Abstract
Principal component analysis (PCA) has been applied to a fed-batch fermentation for the production of streptokinase to identify the variables which are essential to formulate an adequate model. To mimic an industrial situation, Gaussian noise was introduced in the feed rate of the substrate. Both in the presence and in the absence of noise, the same five variables out of seven were selected by PCA. The minimal model trained separately without and with noise was able to predict satisfactorily the course of the fermentation for a condition not employed in training. These observations attest the suitability of PCA to formulate minimal models for industrial scale fermentations.
Similar content being viewed by others
References
Afifi AA, Azen SP (1979) Statistical Analysis. A Computer Oriented Approach. New York: Academic Press.
Bastin G, Dochain D (1990) On-line Estimation and Adaptive Control of Bioreactors. Amsterdam: Elsevier Science.
Cooney MJ, McDonald KA (1995) Optimum dynamic experiments for bioreactor model discrimination. Appl. Microbiol. Biotechnol. 43: 826-837.
DiMassimo C, Lant P, Saunders A, Montague GA, Tham MT, Morris AJ (1992) Bioprocess applications of model-based estimation techniques. J. Chem. Technol. Biotechnol. 53: 265-277.
Glassey J, Montague GA, Ward AC, Kara BV (1994) Enhanced supervision of recombinant E. coli fermentations via artificial neural networks. Process Biochem. 29: 387-398.
Malinowski ER (1991) Factor Analysis in Chemistry. New York: John Wiley.
Montague GA, Morris AJ, Tham MT (1992) Enhancing bioprocess operability with generic software sensors. J. Biotechnol. 25: 183-201.
Patnaik PR (1994) Fractal characterisation of the effect of noise on biological oscillations: the biosynthesis of ethanol. Biotechnol. Tech. 8: 419-424.
Patnaik PR (1995a) An evaluation of a neural network for the startup phase of a continuous recombinant fermentation subject to disturbances. Biotechnol. Tech. 9: 691-696.
Patnaik PR (1995b) Parametric sensitivity of streptokinase fermentation through model reduction by a semi-empirical approach. Hung. J. Ind. Chem. 23: 47-53.
Patnaik PR (1995c) A heuristic approach to fed-batch optimisation of streptokinase fermentation. Bioproc. Eng. 13: 109-112.
Patnaik PR (1995d) Uniqueness and multiplicity of steady states in monocyclic enzyme cascades: a graph-theoretic analysis. J. Theor. Biol. 177: 67-72.
Patnaik PR (1997a) Spectral analysis of the effect of inflow noise on a fed-batch fermentation for recombinant β-galactosidase. Bioproc. Eng. 17: 93-97.
Patnaik PR (1997b) Principal component analysis of the effect of inflow disturbances on recombinant β-galactosidase fermentation. Hung. J. Ind. Chem. 25: 261-264.
Patnaik PR (1998) Analysis of the effect of interruptions in substrate inflow on a fed-batch fermentation with recombinant bacteria. Biochem. Eng. J. 1: 121-129.
Patnaik PR (1999) Improvement of the microbial production of streptokinase by controlled filtering of process noise. Process Biochem. 35: 309-315.
Simutis R, Lubbert A (1997) Exploratory analysis of bioprocesses using artificial neural network based methods. Biotechnol. Prog. 13: 479-487.
Stuebner K, Boschke E, Wolfe K-H, Langer J (1991) Kinetic analysis and modeling of streptokinase fermentation. Acta Biotechnol. 11: 467-477.
Thibault J, van Breusegem V, Cheruy A (1990) On-line prediction of fermentation variables using neural networks. Biotechnol. Bioeng. 36: 1041-1048.
Zhang J, Martin EB, Morris AJ (1997) Process monitoring using non-linear statistical techniques. Chem. Eng. J. 67: 181-189.
Author information
Authors and Affiliations
Rights and permissions
About this article
Cite this article
Patnaik, P. Principal component analysis for minimal model identification of a noise-affected fermentation: application to streptokinase. Biotechnology Letters 22, 393–397 (2000). https://doi.org/10.1023/A:1005628819371
Issue Date:
DOI: https://doi.org/10.1023/A:1005628819371