Skip to main content
Log in

A Brassica cDNA clone encoding a bifunctional hydroxymethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase involved in thiamin biosynthesis

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

We report the characterization of a Brassica napus cDNA clone (pBTH1) encoding a protein (BTH1) with two enzymatic activities in the thiamin biosynthetic pathway, thiamin-phosphate pyrophosphorylase (TMP-PPase) and 2-methyl-4-amino-5-hydroxymethylpyrimidine-monophosphate kinase (HMP-P kinase). The cDNA clone was isolated by a novel functional complementation strategy employing an Escherichia coli mutant deficient in the TMP-PPase activity. A biochemical assay showed the clone to confer recovery of TMP-PPase activity in the E. coli mutant strain. The cDNA clone is 1746 bp long and contains an open reading frame encoding a peptide of 524 amino acids. The C-terminal part of BTH1 showed 53% and 59% sequence similarity to the N-terminal TMP-PPase region of the bifunctional yeast proteins Saccharomyces THI6 and Schizosaccharomyces pombe THI4, respectively. The N-terminal part of BTH1 showed 58% sequence similarity to HMP-P kinase of Salmonella typhimurium. The cDNA clone functionally complemented the S. typhimurium and E. coli thiD mutants deficient in the HMP-P kinase activity. These results show that the clone encodes a bifunctional protein with TMP-PPase at the C-terminus and HMP-P kinase at the N-terminus. This is in contrast to the yeast bifunctional proteins that encode TMP-PPase at the N-terminus and 4-methyl-5-(2-hydroxyethyl)thiazole kinase at the C-terminus. Expression of the BTH1 gene is negatively regulated by thiamin, as in the cases for the thiamin biosynthetic genes of microorganisms. This is the first report of a plant thiamin biosynthetic gene on which a specific biochemical activity is assigned. The Brassica BTH1 gene may correspond to the Arabidopsis TH-1 gene.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ: Basic local alignment search tool. J Mol Biol 215: 403–410 (1990).

    Article  PubMed  Google Scholar 

  2. Begley TP: The biosynthesis and degradation of thiamin (vitamin B1). Nat Prod Rep 3: 177–185 (1996).

    Google Scholar 

  3. Belanger FC, Leustek T, Chu B, Kriz A: Evidence for the thiamine biosynthetic pathway in higher-plant plastids and its developmental regulation. Plant Mol Biol 29: 809–821 (1995).

    PubMed  Google Scholar 

  4. Bennett M, Cullimore J: Expression of three plant glutamine synthetase cDNAs in Escherichia coli. Formation of catalytically active isoenzymes, and complementation of a glnA mutant. Eur J Biochem 193: 319–324 (1990).

    PubMed  Google Scholar 

  5. Baldet P, Ruffet ML: Biotin synthesis in higher plants: Isolation of a cDNA encoding Arabidopsis thaliana bioB-gene product equivalent by functional complementation of a biotin auxotroph mutant bioB105 of Escherichia coli K12. C R Acad Sci III 319: 99–106 (1996).

    PubMed  Google Scholar 

  6. Boynton JE: Chlorophyll-deficient mutants in tomato requiring vitamin B1. I. Genetics and physiology. Hereditas 56: 171–199 (1966).

    Google Scholar 

  7. Choi SD, Creelman R, Mullet J, Wing RA: Construction and characterization of a bacterial artificial chromosome library from Arabidopsis thaliana. Weeds World 2: 17–20 (1995).

    Google Scholar 

  8. Elcock AH, Potter MJ, Matthews DA, Knighton DR, McCammon JA: Electrostatic channeling in the bifunctional enzyme dihydrofolate reductase-thymidylate synthase. J Mol Biol 262: 370–374 (1996).

    PubMed  Google Scholar 

  9. Hoffman CS, Winston F: A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57: 267–272 (1987).

    Article  PubMed  Google Scholar 

  10. Howarth JR, Roberts MA, Wray JL: Cysteine biosynthesis in higher plants: a new member of the Arabidopsis thaliana serine acetyltransferase small gene-family obtained by functional complementation of an Escherichia coli cysteine auxotroph. Biochim Biophys Acta 1350: 123–127 (1997).

    PubMed  Google Scholar 

  11. Imamura N, Nakayama H: thiK and thiL loci of Escherichia coli. J Bact 151: 708–717 (1982).

    PubMed  Google Scholar 

  12. Joshi CP: An inspection of the domain between putative TATA box and translation start site in 79 plant genes. Nucl Acid Res 15: 6643–6653 (1987).

    Google Scholar 

  13. Julliard J, Douce R: Biosynthesis of the thiazole moiety of thiamin (vitamin B1) in higher plant chloroplasts. Proc Natl Acad Sci USA 88: 2042–2045 (1991).

    Google Scholar 

  14. Kawasaki T, Nakata T, Nose Y: Genetic mapping with a thiamine-requiring auxotroph of Escherichia coli K-12 defective in thiamine phosphate pyrophosphorylase. J Bact 95: 1483–1485 (1968).

    PubMed  Google Scholar 

  15. Kawasaki Y: Copurification of hydroxyethylthiazole kinase and thiamine-phosphate pyrophosphorylase of Saccharomyces cerevisiae: characterization of hydorxyethylthiazole kinase as a bifunctional enzyme in the thiamine biosynthetic pathway. J Bact 175: 5153–5158 (1993).

    PubMed  Google Scholar 

  16. Kawasaki Y, Nosaka K, Kaneko Y, Nishimura H, Iwashima A: Regulation of thiamine biosynthesis in Saccharomyces cerevisiae. J Bact 172: 6145–6147 (1990).

    PubMed  Google Scholar 

  17. Knighton DR, Kan CC, Howland E, Janson CA, Hostomska Z, Welsh KM, Matthews DA: Structure of and kinetic channeling in bifunctional dihydrofolate reductase-thymidylate synthase. Nat Struct Biol 1: 186–194 (1994).

    PubMed  Google Scholar 

  18. Komeda Y, Tanaka M, Mishimune T: A th-1 mutant of Arabidopsis Thaliana is defective for a thiamin-phosphatesynthesizing enzyme: Thiamin phosphate pyrophosphorylase. Plant Physiol 88: 248–250 (1988).

    Google Scholar 

  19. Kumar S, Sharma SB: Mutations in three of the genes determining thiamine biosynthesis in Pisum sativum. Mol Gen Genet 204: 473–476 (1986).

    Google Scholar 

  20. Kwak JM, Kim SA, Lee SK, Oh SA, Byoun CH, Han JK, Nam HG: Insulin-induced maturation of Xenopus oocytes is inhibited by microinjection of a Brassica napus cDNA clone with high similarity to a mammalian receptor for activated protein kinase. Planta 202: 9–17 (1997).

    Article  PubMed  Google Scholar 

  21. Lazar G, Zhang H, Goodmann HM: The origin of the bifunctional dihydrofolate reductase-thymidylate synthase isogenes of Arabidopsis thaliana. Plant J 3: 657–668 (1993).

    PubMed  Google Scholar 

  22. Lijsebettens MV, Vanderhaeghen R, Block MD, Bauw G, Villarroel R, Montagu MV: An S18 ribosomal protein gene copy at the Arabidopsis PFL locus affects plant development by its specific expression in meristems. EMBO J 13: 3378–3388 (1994).

    PubMed  Google Scholar 

  23. Li SL, Redei GP: Thiamine mutants of the crucifer, Arabidopsis. Biochem Genet 3: 163–170 (1969).

    PubMed  Google Scholar 

  24. Machado CR, Coasta de Oliveira RL, Boiteux S, Praekelt UM, Meacock PA, Menck CFM: Thi1, a thiamine biosynthetic gene in Arabidopsis thaliana, complements bacterial defects in DNA repair. Plant Mol Biol 31: 585–593 (1996).

    PubMed  Google Scholar 

  25. Mitsuda H, Tanaka T, Kawai F: Biosynthesis of thiamine in plants. I. Enzymatic formation of thiamine from pyrimidine and thiazole moieties. J Vitaminol 16: 263–267 (1970).

    Google Scholar 

  26. Mitsuda H, Tanaka T, Takii Y, Kawai F: Biosynthesis of thiamine in plants. II. Biosynthetic pathway of thiamine monophosphate from pyrimidine and thiazole moieties. J Vitaminol 17: 89–95 (1971).

    Google Scholar 

  27. Mozafar A, Oertli JJ: Thiamin (vitamin B1): translocation and metabolism by soybean seedling. J Plant Physiol 142: 438–445 (1993).

    Google Scholar 

  28. Nakayama H, Hayashi R: Biosynthetic pathway of thiamine pyrophosphate: a special reference to the thiamine monophosphate-requiring mutant and the thiamine pyrophosphate-requiring mutant of Escherichia coli. J Bacteriol 112: 1118–1126 (1972).

    PubMed  Google Scholar 

  29. Nosaka K, Nishimura H, Kawasaki Y, Takashi T, Iwashima A: Isolation and charaterizatin of the THI6 gene encoding a bifunctional thiamin-phosphate pyrophosphorylase/ hydroxyethylthiazole kinase from Saccharomyces cerevisiae. J Biol Chem 269: 30510–30516 (1994).

    PubMed  Google Scholar 

  30. Oh SA, Lee SY, Chung IK, Lee CH, Nam HG: A senescenceassociated gene of Arabidopsis thaliana is distinctively regulated during natural and artificially induced leaf senescence. Plant Mol Biol 30: 739–754 (1996).

    PubMed  Google Scholar 

  31. Park YS, Song OK, Kwak JM, Hong SW, Lee HH, Nam HG: Functional complementation of a yeast vesicular transport mutation ypt1–1 by a Brassica napus cDNA clone encoding a small GTP-binding protein. Plant Mol Biol 26: 1725–1735 (1994).

    PubMed  Google Scholar 

  32. Petersen LA, Downs DM: Identification and characterization of an operon in Salmonella typhimurium involved in thiamine biosynthesis. J Bact 179: 4894–4900 (1997).

    PubMed  Google Scholar 

  33. Praekelt UM, Byrne KL, Meacock PA: Regulation of THI4 (MOL1), a thiamine-biosynthetic gene of Saccharomyces cerevisiae. Yeast 10: 481–490 (1994).

    PubMed  Google Scholar 

  34. Proebsting WM, Maggard SP, Guo WW: The relationship of thiamine to the Alt locus of Pisum sativum L. J Plant Physiol 136: 231–235 (1990).

    Google Scholar 

  35. Proudfoot NJ, Brownlee GG: 30 non-coding region sequences in eukaryotic messenger RNA. Nature 263: 211–214 (1976).

    PubMed  Google Scholar 

  36. Ravanel S, Ruffet ML, Douce R: Cloning of an Arabidopsis thaliana cDNA encoding cystathionine α-lyase by functional complementation in Escherichia coli. Plant Mol Biol 29: 875–882 (1995).

    PubMed  Google Scholar 

  37. Ribeiro A, Praekelt U, Akkermans AD, Meacock PA, van Kammen A, Bisseling T, Pawlowski K: Identification of AGTH1, whose product is involved in biosynthesis of the thiamine precursor thiazole, in actinorhizal nodules of Alnus glutinosa. Plant J 10: 361–368 (1996).

    PubMed  Google Scholar 

  38. Rigby DJ, Radford A: Investigation of binding sites in the complex pyrimidine-specific carbamoyl-phosphate synthetase/ aspartate carbamoyltransferase enzyme of Neurospora crassa. Biochim Biophys Acta 709: 154–159 (1982).

    PubMed  Google Scholar 

  39. Riley JR, Butler D, Ogilvie R, Finniear D, Jenner S, Power R, Anand JC, Markham, AF: A novel, rapid method for the isolation of terminal sequences from yeast artificial chromosomes. Nucl Acids Res 18: 2887–2890 (1990).

    PubMed  Google Scholar 

  40. Thompson JD, Higgins DG, Gibson TJ: CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucl Acids Res 22: 4673–4680 (1994).

    PubMed  Google Scholar 

  41. Vander Horn PB, Backstrom AD, Stewart V, Begley TP: Structural genes for thiamine biosynthetic enzymes (thiCEFGH) in Escherichia coli K-12. J Bact 175: 982–992 (1993).

    PubMed  Google Scholar 

  42. Wallace TP, Howe CJ: Plant organellar targeting sequences. In: Croy RRD (ed) Plant Molecular Biology Labfax, pp. 287–292. Bios Scientific Publishers, Oxford (1993).

    Google Scholar 

  43. Webb E, Claas K, and Downs DM: Characterization of thiI, a new gene involved in thiazole biosynthesis in Salmonella typhimurium. J Bact 179: 4399–4402 (1997).

    PubMed  Google Scholar 

  44. Webb E, Downs DM: Characterization of thiL, encoding thiamin-monophosphate kinase in Salmonella typhimurium. J Biol Chem 272: 15702–15707 (1997).

    PubMed  Google Scholar 

  45. Webb E, Febres F, Downs DM: Thiamin pyrophosphate (TPP) negatively regulates transcription of some thi genes of Salmonella typhimurium. J Bact 178: 2533–2538 (1996).

    PubMed  Google Scholar 

  46. Zurlinden A, Schweingruber ME: Cloning, nucleotide sequence, and regulation of Schizosaccharomyces pombe thi4, a thiamine biosynthetic gene. J Bact 176: 6631–6635 (1994).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Suk Kim, Y., Nosaka, K., Downs, D.M. et al. A Brassica cDNA clone encoding a bifunctional hydroxymethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase involved in thiamin biosynthesis. Plant Mol Biol 37, 955–966 (1998). https://doi.org/10.1023/A:1006030617502

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1006030617502

Navigation