Abstract
Chlorella protothecoides cultures grown in a nitrogen-free bleaching medium (BM−N) in the dark rapidly degraded chlorophyll (Chl) to red catabolites. This degreening process was investigated under different growth conditions. Supply of nitrogen to the culture medium (BM+N) inhibited bleaching and the synthesis of catabolites as did the addition to BM−N of cycloheximide or a chelator, 2,2′-bipyridyl. In contrast, chloramphenicol or the protease inhibitor E64 had no effect. During bleaching, Chl breakdown was accompanied by the degradation of cellular proteins such as light-harvesting complex II, cytochrome f and protochlorophyllide oxido-reductase. During growth in BM–N, protease activity increased and proteins immunologically detectable with an antibody against a senescence-enhanced cysteine protease accumulated. cDNAs from BM−N and BM+N cells were used for differential and subtractive screening to isolate cDNAs representing genes with degreening-enhanced expression (dee) in C. protothecoides. Several different dees were identified with different patterns of expression during Chlorella growth but which were all expressed at higher levels during bleaching. Among these, dee4 was most abundant and its expression was exclusive in BM–N cultures. Analysis of the dee sequences showed that they encode different proteins including a novel amino acid carrier (dee4), ferritin, ATP-dependent citrate lyase, a Ca2+-binding protein, MO25, ubiquinone-cytochrome c-reductase and several new proteins.
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Arnon, D.I. 1938. Microelements in culture-solution experiments with higher plants. Am. J. Bot. 25: 322–325.
Bachmann, A., Fernández-Ló pez, J., Ginsburg, S., Thomas, H., Bouwcamp, J.C., Solomos, T. and Matile, P. 1994. Stay-green genotypes of Phaseolus vulgaris L.: chloroplast proteins and chlorophyll catabolites during foliar senescence. New Phytol. 126: 593–600.
Bradford, M.M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72: 248–254.
Brown, S.B., Houghton, J.D. and Hendry, G.A.F. 1991. Chlorophyll breakdown. In: H. Scheer (Ed.), Chlorophylls, CRC Press, Boca Raton, FL, pp. 465-489.
Buchanan-Wollaston, V. 1997. The molecular biology of leaf senescence. J. Exp. Bot. 48: 181–199.
Buchanan-Wollaston, V. and Ainsworth, C. 1997. Leaf senescence in Brassica napus: cloning of senescence-related genes by subtractive hybridization. Plant Mol. Biol. 33: 821–834.
Chen, L. and Bush, D.R. 1997. LHT1, a lysine and histidine-specific amino acid transporter in Arabidopsis. Plant Physiol. 115: 1127–1134.
Curty, C. and Engel, N. 1996. Detection, isolation and structure elucidation of a chlorophyll a catabolite from autumnal senescent leaves of Cercidiphyllum japonicum. Phytochemistry 42: 1531–1536.
Curty, C., Engel, N. and Gossauer, A. 1995. Evidence for a monooxygenase-catalyzed primary process in the catabolism of chlorophyll. FEBS Lett. 364: 41–44.
Davies, T.G.E., Rogers, L.J. and Thomas, H. 1989. Purification and antigenicity of cytochrome f from meadow fescue, Festuca pratensis Huds., and cross-reactivity of the antibodies with the protein from other plant species. Plant Physiol. Biochem. 27: 889–898.
de Vries, S.C., Springer, J. and Wessels, J.G.H. 1982. Diversity of abundant mRNA sequences and patterns of protein synthesis in etiolated and greened pea seedlings. Planta 156: 129–135.
Engel, N., Jenny, T.A., Mooser, V. and Gossauer, A. 1991. Chlorophyll catabolism in Chlorella protothecoides. Isolation and structure elucidation of a red bilin derivative. FEBS Lett. 293: 131–133.
Engel, N., Curty, C. and Gossauer, A. 1996. Chlorophyll catabolism in Chlorella protothecoides. 8. Facts and artefacts. Plant Physiol. Biochem. 34: 77–83.
Fischer, W.N., Kwart, M., Hummel, S. and Frommer, W. 1995. Substrate specificity and expression profile of amino acid transporters (AAPs) in Arabidopsis. J. Biol. Chem. 270: 16315–16320.
Fukuda, H. 1996. Xylogenesis: initiation, progression, and cell death. Annu. Rev. Plant Physiol. Plant Mol. Biol. 47: 299–325.
Hanfrey, C., Fife, M. and Buchanan-Wollaston, V. 1996. Leaf senescence in Brassica napus: expression of genes encoding pathogenesis-related proteins. Plant Mol. Biol. 30: 597–609.
Heaton, J.W. and Marangoni, A.G. 1996. Chlorophyll degradation in processed foods and senescent plant tissues. Trends Food Sci. Technol. 7: 8–15.
Hendry, G.A.F., Houghton, J.D. and Brown, S.B. 1987. Chlorophyll degradation. A biological enigma. New Phytol. 107: 255–302.
Hilditch, P. 1986. Immunological quantification of the chlorophyll a/b binding protein in senescing leaves of Festuca pratensis Huds. Plant Sci. 45: 95–99.
Hilditch, P.I., Thomas, H., Thomas, B.J. and Rogers, L.J. 1989. Leaf senescence in a non-yellowing mutant of Festuca pratensis: proteins of photosystem II. Planta 177: 265–272.
Hörtensteiner, S., Vicentini, F. and Matile, P. 1995. Chlorophyll breakdown in senescent cotyledons of rape, Brassica napus L.: enzymatic cleavage of phaeophorbide a in vitro. New Phytol. 129: 237–246.
Hörtensteiner, S., Wüthrich, K.L., Matile, P., Ongania, K.-H. and Kräutler, B. 1998. The key step in chlorophyll breakdown in higher plants. Cleavage of pheophorbide a macrocycle by a monooxygenase. J. Biol. Chem. 273: 15335–15339.
Hsu, L.-C., Chiou, T.-J., Chen, L. and Bush, D.R. 1993. Cloning a plant amino acid transporter by functional complementation of a yeast amino acid transport mutant. Proc. Natl. Acad. Sci. USA 90: 7441–7445.
Iturraspe, J., Engel, N. and Gossauer, A. 1994. Chlorophyll catabolism. Isolation and structure elucidation of chlorophyll b catabolites in Chlorella protothecoides. Phytochemistry 35: 1387–1390.
Iturraspe, J., Moyano, N. and Frydman, B. 1995. A new 5-formylbilinone as the major chlorophyll a catabolite in tree senescent leaves. J. Org. Chem. 60: 6664–6665.
Kaneko, T., Tanaka, A., Sato, S., Kotani, H., Sazuka, T., Miyajima, N., Sugiura, M. and Tabata, S. 1995. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome. DNA Res. 2: 153–166.
Kräutler, B., Jaun, B., Bortlik, K.-H., Schellenberg, M. and Matile, P. 1991. On the enigma of chlorophyll degradation: the constitution of a secoporphinoid catabolite. Angew. Chem. Int. Ed. Engl. 30: 1315–1318.
Kwart, M., Hirner, B., Hummel, S. and Frommer, W.B. 1993. Differential expression of two related amino acid transporters with differing substrate specificity in Arabidopsis thaliana. Plant J. 4: 993–1002.
Langmeier, M., Ginsburg, S. and Matile, P. 1993. Chlorophyll breakdown in senescent leaves: demonstration of Mgdechelatase activity. Physiol. Plant. 89: 347–353.
Lichtenthaler, H.K. 1987. Chlorophylls and carotenoids: pigments of photosynthetic biomembranes. Meth. Enzymol. 148: 350–382.
Lisitsyn, N., Lisitsyn, N. and Wigler, M. 1993. Cloning the differences between two complex genomes. Science 259: 946–951.
Matile, P. 1992. Chloroplast senescence. In: N.R. Baker and H. Thomas (Eds.), Crop Photosynthesis: Spatial and Temporal Determinants, Elsevier Science Publishers, Amsterdam, pp. 413–440.
Matile, P. 1997. The vacuole and cell senescence. In: J.A. Callow (Ed.), Advances in Botanical Research: Incorporating Advances in Plant Pathology, Academic Press, New York, pp. 87–112.
Matile, P. and Schellenberg, M. 1996. The cleavage of pheophorbide a is located in the envelope of barley gerontoplasts. Plant Physiol. Biochem. 34: 55–59.
Matile, P., Hörtensteiner, S., Thomas, H. and Kräutler, B. 1996. Chlorophyll breakdown in senescent leaves. Plant Physiol. 112: 1403–1409.
Matile, P., Hörtensteiner, S. and Thomas, H. 1999. Chlorophyll degradation. Annu. Rev. Plant Physiol. Plant Mol. Biol. 50: 67–95.
Miyamoto, H., Matsushiro, A. and Nozaki, M. 1993. Molecular cloning of a novel mRNA sequence expressed in cleavage stage mouse embryos. Mol. Reprod. Dev. 34: 1–7.
Mühlecker, W., Kräutler, B., Ginsburg, S. and Matile, P. 1993. Breakdown of chlorophyll: the constitution of a secoporphinoid chlorophyll catabolite from senescent rape leaves. Helv. Chim. Acta 76: 2976–2980.
Mühlecker, W. and Kräutler, B. 1996. Breakdown of chlorophyll: constitution of nonfluorescing chlorophyll-catabolites from senescent cotyledons of the dicot rape. Plant Physiol. Biochem. 34: 61–75.
Nicholas, K.B., Nicholas, H.B. and Deerfield, D.W. 1997. Gene-Doc: analysis and visualization of genetic variation. EMBNEW News 4: 14.
Oshio, Y. and Hase, E. 1969. Studies on red pigments excreted by cells of Chlorella protothecoides during the process of bleaching induced by glucose or acetate. I. Chemical properties of the red pigments. Plant Cell Physiol. 10: 41–49.
Oshio, Y. and Hase, E. 1972. Changes in ribulose 1,5-diphosphate carboxylase level during processes of degeneration and regeneration of chloroplasts in Chlorella protothecoides. Plant Cell Physiol. 13: 955–963.
Rodoni, S., Mühlecker, W., Anderl, M., Kräutler, B., Moser, D., Thomas, H., Matile, P. and Hörtensteiner, S. 1997. Chlorophyll breakdown in senescent chloroplasts. Cleavage of pheophorbide a in two enzymic steps. Plant Physiol. 115: 669–676.
Sambrook, J., Fritsch, E.F. and Maniatis, T. 1989. Molecular Cloning: A Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
Sanger, F., Nicklen, S. and Coulson, A.R. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74: 5463–5467.
Schellenberg, M., Matile, P. and Thomas, H. 1993. Production of a presumptive chlorophyll catabolite in vitro: requirement for reduced ferredoxin. Planta 191: 417–420.
Scheumann, V., Schoch, S. and Rüdiger, W. 1999. Chlorophyll b reduction during senescence of barley seedlings. Planta 209: 364–370.
Schünmann, P.H.D., Ougham, H.J. and Turk, K.S. 1994. Leaf extension in the slender barley mutant: delineation of the zone of cell expansion and changes in translatable mRNA during leaf development. Plant Cell Envir. 17: 1315–1322.
Seymour, G.B., Thompson, A.K. and John, P. 1987. Inhibition of degreening in the peel of bananas ripened at tropical temperatures. I. Effect of high temperature on changes in the pulp and peel during ripening. Ann. Appl. Biol. 110: 145–151.
Shihira-Ishikawa, I. and Hase, E. 1964. Nutritional control of cell pigmentation in Chlorella protothecoides with special reference to the degeneration of chloroplast induced by glucose. Plant Cell Physiol. 5: 227–240.
Smart, C.M., Hosken, S.E., Thomas, H., Greaves, J.A., Blair, B.G. and Schuch, W. 1995. The timing of maize leaf senescence and characterisation of senescence-related cDNAs. Physiol. Plant. 93: 673–682.
Sperling, U., van Cleve, B., Frick, G., Apel, K. and Armstrong, G. 1997. Overexpression of light-dependent PORA or PORB in plants depleted of endogenous POR by far-red light enhances seedling survival in white light and protects against photooxidative damage. Plant J. 12: 649–658.
Tenhunen, R., Marver, H.S. and Schmid, R. 1969. Microsomal heme oxygenase. Characterization of the enzyme. J. Biol. Chem. 244: 6388–6394.
Thomas, H. and Stoddart, J.L. 1980. Leaf senescence. Annu. Rev. Plant Physiol. 31: 83–111.
Thomas, H., Bortlik, K.-H., Rentsch, D., Schellenberg, M. and Matile, P. 1989. Catabolism of chlorophyll in vivo: significance of polar chlorophyll catabolites in a non-yellowing senescence mutant of Festuca pratensis Huds. New Phytol. 111: 3–8.
Thomas, H., Evans, C., Thomas, H.M., Humphreys, M.W., Morgan, G., Hauck, B. and Donnison, I. 1997. Introgression, tagging and expression of a leaf senescence gene in Festulolium. New Phytol. 137: 29–34.
Vicentini, F., Hörtensteiner, S., Schellenberg, M., Thomas, H. and Matile, P. 1995. Chlorophyll breakdown in senescent leaves: identification of the biochemical lesion in a stay-green genotype of Festuca pratensis Huds. New Phytol. 129: 247–252.
von Wettstein, D., Gough, S. and Kannangara, C.G. 1995. Chlorophyll biosynthesis. Plant Cell 7: 1039–1057.
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Hörtensteiner, S., Chinner, J., Matile, P. et al. Chlorophyll breakdown in Chlorella protothecoides: characterization of degreening and cloning of degreening-related genes. Plant Mol Biol 42, 439–450 (2000). https://doi.org/10.1023/A:1006380125438
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DOI: https://doi.org/10.1023/A:1006380125438