Skip to main content
Log in

Marker-assisted selection of restored male-fertile Brassica napus plants using a set of dominant RAPD markers

  • Published:
Molecular Breeding Aims and scope Submit manuscript

Abstract

Bulked segregant analysis was used to identify RAPD markers in oilseed rape (Brassica napus L.) that were linked to a male fertility restorer gene for Ogura cytoplasmic male sterility. After screening for polymorphisms using 960 primers, 14 RAPD markers were mapped to a 25 cM region including the restorer locus, a mapping population of 242 F2 individuals being employed. The map was used to select 11 markers that were investigated for polymorphisms between the restorer donor line and 46 recipient lines. A set of four RAPD markers, one in coupling phase with the restorer allele and three with the non-restorer allele, which were informative in all 46 combinations, were used in marker assisted selection of plants homozygous for the restorer allele. A total of 906 homozygous restored plants were found among the 4605 BC1F2 plants analysed. Phenotypic data of a subset of the classified plants was compared with the RAPD data and the expected number of recombinants was calculated from the map data. A close correspondence between the expected and observed numbers of plants with a deviating phenotype was found. Thus, use of a set of dominant RAPD markers provides a way obtaining reliable data for marker-assisted selection.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Ayliffe AM, Lawrence GJ, Ellis JG, Pryor AJ: Heteroduplex molecules formed between allelic sequences cause nonparental RAPD bands. Nucl Acids Res 22: 1632–1636 (1994).

    Google Scholar 

  2. Delourme R, Bouchereau A, Hubert N, Renard M, Landry BS: Identification of RAPD markers linked to a fertility restorer gene for the Ogura radish cytoplasmic male sterility of rapeseed (Brassica napus L.). Theor Appl Genet 88: 741–748 (1994).

    Google Scholar 

  3. Edwards MD, Page NJ: Evaluation of marker-assisted selection through computer simulation. Theor Appl Genet 88: 376–382 (1994).

    Google Scholar 

  4. Haley SD, Afanador L, Kelly JD: Selection for monogenic pest resistance traits with coupling-and repulsion-phase RAPD markers. Crop Sci 34: 1061–1066 (1994).

    Google Scholar 

  5. Halldén C, Nilsson N-O, Hjerdin A, Rading IM: A gel electrophoresis system adapted for large-scale molecular marker analysis. Anal Biochem 242: 145–147 (1996).

    Google Scholar 

  6. Haldén C, Hansen M, Nilsson N-O, Hjerdin A, Säll T: Competition as a source of errors in RAPD analysis. Theor Appl Genet 93: 1185–1192 (1996).

    Google Scholar 

  7. Hjerdin A, Säll T, Tuvesson S, Halldén C: RFLP markers in the genus Beta: characterization of DNA sequences from a Beta vulgaris library. Genetica 92: 91–99 (1994).

    Google Scholar 

  8. Hospital F, Chevalet C, Mulsant P: Using markers in gene introgression breeding programmes. Genetics 132: 1199–1210 (1992).

    Google Scholar 

  9. Johnson E, Miklas PN, Stavely JR, Martinez-Cruzado JC: Coupling-and repulsion phase RAPDs for marker-assisted selection of PI 181996 rust resistance in common bean. Theor Appl Genet 90: 659–664 (1995).

    Google Scholar 

  10. Kosambi DD: The estimation of map distances from recombination values. Ann Eugen 12: 172–175 (1944).

    Google Scholar 

  11. Michelmore RW, Paran I, Kesseli RV: Identification of markers linked to disease resistance genes by bulked segregant analysis: A rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci 88: 9828–9832 (1991).

    Google Scholar 

  12. Miklas PN, Afanador L, Kelly JD: Recombination-facilitated RAPD marker-assisted selection for disease resistance in common bean. Crop Sci 36: 86–90 (1996).

    Google Scholar 

  13. Nilsson NO, Halldén C, Hansen M, Hjerdin A, Säll T: Comparing the distribution of RAPD and RFLP markers in a high density linkage map of sugar beet. Genome, in press (1997).

  14. Ohmori T, Murata M, Motoyoshi: Molecular characterization of RAPD and SCAR markers linked to the Tm-1 locus in tomato. Theor Appl Genet 92: 151–156 (1996).

    Google Scholar 

  15. Paran I, Michelmore RW: Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theor Appl Genet 85: 985–993 (1993).

    Google Scholar 

  16. Penner GA, Bush A, Wise R, Kim W, Domier L, Kasha K, Laroche A, Scoles G, Molnar SJ, Fedak G: Reproducibility of random amplified polymorphic DNA (RAPD) analysis among laboratories. PCR Meth Appl 2: 341–345 (1993).

    Google Scholar 

  17. Rafalski JA, Tingey SV: Genetic diagnostics in plant breeding: RAPDs, microsatellites and machines. Trends Genet 9: 275–280 (1993).

    Google Scholar 

  18. Reiter RS, Williams JGK, Feldmann KA, Rafalski JA, Tingey SV, Scolnik PA: Global and local genome mapping in Arabidopsis thaliana by using recombinant inbred lines and random amplified polymorphic DNAs. Proc Natl Acad Sci USA 89: 1477–1481 (1992).

    Google Scholar 

  19. Stam P: Construction of integrated genetic linkage maps by means of a new computer package, JOINMAP. Plant J 3: 739–744 (1993).

    Google Scholar 

  20. Weeden NF, Timmerman GM, Hemmat M, Kneen BE, Lodhi MA: Inheritance and reliability of RAPDmarkers. In: Hoisington D, McNab A (eds) Proceedings of the Symposium Applied RAPD Technology Plant Breeding, Minneapolis, pp. 12–17 (1992).

  21. Welsh J, McClelland M: Fingerprinting genomes using PCR with arbitrary primers. Nucl Acids Res 18: 7213–7218 (1990).

    Google Scholar 

  22. Williams JGK, Kubelik AR, Livak KL, Rafalski JA, Tingey SV: DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucl Acids Res 18: 6531–6535 (1990).

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hansen, M., Halldén, C., Nilsson, NO. et al. Marker-assisted selection of restored male-fertile Brassica napus plants using a set of dominant RAPD markers. Molecular Breeding 3, 449–456 (1997). https://doi.org/10.1023/A:1009647417936

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1009647417936

Navigation