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Screening of cDNA Clones for Plastid-targeted Proteins

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Abstract

We present a method to isolate cDNA clones that encode plastid-targeted proteins other than those encoding proteins of photosynthetic machinery. As an example, we have isolated clones for dark-inducible chloroplast proteins. Poly(A)+ RNA was isolated from 15-day-old radish cotyledons that had been kept in darkness for 24 h, and was used to prepare a library with the plasmid vector pBluescript. It was divided into groups of 8 or 12 clones, which were separately expressed in vitro in the presence of [35S]methionine. The labeled polypeptides were then incubated with isolated chloroplasts to see if they are imported by the chloroplasts. The group that showed positive signals after SDS-PAGE of the lysed chloroplasts were further analyzed for individual clones in the same manner. Thus, we were successful in isolating cDNA clones encoding chloroplast-targeted proteins that were expressed in radish cotyledons specifically in the dark. The method can be used to identify nuclear genes for nonphotosynthetic plastids, if an appropriate cDNA library is available.

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References

  • Azumi Y and Watanabe A (1991) Evidence for a senescence-associated gene induced by darkness. Plant Physiol 95: 577–583.

    Google Scholar 

  • Buluwela L, Forster A, Boehm T and Rabbitts TH (1989) A rapid procedure for colony screening using nylon filters. Nucl Acids Res 17: 452.

    Google Scholar 

  • Inoue H, Nojima H and Okayama H (1990) High efficiency transformation of Esherichia coli with plasmids. Gene 96: 23–28.

    Google Scholar 

  • Kawakami N and Watanabe A (1988) Change in gene expression in radish cotyledons during dark-induced senescence. Plant Cell Physiol 29: 33–42.

    Google Scholar 

  • Kawakami N and Watanabe A (1993) Translatable mRNAs for chloroplast-targeted proteins in detached radish cotyledons during senescence in darkness. Plant Cell Physiol 34: 697–704.

    Google Scholar 

  • Keegstra K and Olsen LJ (1989) Chloroplastic precursors and their transport across the envelope membranes. Annu Rev Plant Physiol 40: 471–501.

    Google Scholar 

  • Konishi T and Watanabe A (1993) Transport of proteins into the thylakoid lumen-Stromal processing and energy requirements for the import of the precursor to the 22-kDa protein of PSII. Plant Cell Physiol 34: 315–319.

    Google Scholar 

  • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685.

    Google Scholar 

  • Oh SA, Lee SY, Chung IK, Lee C-H and Nam HG (1996) A senescence-associated gene of Arabidopsis thaliana is distinctively regulated during natural and artificially induced leaf senescence. Plant Mol Biol 30: 739–754.

    Google Scholar 

  • Ohyama K et al. (1986) Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322: 572–574.

    Google Scholar 

  • Reddy ASN and Poovaiah BW (1990) Molecular cloning and sequencing of a cDNA for an auxin-repressed mRNA: correlation between fruit growth and repression of the auxinregulated gene. Plant Mol Biol 14: 127–136.

    Google Scholar 

  • Sambrook J, Fritsch EF and Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, NY.

    Google Scholar 

  • Shimada Y, Wu G-J and Watanabe A (1998) A protein encoded by din1, a dark-inducible and senescence-associated gene of radish, can be imported by isolated chloroplasts and has sequence similarity to sulfide dehydrogenase and other small stress proteins. Plant Cell Physiol 39(2): 139–143.

    Google Scholar 

  • Shinozaki K et al. (1986) The complete nucleotide sequence of tobacco chloroplast genome: its gene organization and expression. EMBO J 5: 2043–2049.

    Google Scholar 

  • Sive HL and John TS (1988) A simple subtractive hybridization technique employing photoactivatable biotin and phenol extraction. Nucl Acids Res 16: 10937.

    Google Scholar 

  • Takabe T, Nishimura M, and Akazawa T (1979) Isolation of intact chloroplasts from spinach leaf by centrifugation in gradients of the modified silica. Agric Biol Chem 43: 2137–2142.

    Google Scholar 

  • Zozulya SA, Gurevich VV, Zvyaga TA, Shirokova EP, Dumler I.L, Garnovskaya MN, Natochin MY, Shmukler BE and Badalov PR (1990) Functional expression in vitro of bovine visual rhodopsin. Protein Engineering 3: 453–458.

    Google Scholar 

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Shimada, Y., Wu, GJ. & Watanabe, A. Screening of cDNA Clones for Plastid-targeted Proteins. Plant Molecular Biology Reporter 16, 199 (1998). https://doi.org/10.1023/A:1007494221207

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