Skip to main content
Log in

Principal component analysis for minimal model identification of a noise-affected fermentation: application to streptokinase

  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

Principal component analysis (PCA) has been applied to a fed-batch fermentation for the production of streptokinase to identify the variables which are essential to formulate an adequate model. To mimic an industrial situation, Gaussian noise was introduced in the feed rate of the substrate. Both in the presence and in the absence of noise, the same five variables out of seven were selected by PCA. The minimal model trained separately without and with noise was able to predict satisfactorily the course of the fermentation for a condition not employed in training. These observations attest the suitability of PCA to formulate minimal models for industrial scale fermentations.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Afifi AA, Azen SP (1979) Statistical Analysis. A Computer Oriented Approach. New York: Academic Press.

    Google Scholar 

  • Bastin G, Dochain D (1990) On-line Estimation and Adaptive Control of Bioreactors. Amsterdam: Elsevier Science.

    Google Scholar 

  • Cooney MJ, McDonald KA (1995) Optimum dynamic experiments for bioreactor model discrimination. Appl. Microbiol. Biotechnol. 43: 826-837.

    Google Scholar 

  • DiMassimo C, Lant P, Saunders A, Montague GA, Tham MT, Morris AJ (1992) Bioprocess applications of model-based estimation techniques. J. Chem. Technol. Biotechnol. 53: 265-277.

    Google Scholar 

  • Glassey J, Montague GA, Ward AC, Kara BV (1994) Enhanced supervision of recombinant E. coli fermentations via artificial neural networks. Process Biochem. 29: 387-398.

    Google Scholar 

  • Malinowski ER (1991) Factor Analysis in Chemistry. New York: John Wiley.

    Google Scholar 

  • Montague GA, Morris AJ, Tham MT (1992) Enhancing bioprocess operability with generic software sensors. J. Biotechnol. 25: 183-201.

    Google Scholar 

  • Patnaik PR (1994) Fractal characterisation of the effect of noise on biological oscillations: the biosynthesis of ethanol. Biotechnol. Tech. 8: 419-424.

    Google Scholar 

  • Patnaik PR (1995a) An evaluation of a neural network for the startup phase of a continuous recombinant fermentation subject to disturbances. Biotechnol. Tech. 9: 691-696.

    Google Scholar 

  • Patnaik PR (1995b) Parametric sensitivity of streptokinase fermentation through model reduction by a semi-empirical approach. Hung. J. Ind. Chem. 23: 47-53.

    Google Scholar 

  • Patnaik PR (1995c) A heuristic approach to fed-batch optimisation of streptokinase fermentation. Bioproc. Eng. 13: 109-112.

    Google Scholar 

  • Patnaik PR (1995d) Uniqueness and multiplicity of steady states in monocyclic enzyme cascades: a graph-theoretic analysis. J. Theor. Biol. 177: 67-72.

    Google Scholar 

  • Patnaik PR (1997a) Spectral analysis of the effect of inflow noise on a fed-batch fermentation for recombinant β-galactosidase. Bioproc. Eng. 17: 93-97.

    Google Scholar 

  • Patnaik PR (1997b) Principal component analysis of the effect of inflow disturbances on recombinant β-galactosidase fermentation. Hung. J. Ind. Chem. 25: 261-264.

    Google Scholar 

  • Patnaik PR (1998) Analysis of the effect of interruptions in substrate inflow on a fed-batch fermentation with recombinant bacteria. Biochem. Eng. J. 1: 121-129.

    Google Scholar 

  • Patnaik PR (1999) Improvement of the microbial production of streptokinase by controlled filtering of process noise. Process Biochem. 35: 309-315.

    Google Scholar 

  • Simutis R, Lubbert A (1997) Exploratory analysis of bioprocesses using artificial neural network based methods. Biotechnol. Prog. 13: 479-487.

    Google Scholar 

  • Stuebner K, Boschke E, Wolfe K-H, Langer J (1991) Kinetic analysis and modeling of streptokinase fermentation. Acta Biotechnol. 11: 467-477.

    Google Scholar 

  • Thibault J, van Breusegem V, Cheruy A (1990) On-line prediction of fermentation variables using neural networks. Biotechnol. Bioeng. 36: 1041-1048.

    Google Scholar 

  • Zhang J, Martin EB, Morris AJ (1997) Process monitoring using non-linear statistical techniques. Chem. Eng. J. 67: 181-189.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Patnaik, P. Principal component analysis for minimal model identification of a noise-affected fermentation: application to streptokinase. Biotechnology Letters 22, 393–397 (2000). https://doi.org/10.1023/A:1005628819371

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1005628819371

Navigation