Abstract
We have determined the structure of an Shc-derivedphosphotyrosine-containing peptide complexed with Grb2 SH2 based on intra-and intermolecular NOE correlations observed by a series of isotope-filteredNMR experiments using a PFG z-filter. In contrast to an extendedconformation of phosphotyrosine-containing peptides bound to Src, Syp andPLC γ SH2s, the Shc-derived peptide formed a turn at the +1 and +2positions next to the phosphotyrosine residue. Trp121, locatedat the EF1 site of Grb2 SH2, blocked the peptide binding in an extendedconformation. The present study confirms that eachphosphotyrosine-containing peptide binds to the cognate SH2 with a specificconformation, which gives the structural basis for the binding specificitybetween SH2s and target proteins.
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Bax, A. and Subramanian, S. (1986) J. Magn. Reson., 67, 565–569.
Bax, A., Clore, G.M. and Gronenborn, A.M. (1990) J. Magn. Reson., {vn88}, 425–431.
Bax, A. and Ikura, M. (1991) J. Biomol. NMR, 1, 99–104.
Breeze, A.L., Kara, B.V., Barratt, D.G., Anderson, M., Smith, J.C., Luke, R.W., Best, J.R. and Cartlidge, S.A. (1996) EMBO J., 15, 3579–3589.
Buday, L. and Downward, J. (1993) Cell, 73, 611–620.
Cavanagh, J., Fairbrother, W.J., Palmer III, A.G. and Skelton, N.J. (1996) Protein NMR Spectroscopy, Principles and Practice, Academic Press, New York, NY, U.S.A.
Clubb, R.T., Thanabal, V. and Wagner, G. (1992) J. Biomol. NMR, {vn2}, 203–210.
Delaglio, F., Grzesiek, S., Vuister, G.W., Zhu, G., Pfeifer, J. and Bax, A. (1995) J. Biomol. NMR, 6, 277–293.
Eck, M.J., Shoelson, S.E. and Harrison, S.C. (1993) Nature, 362, 87–91.
Grzesiek, S. and Bax, A. (1992a) J. Magn. Reson., 96, 432–440.
Grzesiek, S. and Bax, A. (1992b) J. Magn. Reson., 99, 201–207.
Grzesiek, S. and Bax, A. (1992c) J. Am. Chem. Soc., 114, 6291–6293.
Grzesiek, S., Anglister, J. and Bax, A. (1993) J. Magn. Reson., B101, 114–119.
Kay, L.E., Ikura, M., Tschudin, R. and Bax, A. (1990) J. Magn. Reson., 89, 496–514.
Lee, C.-H., Kominos, D., Jacques, S., Margolis, B., Schlessinger, J., Shoelson, S.E. and Kuriyan, J. (1994) Structure, 2, 423–438.
Lowenstein, E.J., Daly, R.J., Batzer, A.G., Li, W., Margolis, B., Lammers, R., Ullrich, A., Skolnik, E.Y., Bar-Sagi, D. and Schlessinger, J. (1992) Cell, 70, 431–442.
Marengere, L.E.M., Songyang, Z., Gish, G.D., Schaller, M.D., Parsons, J.T., Stern, M.J., Cantley, L.C. and Pawson, T. (1994) Nature, 369, 502–505.
Marion, D., Driscoll, P.C., Kay, L.E., Wingfield, P.T., Bax, A., Gronenborn, A.M. and Clore, G.M. (1989) Biochemistry, 28, 6150–6156.
Mikol, V., Baumann, G., Keller, T.H., Manning, U. and Zurini, M.G.M. (1995) J. Mol. Biol., 246, 344–355.
Muhandiram, D.R. and Kay, L.E. (1994) J. Magn. Reson., B103, 203–216.
Narula, S.S., Yuan, R.W., Adams, S.E., Green, O.M., Green, J., Philips, T.B., Zydowsky, L.D., Botfield, M.C., Hatada, M., Laird, E.R., Zoller, M.J., Karas, J.L. and Dalgarno, D.C. (1995) Structure, {vn3}, 1061–1073.
Nicholls, A., Sharp, K. and Honig, B. (1991) Proteins Struct. Funct. Genet., 11, 281–296.
Ogura, K., Terasawa, H. and Inagaki, F. (1996) J. Biomol. NMR, 8, 492–498.
Pascal, S.M., Singer, A.U., Gish, G., Yamazaki, T., Shoelson, S.E., Pawson, T., Kay, L.E. and Forman-Kay, J.D. (1994) Cell, 77, 461–472.
Pronk, G.J., De Vries-Smits, A.M.M., Buday, L., Downward, J., Maassen, J.A., Medema, R.H. and Bos, J.L. (1994) Mol. Cell. Biol., {vn14}, 1575–1581.
Rahuel, J., Gay, B., Erdmann, D., Strauss, A., García-Echeverría, C., Furet, P., Caravatti, G., Fretz, H., Schoepfer, J. and Grütter, M.G. (1996) Nat. Struct. Biol., 3, 586–589.
Rozakis-Adcock, M., McGlade, J., Mbamalu, G., Pelicci, G., Daly, R., Li, W., Batzer, A., Thomas, S., Brugge, J., Pelicci, P.G., Schlessinger, J. and Pawson, T. (1992) Nature, 260, 689–692.
Schlaepfer, D.D., Hanks, S.K., Hunter, T. and Van der Geer, P. (1994) Nature, 372, 786–791.
Seip, S., Balbach, J. and Kessler, H. (1992) J. Magn. Reson., 100, 406–410.
Skolnik, E.Y., Batzer, A., Li, N., Lowenstein, L.E., Mohammadi, M., Margolis, B. and Schlessinger, J. (1992) Nature, 260, 689–692.
Smallcombe, S.H. (1993) J. Am. Chem. Soc., 115, 4776–4785.
Songyang, Z., Shoelson, S.E., McGlade, J., Olivier, P., Pawson, T., Bustelo, X.R., Barbacid, M., Hanafusa, H., Yi, T., Ren, R., Baltimore, D., Ratnofsky, S., Feldman, R.A. and Cantley, L.C. (1994) Mol. Cell. Biol., 14, 2777–2785.
Thornton, K.H., Mueller, W.T., McConnell, P., Zhu, G., Saltiel, A.R. and Thanabal, V. (1996) Biochemistry, 35, 11852–11864.
Waksman, G., Kominos, D., Robertson, S.C., Pant, N., Baltimore, D., Birge, R.B., Cowburn, D., Hanafusa, H., Mayer, B.J., Overduin, M., Resh, M.D., Rios, C.B., Silverman, L. and Kuriyan, J. (1992) Nature, 358, 646–653.
Waksman, G., Shoelson, S.E., Pant, N., Cowburn, D. and Kuriyan, J. (1993) Cell, 72, 779–790.
Xu, R.X., Word, J.M., Davis, D.G., Rink, M.J., Willard Jr., D.H. and Gampe Jr., R.T. (1995) Biochemistry, 34, 2107–2121.
Zho, M.-M., Meadows, R.T., Logan, T.M., Yoon, H.S., Wade, W.S., Ravichandran, K.S., Burakoff, S.J. and Fesik, S.W. (1995) Proc. Natl. Acad. Sci. USA, 92, 7784–7788.
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Ogura, K., Tsuchiya, S., Terasawa, H. et al. Conformation of an Shc-derived phosphotyrosine-containing peptide complexed with the Grb2 SH2 domain. J Biomol NMR 10, 273–278 (1997). https://doi.org/10.1023/A:1018340506337
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DOI: https://doi.org/10.1023/A:1018340506337