Skip to main content
Log in

Nucleotide Sequences of Fragments of 16S rRNA of the Baikal Natural Populations and Laboratory Cultures of Cyanobacteria

  • Published:
Molecular Biology Aims and scope Submit manuscript

Abstract

Nucleotide sequences were determined for the 16S rRNA gene 5"-terminal regions of 29 strains of picoplankton cyanobacteria from the lake Baikal in Russia and four strains from the lake Constance (Bodensee) in Germany. Sequences of a 387-bp region of the gene of cultivated strains designated A, B, C, D, and E had only a few (1–3) substitutions as compared with the 3-27 sequence of the clones obtained earlier by cloning from a pooled sample of Baikalian winter picoplankton. The specific 4-33 sequence obtained earlier from a dominant species of Baikalian picoplankton was not found in cultivated cyanobacteria.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Popovskaya, G.I., Novosti sistematiki nizshikh rastenii (New Data in Lower Plant Systematics), Leningrad: Nauka, 1968, pp. 3–5.

    Google Scholar 

  2. Votintsev, K.K., Mescheryakova, A.I., and Popovskaya, G.I., Krugovorot organicheskogo veshchestva vozere Baikal (Turnover of Organic Substance in Lake Baikal), Novosibirsk: Nauka, 1975.

    Google Scholar 

  3. Bondarenko, N.A. and Guselnikova, N.E., Biol. Nauki, Ser. Gidrobiologya, 1989, vol. 12, pp. 34–36.

    Google Scholar 

  4. Back, R.C., Bolgrien, D.W., Guselnikova, N.E., and Bondarenko, N.A., J. Great Lakes Res., 1991, vol. 17, pp. 194–202.

    Google Scholar 

  5. Nagata, T., Takai, K., Kawanobe, K., et al., J. Plankton Res., 1994, vol. 16, pp. 945–959.

    Google Scholar 

  6. Giovannoni, S.J., Britschgi, T.B., Moyer, C.L., and Field, K.G., Nature, 1990, vol. 345, pp. 60–63.

    Google Scholar 

  7. Ward, D.M., Weller, R., and Bateson, M.M., Nature, 1990, vol. 345, pp. 63–65.

    Google Scholar 

  8. Schmidt, T.M., DeLong, E.F., and Pace, N.R., J. Bacteriol., 1991, vol. 173, pp. 4371–4378.

    Google Scholar 

  9. Fuhrman, J.A., McCallum, K., and Davis, A.A., Appl. Envir. Microbiol., 1993, vol. 59, pp. 1294–1302.

    Google Scholar 

  10. Bahr, M., Hobbie, J.E., and Sogin, M.L., Aquat. Microb. Ecol., 1996, vol. 11, pp. 271–277.

    Google Scholar 

  11. Belkova, N.L., Denisova, L.Ya., Manakova, E.N., et al., Dokl. Akad. Nauk, 1996, vol. 348, pp. 692–695.

    Google Scholar 

  12. Hiorns, W.D., Methe, B.A., Nierzwickibauer, S.A., and Zehr, J.P., Appl. Environ. Microbiol., 1997, vol. 63, pp. 2957–2960.

    Google Scholar 

  13. Zwart, G., Hiorns, W.D., Methe, B.A., et al., System. Appl. Microbiol., 1998, vol. 21, pp. 546–556.

    Google Scholar 

  14. Denisova, L.Ya., Belkova, N.L., Tulokhonov, I.I., and Zaichikov, E.F., Mikrobiologiya, 1999, vol. 68, pp. 547–556.

    Google Scholar 

  15. Semenova, E.A. and Kuznedelov, K.D., Mol. Biol., 1998, vol. 32, pp. 895–901.

    Google Scholar 

  16. Belykh, O.I., Zaika, E.I., and Berezikov, E.V., Sibirskii Ekol. Zh., 1999, vol. 6, pp. 631–637.

    Google Scholar 

  17. Tomioka, N. and Sugiura, M., Mol. Gen. Genet., 1983, vol. 191, pp. 46–50.

    Google Scholar 

  18. Gyllenstein, U., PCR Technology, Principles and Applications for DNA Amplification, Erich, H.A., Ed., N.Y.: M. Stockton Press, 1989, pp. 46–47.

    Google Scholar 

  19. Murray, V., Nucleic Acids Res., 1989, vol. 17, p. 8889.

    Google Scholar 

  20. Altschul, S.F., Gish, W., Miller, W., et al., J. Mol. Biol., 1990, vol. 215, pp. 403–410.

    Google Scholar 

  21. Van de Peer, Y. and DeWachter, R., Comput. Applic. Biosci., 1994, vol. 10, pp. 569–570.

    Google Scholar 

  22. Jukes, T.H. and Cantor, C.R., Mammalian Protein Metabolism, Munro, H.N., Ed., New York: Academic Press, 1969, pp. 21–132.

    Google Scholar 

  23. Saito, U.N. and Nei, M., Mol. Biol. Evol., 1987, vol. 4, pp. 406–425.

    Google Scholar 

  24. Felsenstein, J., Evolution, 1985, vol. 39, pp. 783–791.

    Google Scholar 

  25. Ernst, A., Marshall, P., and Postius, C., FEMS Microbiol. Ecol., 1995, vol. 17, pp. 197–204.

    Google Scholar 

  26. Wilmotte, A., The Molecular Biology of Cyanobacteria, Bryant, D.A., Ed., Dordrecht: Kluwer Acad. Publishers, 1994, pp. 1–25.

    Google Scholar 

  27. Honda, D., Yokota, A., and Sugiyama, J., J. Mol. Evol., 1999, vol. 48, pp. 723–729.

    Google Scholar 

  28. Suzuki, M.T., Rappe, M.S., Hiamberger, Z.W., et al., Appl. Environ. Microbiol., 1997, vol. 63, pp. 983–989.

    Google Scholar 

  29. Antonov, A.S., Bot. Zh., 2000, vol. 85, pp. 3–11.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Semenova, E.A., Kuznedelov, K.D. & Grachev, M.A. Nucleotide Sequences of Fragments of 16S rRNA of the Baikal Natural Populations and Laboratory Cultures of Cyanobacteria. Molecular Biology 35, 405–410 (2001). https://doi.org/10.1023/A:1010482930472

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1010482930472

Navigation