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A Method for Estimating Penetrance of Pathogenic Mutations in a Mitochondrial Genome

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Abstract

Variation in the age of onset is typical of many mitochondrial diseases. The estimation of penetrance of deleterious mtDNA mutations causing such diseases is usually conducted on samples of individuals whose age exceeds the maximum age of the disease manifestation. In the case of rare diseases, samples of sufficient size sometimes cannot be formed. In this study, we propose a method for estimating penetrance involving individuals of any age. The efficiency of the method is demonstrated using Leber hereditary optic neuropathy as an example. It is shown that the method provides an unbiased estimate of penetrance and considerably reduces the error of this estimate in comparison with a sample including individuals whose age exceeds the maximum age of disease manifestation.

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REFERENCES

  1. Wallace, D.C., Singh, G., Lott, M., et al., Mitochondrial DNA Mutation Associated with Leber's Hereditary Optic Neuropathy, Science, 1988, vol. 242, pp. 1427-1430.

    Google Scholar 

  2. Shoffner, J.M. and Wallace, D.C., Oxidative Phosphorylation Diseases and Mitochondrial DNA Mutations: Diagnosis and Treatment, Annu. Rev. Nutr., 1994, vol. 14, pp. 535-568.

    Google Scholar 

  3. Kogelnik, A., Lott, M., Brown, M.D., et al., MITOMAP: A Human Mitochondrial Genome Database, 1998 Update, Nucleic Acids Res., 1998, vol. 26, pp. 112-115.

    Google Scholar 

  4. Wallace, D.C., Brown, M.D., and Lott, M., Mitochondrial DNA Variation in Human Evolution and Disease, Gene, 1999, vol. 238, pp. 211-230.

    Google Scholar 

  5. Cavelier, L., Gyllensten, U., and Dahl, N., Intrafamilial Variation in Leber Hereditary Optic Neuroretinopathy Revealed by Direct Mutation Analysis, Clin. Genet., 1993, vol. 43, pp. 69-72.

    Google Scholar 

  6. Nakamura, M., Fujikwara, Y., and Yamamoto, M., Homoplasmic and Exclusive ND4 Gene Mutation in Japanese Pedigrees with Leber's Disease, Invest. Ophth. Vis. Sci., 1993, vol. 34, pp. 488-495.

    Google Scholar 

  7. Brown, M.D., Torroni, A., Reckord, C.L., and Wallace, D.C., Phylogenetic Analysis of Caucasian 11 778- Positive and 11 778-Negative Leber's Hereditary Optic Neuropathy Patients Indicates Multiple Independent Occurrences of the Common Primary Mitochondrial DNA Mutations, Hum. Mutat., 1995, vol. 6, pp. 311-325.

    Google Scholar 

  8. Howell, N., Kubacka, I., Halvorson, S., et al., Phylogenetic Analysis of the Mitochondrial Genomes from Leber Hereditary Optic Neuropathy Pedigrees, Genetics, 1995, vol. 140, pp. 285-302.

    Google Scholar 

  9. Mashima, Y., Hiida, Y., and Oguchi, Y., Lack of Differences among Mitochondrial DNA in Family Members with Leber's Hereditary Optic Neuropathy and Differing Visual Outcomes, J. Neuro-Ophth., 1995, vol. 15, pp. 15-19.

    Google Scholar 

  10. Oostra, R.J., Bolhuis, P.A., Wijburg, F.A., and Bleeker-Wagemakers, E.M., Leber's Optic Nerve Atrophy, a Mitochondrial Hereditary Disease, Nederlands Tijd-schrift Voor Geneeskunde, 1995, vol. 139, pp. 1327-1331.

    Google Scholar 

  11. Mackey, D.A. and Buttery, R.G., Leber Hereditary Optic Neuropathy in Australia, Austr. New Zeal. J. Ophthalmol., 1992, vol. 20, pp. 177-184.

    Google Scholar 

  12. Shoffner, J.M. and Wallace, D.C., Heart Disease and Mitochondrial DNA Mutations, Heart Dis. Stroke, 1992, vol. 1, pp. 235-241.

    Google Scholar 

  13. Katagiri, H., Asano, T., Ishihara, H., et al., Mitochondrial Diabetes Mellitus: Prevalence and Clinical Characterization of Diabetes Due to Mitochondrial tRNA (Leu(UUR)) Gene Mutation in Japanese Patients, Dia-betologia, 1994, vol. 37, pp. 504-510.

    Google Scholar 

  14. Hotta, Y., Fujiki, K., Hayakawa, M., et al., Clinical Features of Japanese Leber's Hereditary Optic Neuropathy with 11 778 Mutation of Mitochondrial DNA, Jpn. J. Ophthalmol., 1995, vol. 39, pp. 96-108.

    Google Scholar 

  15. Leo-Kottler, B., Christ-Adler, M., Reck, B., et al., Correlation between Clinical and Molecular Genetic Findings in Leber's Optic Atrophy, Ophthalmology, 1995, vol. 92, pp. 86-92.

    Google Scholar 

  16. Feller, V., Vvedenie v teoriyu veroyatnostei i ee prilozheniya (Introduction to the Probability Theory and Its Applications), Moscow: Mir, 1967, vol. 2.

    Google Scholar 

  17. Elston, R.C. and George, V.T., Age of Onset, Age of Examination, and Other Covariates in the Analysis of Family Data, Genet. Epidemiol., 1989, vol. 6, pp. 217-220.

    Google Scholar 

  18. Zhadanov, S.I., Atamanov, V.V., and Sukernik, R.I., Clinical Genetic Analysis of Families with Leber's Heredi-tary Optic Neuropathy, Materialy 10 nauchno-prak-ticheskoi konferentsii vrachei “Aktual'nye voprosy sovremennoi meditsiny” (Novosibirsk, 2000 g.) (Proc. 10th Conf. of Physicians “Urgent Problems of Modern Medicine” (Novosibirsk, 2000)), Novosibirsk, 2000, pp. 187-188.

  19. Brown, M.D., Zhadanov, S.I., Allen, J.C., et al., Novel mtDNA Mutations and Oxidative Phosphorylation Dysfunction in Russian LHON Families, Hum. Genet., 2001, vol. 109, pp. 33-39.

    Google Scholar 

  20. Kendall, M. and Stewart, A., Statisticheskie vyvody i svyazi (Statistic Conclusions and Associations), Moscow: Nauka, 1973.

    Google Scholar 

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Kirichenko, A.V., Zhadanov, S.I. & Axenovich, T.I. A Method for Estimating Penetrance of Pathogenic Mutations in a Mitochondrial Genome. Russian Journal of Genetics 38, 834–836 (2002). https://doi.org/10.1023/A:1016356108552

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