Skip to main content
Log in

The biochemical and molecular spectrum of ornithine transcarbamylase deficiency

  • Published:
Journal of Inherited Metabolic Disease

Abstract

Ornithine transcarbamylase (OTCase) deficiency, the most commoninherited urea cycle disorder, is transmitted as an X-linked trait. The clinical phenotype in affected males as well as heterozygous females shows a spectrum of severity ranging from neonatal hyperammonaemic coma to asymptomatic adults. The ornithine transcarbamylase enzyme is a trimer with three active sites per holoenzyme molecule, each of which is composed of an interdomain region of one polypeptide and a polar domain of the adjacent polypeptide. The OTC gene is located on the short arm of the X-chromosome and one of the two alleles undergoes inactivation in female cells. Approximately 140 mutations have been found in families affected with OTCase deficiency, most having their own 'private' mutation. Large deletions of one exon or more are seen in approximately 7% of patients, small deletions or insertions are seen in about 9%, and the remaining mutations are single base substitutions. Approximately 15% of mutations affect RNA splicing sites. The recurrent mutations are distributed equally among CpG dinucleotide hot spots. Generally, mutations causing neonatal disease affect amino acid residues that are 'buried' in the interior of the enzyme, especially around the active site, while those associated with late onset and milder phenotypes tend to be located on the surface of the protein. Very few mutations have been found in the sequence of the leader peptide, proportionally much fewer than in the sequence of the mature enzyme. Only few of the mutations have been expressed in bacteria or mammalian cells for the study of their deleterious mechanisms. Examples of expressed mutations include R277W and R277Q associated with late-onset disease, which markedly increase the Km for ornithine, shift the pH optimum to more alkaline and decrease the thermal stability of the purified mutant enzyme. R141Q (neonatal disease) disrupts the active site, whereas the purified R40H mutant has normal catalytic function and this mutation is likely to affect posttranslational processing such as mitochondrial targeting. It appears that most new mutations occur in male sperm and are then passed on to a transmitting heterozygous female. Uncommonly, mild mutations are transmitted by asymptomatic males to their daughters, subsequently resulting in clinical disease of males in future generations. The causes for variable expressivity of these mutations are currently unknown but are likely to involve a combination of environmental and genetic modifiers.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

REFERENCES

  • Brusilow SW, Horwich AL (1995) Urea cycle enzymes. In Scriver R, Beaudet AL, Sly WS, Valle D, eds. The Molecular and Metabolic Bases of Inherited Disease, 7th edn. New York: McGraw-Hill, 1187-1232.

    Google Scholar 

  • Ha, Y, McCann MT, Tuchman M, Allewell NM (1997) Substrate induced conformational change in a trimeric ornithine transcarbamoylase. Proc Natl Acad Sci USA 94: 9550-9555.

    Google Scholar 

  • Honzatko RB, Crawford JL, Monaco HL, et al (1982) Crystal and molelcular structures of native and CTP ligated aspartate carbamoyltransferase from Esherichia coli. J Mol Biol 160: 219-263.

    Google Scholar 

  • Maddalena A, Edward SJ, O'Brien WE, Nussbaum RL (1988) Characterization of point mutations in the same arginine codon in three unrelated patients with ornithine trans-carbamylase deficiency. J Clin Invest 82: 1353-1358.

    Google Scholar 

  • Morizono H, Tuchman M, Rajagopal BS, et al (1997a) Expression, purification and kinetic characterization of wild type human ornithine transcarbamylase and a recurrent mutant that produces.'late onset' hyperammonemia. Biochem J 322: 625-631.

    Google Scholar 

  • Morizono H, Listrom CD, Rajagopal BS, et al (1997b) Late onset ornithine transcarbamylase deficiency: function of three purified recombinant mutant enzymes. Hum Mol Genet 6: 963-968.

    Google Scholar 

  • Morsy MA, Zhao JZ, Ngo TT, et al (1996) Patient selection may affect gene therapy success. Dominant negative effects observed for ornithine transcarbamylase in mouse and human hepatocytes. J Clin Invest 97: 826-832.

    Google Scholar 

  • Schneider TD, Stephens RM (1990) Sequence logos: a new way to display consensus sequences. Nucleic Acids Res 18: 6097-6100.

    Google Scholar 

  • Shapiro MB, Senapathy P (1987) RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression. Nucleic Acid Res 15: 7155-7175.

    Google Scholar 

  • Suess PJ, Tsai MY, Holzknecht RA, Horowitz M, Tuchman M (1992) Screening for gene deletions and known mutations in 13 patients with ornithine transcarbamylase deficiency. Biochem Med Metab Biol 47: 250-259.

    Google Scholar 

  • Tuchman M, Holzknecht RA, Gueron AB, Berry SA, Tsai MY (1992) Six new mutations in the ornithine transcarbamylase gene detected by single-strand conformation polymor-phism. Pediatr Res 32: 600-604.

    Google Scholar 

  • Tuchman M, Plante RJ, McCann MT, Qureshi AA (1994) Seven new mutations in the human ornithine transcarbamylase gene. Hum Mutat 4: 57-60.

    Google Scholar 

  • Tuchman M, Morizono H, Reish O, Yuan X, Allewell NM (1995) The molecular basis of ornithine transcarbamylase deficiency: modelling the human enzyme and the effects of mutations. J Med Genet 32: 680-688.

    Google Scholar 

  • Tuchman M, Plante RJ, Garcia-Perez MA, Rubio V (1996) Relative frequency of mutations causing ornithine transcarbamylase deficiency in 78 families. Hum Genet 97: 274-276.

    Google Scholar 

  • Villeret V, Tricot C, Stalon V, Dideberg O (1995) Crystal structure of Pseudomonas aerugin-osa catabolic ornithine transcarbamylase at resolution: a different oligomeric organization in the transcarbamoylase family. Proc Natl Acad Sci USA 92: 10762-10766.

    Google Scholar 

Download references

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tuchman, M., Morizono, H., Rajagopal, B.S. et al. The biochemical and molecular spectrum of ornithine transcarbamylase deficiency. J Inherit Metab Dis 21 (Suppl 1), 40–58 (1998). https://doi.org/10.1023/A:1005353407220

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1005353407220

Keywords

Navigation