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Interspecific Relationships among Charrs Based on Phylogenetic Analysis of Nuclear Growth Hormone Intron Sequences

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Abstract

DNA samples were obtained from six charr species: Salvelinus alpinus, S. malma, S. confluentus, S. leucomaenis, S. namaycush and S. fontinalis and two outgroups: Salmo salar and S. trutta. The C and D introns from the duplicate growth hormone loci (GH1 and GH2) were amplified using the polymerase chain reaction and sequenced from each of the species. Phylogenetic analyses with and without gaps were performed using the beta version of PAUP. The GH introns are evolving relatively slowly, so the data were combined with sequences from the ITS1 and ITS2 for a phylogenetic analysis of the charr species. The GH intron data and the combined data supported two groups of sister species among charrs: S. alpinus and S. malma, and S. confluentus and S. leucomaenis.

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References cited

  • Allendorf, F.W. & G.H. Thorgaard. 1984. Tetraploidy and the evolution ofsalmonid fishes. pp. 1–53. In: B.J. Turner (ed.) Evolutionary Genetics of Fishes, Plenum Press, New York.

    Google Scholar 

  • Baxter, J.S., E.B. Taylor, R.H. Devlin, J. Hagen & J.D. McPhail. 1997.Evidence for natural hybridization between DollyVarden (Salvelinus malma) and bull trout (Salvelinus confluentus) in a northcentral British Columbia watershed. Can. J. Fish. Aquat. Sci. 54: 421–429.

    Google Scholar 

  • Behnke, R.J.1980. A systematic review of the genus Salvelinus. pp. 441–481. In: E.K. Balon (ed.) Charrs, Salmonid Fishes of the Genus Salvelinus, Dr W. Junk Publishers, The Hague.

  • Behnke, R.J. 1984.Organizing the diversity of the Arctic charr complex. pp. 3–22. In: L. Johnson & B.L. Burns (ed.) Biology of the Arctic Charr, University of Manitoba Press, Winnipeg.

    Google Scholar 

  • Behnke, R.J. 1989. Interpreting the phylogeny of Salvelinus. pp. 35–48. In: H. Kawanabe, F. Yamazaki & D.L.G. Noakes (ed.) Biology of Charrs and Masu Salmon, Physiol. Ecol. Japan Spec. Vol. 1, Kyoto.

  • Bernatchez, L., H. Glemet, C.C. Wilson & R.G. Danzmann. 1995. Introgression and fixation of Arctic charr (Salvelinus alpinus) mitochondrial genome in an allopatric population of brook trout (Salvelinus fontinalis). Can. J. Fish Aquat. Sci. 52: 179–185.

    Google Scholar 

  • Cavender, T.M. 1980. Systematics of Salvelinus from the North Pacific Basin. pp. 295–322. In: E.K. Balon (ed.) Charrs, Salmonid Fishes of the Genus Salvelinus, Dr W. Junk Publishers, The Hague.

    Google Scholar 

  • Cavender, T.M. 1984. Cytotaxonomy of North American Salvelinus. pp. 431–445. In: L. Johnson & B.L. Burns (ed.) Biology of the Arctic Charr, University of Manitoba Press, Winnipeg.

    Google Scholar 

  • Cavender, T.M. & S. Kimura. 1989. Cytotaxonomy and interrelationships of Pacific basin Salvelinus. pp. 49–68. In: H. Kawanabe, F. Yamazaki & D.L.G. Noakes (ed.) Biology of Charrs and Masu Salmon, Physiol. Ecol. Japan Spec. Vol. 1, Kyoto.

  • Crane, P.A., L.W. Seeb & J.E. Seeb. 1994. Genetic realtionships among Salvelinus species inferred from allozyme data. Can. J. Fish. Aquat. Sci. 51(Suppl. 1): 182–197.

    Google Scholar 

  • Devlin, R.H. 1993. Sequence of sockeye type 1 and type 2 growth hormone genes and the relationships of rainbow trout with Atlantic and Pacific salmon. Can. J. Fish. Aquat. Sci. 50: 1738–1748.

    Google Scholar 

  • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783–791.

    Google Scholar 

  • Johansen, B., O.C. Johnsen & S. Valla. 1989. The complete nucleotide sequence of the growth-hormone gene from Atlantic salmon (Salmo salar). Gene (Amsterdam) 77: 317–324.

    Google Scholar 

  • McKay, S.J., R.H. Devlin & M.J. Smith. 1996. Phylogeny of Pacific salmon and trout based on growth hormone type-2 (GH2) and mitochondrial NADH dehydrogenase subunit 3 (ND3) DNA sequences. Can. J. Fish. Aquat. Sci. 53: 1165–1176.

    Google Scholar 

  • Oakley, T.H. & R.B. Phillips. 1999. Phylogeny of salmonine fish based on growth hormone introns: Atlantic (Salmo) and Pacific (Oncorhynchus) salmon are not sister taxa. Molecular Phylogenetics and Evolution 11: 381–393.

    Google Scholar 

  • Phillips, R.B., S.A. Manley & T.J. Daniels. 1994. Systematics of the salmonid genus Salvelinus inferred from ribosomal DNA sequences. Can. J. Fish. Aquat. Sci. 51(Suppl. 1): 198–204.

    Google Scholar 

  • Phillips, R.B. & T.H. Oakley. 1997. Evolutionary relationships among salmonid fishes inferred from nuclear and mitochondrial sequences. pp. 145–162. In: T. Kocher & C. Stepien (ed.) Molecular Systematics of Fishes, Academic Press, San Diego.

    Google Scholar 

  • Phillips, R.B., K.A. Pleyte & P.E. Ihssen. 1989a. Patterns of chromosomal nucleolar organizer regions (NOR) variation in fishes of the genus Salvelinus. Copeia 1989: 47–53.

    Google Scholar 

  • Phillips, R.B., L.M. Van Ert & K.A. Pleyte. 1989b. Evolution of nucleolar organizer regions (NORs) and rDNA in fishes of the genus Salvelinus. pp. 429–447. In: H. Kawanabe, F. Yamazaki & D.L.G. Noakes (ed.) Biology of Charrs and Masu Salmon, Physiol. Ecol. Japan. Spec. Vol. 1, Kyoto.

  • Pleyte, K.A., S.D. Duncan & R.B. Phillips. 1992. Evolutionary relationships of the salmonid genus Salvelinus inferred from DNA sequences of the first internal transcribed spacer (ITS 1) of ribosomal DNA. Mol. Phylogenet. Evol.1: 223–230.

    Google Scholar 

  • Stearley, R.F. 1992. Historical ecology of the Salmoninae, with special reference to Oncorhynchus. pp. 622–658. In: R.L. Mayden (ed.) Systematics, Historical Ecology, & North American Freshwater Fishes, Stanford University Press, Stanford.

    Google Scholar 

  • Wilson, C.C. & P.D.N. Hebert. 1993. Natural hybridization between Arctic charr (Salvelinus alpinus) and lake trout (S. namaycush) in the Canadian Arctic. Can. J. Fish. Aquat. Sci. 50: 2652–2658.

    Google Scholar 

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Correspondence to Ruth B. Phillips.

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Westrich, K.M., Konkol, N.R., Matsuoka, M.P. et al. Interspecific Relationships among Charrs Based on Phylogenetic Analysis of Nuclear Growth Hormone Intron Sequences. Environmental Biology of Fishes 64, 217–222 (2002). https://doi.org/10.1023/A:1016001904916

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