Abstract
A rapid and sensitive non-radioactive Northern blot protocol is described which has been optimised in several critical steps. This is based on a formaldehyde-denaturing agarose gel electrophoresis, an alkaline transfer, hybridisation with digoxigenin-DNA probes and detection with a chemiluminescent substrate. This method allows even low abundance mRNAs to be detected in total RNA samples from mammalian tissues.
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Alonso S,Minty A,Bourlet Y,Buckingham M (1986) Comparison of the three actin-coding sequences in the mouse; evolutionary relationships between the actin genes of warm-blooded vertebrates. J. Mol. Evol. 23: 11-22.
Ausubel FM,Brent R,Kingston RE,Moore DD,Seidman JG,Smith JA,Struhl K (1987) Current Protocols in Molecular Biology. New York: John Wiley & Sons, Inc.
Baik M,Choi CB,Keller WL,Park CS (1992) Developmental stages and energy restriction affect cellular oncogene expression in tissues of female rats. J. Nutr. 122: 1614-1620.
Boehringer Mannheim Gmb H, Biochemica (1995) The DIG System User's Guide for Filter Hybridization. Germany.
Chomczynski P,Sacchi N (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162: 156-159.
Dhar R,Ellis RW,Oroszlan B,Maizel J,Lowy D,Scolnick E (1982) Nucleotide sequence of the p21 transforming protein of Harvey murine sarcoma virus. Science 217: 934-937.
Engler-Blum G,Meier M,Frank J,Müller GA (1993) Reduction of background problems in nonradioactive Northern and Southern blot analyses enables higher sensitivity than 32P-based hybridizations. Anal. Biochem. 210: 235-244.
Kricka LJ (1995) Nonisotopic Probing, Blotting and Sequencing, 2nd edn. San Diego: Academic Press.
Löw R (1998) Nonradiactive Northern blotting. In: Rapley R,Manning DL, eds. Methods in Molecular Biology, Vol. 86. Totowa: Humana Press Inc., pp. 77-86.
Ogunjimi AA,Chandler JM,Gooding CM,Recinos III A,Choudary PV (1999) High-level secretory expression of immunologically active intact antibody from the yeast Pichia pastoris. Biotechnol. Lett. 21: 561-567.
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Solanas, M., Moral, R. & Escrich, E. Improved non-radioactive Northern blot protocol for detecting low abundance mRNAs from mammalian tissues. Biotechnology Letters 23, 263–266 (2001). https://doi.org/10.1023/A:1005693928291
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DOI: https://doi.org/10.1023/A:1005693928291