference status implying maintenance of only a base sample with no or restricted public access.

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References

  • Anonymous 1994. Genebank Standards. Food and Agriculture Organization of the United Nations, Rome. International Plant Genetic Resources Institute, Rome, Italy.

  • Anonymous 2000a. Appendix I. The identification of most original samples (MOS). In: Maggioni L., Marum P., Sackville Hamilton N.R., Hulden M. and Lipman E. (eds), Report of a Working Group on Forages. Seventh meeting, 18-20 November 1999, Elvas, Portugal. International Plant Genetic Resources Institute, Rome, Italy, pp. 214-217.

  • Anonymous 2000b. Discussions and recommendations. In: Mag-gioni L., Frese L., Germeier C. and Lipman E. (eds), Report of Working Group on Beta. First meeting, 9-10 September 1999, Broom's Barn, Highham, Bury St. Edmunds, United Kingdom. International Plant Genetic Resources Institute, Rome, Italy.

  • Bücken S. and Frese L. 1999. Differential and hierarchical seed stock management - a new alternative for the management of large-sized genebank holdings. In: Gass T., Frese L., Begemann F. and Lipman E. (eds), Implementation of the Global Plan of Action in Europe-Conservation and Sustainable Utilization of Plant Genetic Resources for Food and Agriculture. Proceedings of the European Symposium, 30 June - 3 July 1998, Braunschweig, Germany. International Plant Genetic Resources Institute, Rome, Italy, pp. 96-101.

    Google Scholar 

  • Bücken S. and Frese L. 2000. Informationssystem fur eine Samm-lung pflanzengenetischer Ressourcen (Genbank)-Konzept und Implementierung. Zeitschrift fur Agrarinformatik 3/00: 47-53.

    Google Scholar 

  • Engelmann F. and Engels J. 1999. Efforts to sustain ex situ collections. Technological aspects. In: Gass T., Frese L., Begemann F. and Lipman E. (eds), Implementation of the Global Plan of Action in Europe - Conservation and Sustain-able Utilization of Plant Genetic Resources for Food and Agriculture. Proceedings of the European Symposium, 30 June - 3 July 1998, Braunschweig, Germany. International Plant Genetic Resources Institute, Rome, Italy, pp. 88-95.

    Google Scholar 

  • FAO (Food and Agriculture Organisation of the United Nations) 1996. The state of the world's plant genetic resources for food and agriculture. Background documentation prepared for the International Technical Conference on Plant Genetic Resources, Leipzig, Germany, 17-23 June, 1996.

  • Gass T. and Begemann F. 1999. International efforts to sustain ex situ collections. options for a closer cooperation in Europe. In: Gass T., Frese L., Begemann F. and Lipman E. (eds), Implementation of the Global Plan of Action in Europe - Conservation and Sustainable Utilization of Plant Genetic Resources for Food and Agriculture. Proceedings of the Euro-pean Symposium, 30 June - 3 July 1998, Braunschweig, Germany. International Plant Genetic Resources Institute, Rome, Italy, pp. 109-115.

    Google Scholar 

  • Gass T., Lipman E. and Maggioni L. 1997. The role of central crop databases in the European Cooperative Programme for Crop Genetic Resources Networks (ECP/GR). In: Lipman E., Jongen M.W.M., van Hintum Th. J.L., Gass T. and Maggioni L. (eds), Central Crop Databases. Tools for Plant Genetic Resources Management. CGN, Wageningen, The Netherlands. International Plant Genetic Resources Institute, Rome, Italy, pp. 20-25.

    Google Scholar 

  • Hardon J. 1999. Plant genetic resources conservation in Europe. a retrospective. In: Gass T., Frese L., Begemann F. and Lipman E. (eds), Implementation of the Global Plan of Action in Europe - Conservation and Sustainable Utilization of Plant Genetic Resources for Food and Agriculture. Proceedings of the European Symposium, 30 June - 3 July 1998, Braunschweig, Germany. International Plant Genetic Resources Institute, Rome, Italy, pp. 3-7.

    Google Scholar 

  • Hazekamp Th., Serwinski J. and Alercia A. 1997. Multicrop passport descriptors. In: Lipman E., Jongen M.W.M., van Hintum Th.J.L., Gass T. and Maggioni L. (eds), Central Crop Databases. Tools for Plant Genetic Resources Management. CGN,Wageningen, The Netherlands International Plant Genetic Resources Institute, Rome, Italy, pp. 35-39 and pp. 75 78.

    Google Scholar 

  • Hintum Th.J.L. and Knüpffer H. 1995. Duplication within and between germplasm collections. I. Identifying duplication on the basis of passport data. Genetic Resources and Crop Evolution 42: 127-133.

    Google Scholar 

  • Hintum Th.J.L. and Visser D.L. 1995. Duplication within and between germplasm collections. II. Duplication in four Euro-pean barley collections. Genetic Resources and Crop Evolution 42: 135-145.

    Google Scholar 

  • Knüpffer H., Frese L. and Jongen M.W.M. 1997. Using central crop databases. searching for duplicates and gaps. In: Lipman E., Jongen M.W.M., van Hintum Th.J.L., Gass T. and Maggioni L. (eds), Central Crop Databases. Tools for Plant Genetic Resources Management. CGN, Wageningen, The Netherlands International Plant Genetic Resources Institute, Rome, Italy, pp. 59-68.

    Google Scholar 

  • Koch G. and Loney K. 1995. Oracle. the Complete Reference. 3rd edn. McGraw-Hill, Berkeley, Calif.

    Google Scholar 

  • Lehmann, C., 1990: Hundert Jahre Sammlung und Nutzung von Landsorten-zur Erinnerung an Emanuel Ritter von Proskowetz und Franz Schindler. In: Sicherung und Nutzbarmachung pflanzengenetischer Ressourcen. Gemeinsames Kolloquium, 3.-5. Juli 1990, Braunschweig-Gatersleben, pp.10–22. Institut fur Pflanzenbau und Pflanzenzuchtung (FAL) und Zentralinstitut fur Genetik und Kulturpflanzenforschung (AdW).

  • Loskutov I.G. 1999. N.I. Vavilov and his Institute. IPGRI, Rome, Italy.

    Google Scholar 

  • Lyman J.M. 1984. Progress and planning for germplasm conserva-tion of major food crops. FAO/IBPGR Plant Genetic Resources Newsletter 60: 3-21.

    Google Scholar 

  • Moule C. 1964. Les variétés d'avoine cultivées en France. Institute National de la Recherche Agronomique, 286 pp.

  • Mowder J.D. and Stoner A.K. 1989. Information systems. Plant Breeding Review 7: 57-65.

    Google Scholar 

  • Trehane P., Brickell C.D., Baum B.R., Hetterscheid W.L.A., Leslie A.C., McNeill J. et al. (eds) 1995. International Code of Nomenclature for Cultivated Plants, ICNCP or Cultivated Plant Code Adopted by the International Commission for the Nomen-clature of Cultivated Plants, International Association for Plant Taxonomy (Europe) acting for and on behalf of the Internation-al Commission for the Nomenclature of Cultivated Plants. Quarterjack Publishing, Wimborne, UK.

    Google Scholar 

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Correspondence to Christoph Ulrich Germeier.

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Germeier, C.U., Frese, L. & Bücken, S. Concepts and data models for treatment of duplicate groups and sharing of responsibilities in genetic resources information systems. Genetic Resources and Crop Evolution 50, 693–705 (2003). https://doi.org/10.1023/A:1025030913231

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