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Rough periwinkle polymorphism on the east coast of Yorkshire: comparison of RAPD-DNA data with morphotype

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Abstract

A genetic analysis of ‘morphotypes’ of Littorina saxatilis from two locations on the north-east coast of England (Filey and Ravenscar), using randomly amplified DNA polymorphisms (RAPD) generated with a single primer, revealed quite different patterns of variation. Thin shelled, wide-apertured (H-form) animals from Ravenscar tended to cluster separately from thick shelled (M) forms, indicating genetic differentiation of these morphs. Animals of similar morphology (H and M) from Filey (about 30 km distant) did not display such an obvious pattern, and although there was still evidence of differentiation from discriminant analysis of RAPD data, levels of correct classification were reduced at Filey. This suggests that the utility of a single RAPD primer for separation of such forms varies over a relatively small distance. L. arcana from Ravenscar, included as an outgroup, were generally well differentiated from L. saxatilis and were noted to exhibit less variation, a phenomenon that has been noted previously in some allozyme and RAPD analyses. A similar RAPD analysis undertaken on small, barnacle dwelling, brooding forms from Peak Steel, Ravenscar revealed that animals appeared to have as great a tendency to cluster together on a microgeographic scale (by collection patch) as by ‘species’ ( L. neglecta or L. saxatilis b) although predominance of certain species in individual patches largely explains this. Discriminant analysis of RAPD presence/absence data did correctly place over 90% of barnacle dwelling animals to their respective species, and we consider this as evidence of separate gene pools. RAPD is taken to be a useful tool for screening genetic variation in this complex of animals on a local scale when either a pre-selected informative primer is utilised or a battery of primers is used, but its efficacy may be reduced when a single primer is employed for screening animals from different shores.

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References

  • Ashburner, M., 1989. Drosophila a laboratory manual. Cold Spring Harbor Laboratory Press, 434 pp.

  • Backeljau, T. & T. Warmoes, 1992. The phylogenetic relationships of 10 Atlantic Littorinids assessed by allozyme electrophoresis. In J. Grahame, P. J. Mill & D. G. Reid (eds), Proceedings of the Third International Symposium on Littorinid Biology. The Malacological Society of London: 9–24.

  • Bodénès, C., S. Joandet, F. Laigret & A. Kremer, 1997. Detection of genomic regions differentiating two closely related oak species Quercus petraea (Matt.) Liebl. and Quercus robur L. Heredity 78: 433–444.

    Google Scholar 

  • Caley, K. J., J. W. Grahame & P. J. Mill, 1995. A geographically based study of shell shape in small rough periwinkles. Hydrobiologia 309: 181–193.

    Google Scholar 

  • Clark, A. G. & C. M. S. Lanigan, 1993. Prospects for estimating nucleotide divergence with RAPDs. Mol. Biol. Evol. 10: 1096– 1111.

    Google Scholar 

  • Crossland, S., D. Coates, J. Grahame & P. J. Mill, 1993. Use of random amplified polymorphic DNAs (RAPDs) in separating two sibling species of Littorina. Mar. Ecol. Prog. Ser. 96: 301–305.

    Google Scholar 

  • Crossland, S., D. Coates, J. Grahame & P. J. Mill, 1996. The Littorina saxatilis species complex-interpretation using random amplified polymorphic DNAs. In J. Taylor (ed.), Origin and Evolutionary Radiation of the Mollusca. Oxford University Press: 205–209.

  • Felsenstein, J., 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle.

    Google Scholar 

  • Grahame, J., P. J. Mill, S. L. Hull & K. J. Caley, 1995. Littorina neglecta Bean: ecotype or species? J. nat. Hist. Lond. 29: 887– 899.

    Google Scholar 

  • Grahame, J., S. L. Hull, P. J. Mill & R. Hemingway, 1997. Discovering unrecognised diversity among marine molluscs. In R. F. Ormond, J. D. Gage & M. V. Angel (eds), Marine Biodiversity: Patterns and Processes. Cambridge University Press: 293–318.

  • Grosberg, R. K., D. R. Levitan & B. B. Cameron, 1996. Characterization of genetic structure and genealogies using RAPDPCR markers: a random primer for the novice and nervous. In J. D. Ferraris & S. R. Palumbi (eds), Molecular Zoology: Advances, Strategies and Protocols. Wiley-Liss: 67–100.

  • Hadrys, H., M. Balick & B. Schierwater, 1992. Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol. Ecol. 1: 55–63.

    Google Scholar 

  • Haymer, D. S., 1994. Random amplified polymorphic DNAs and microsatellites: what are they, and can they tell us anything we don't already know? Ann. ent. Soc. Am. 87: 717–722.

    Google Scholar 

  • Haymer, D. S. & D. O. McInnis, 1994. Resolution of populations of the Mediterranean fruit fly at the DNA level using random primers for the polymerase chain reaction. Genome 37: 244–248.

    Google Scholar 

  • Hull, S. L., J. W. Grahame & P. J. Mill, 1996. Morphological divergence and evidence for reproductive isolation in Littorina saxatilis (Olivi) in northeast England. J. moll. Stud. 62: 89–99.

    Google Scholar 

  • Johannesson, K. & B. Johannesson, 1990. Genetic variation with Littorina saxatilis (Olivi) and Littorina neglecta Bean: Is L. neglecta a good species? Hydrobiologia 193: 89–97.

    Google Scholar 

  • Kambhampati, S., W. C. Black IV & K. S. Rai, 1992. Random amplified polymorphic DNA of mosquito populations (Diptera: Culicidae): techniques, statistical analysis, and applications. J. med. Ent. 29: 939–945.

    Google Scholar 

  • Kimura, M. & T. Ohta, 1971. Theoretical Aspects of Population Genetics. Princeton University Press, Princeton, N.J., 219 pp.

    Google Scholar 

  • Knight, A. J. & R. D. Ward, 1986. Purine nucleoside phosphorylase polymorphism in the genus Littorina (Prosobranchia: Mollusca). Biochem. Genet. 24: 405–413.

    Google Scholar 

  • Mill, P. J. & J. W. Grahame, 1992. Clinal changes in esterase variability in Littorina saxatilis (Olivi) and L. arcana Hannaford Ellis in southern Britain. In J. Grahame, P. J. Mill & D. Reid (eds), Proceedings of the Third International Symposium on Littorinid Biology. The Malacological Society of London: 31–37.

  • Muralidharan, K. & E. K. Wakeland, 1993. Concentration of primer and template qualitatively affects products in random-amplified polymorphic DNA PCR. Biotechniques 14: 362–364.

    Google Scholar 

  • Reid, D. G., 1993. Barnacle-dwelling ecotypes of three British Littorina species and the status of Littorina neglecta Bean. J. moll. Stud. 59: 51–62.

    Google Scholar 

  • Reid, D. G., 1996. Systematics and evolution of Littorina. The Ray Society, London. 463 pp.

    Google Scholar 

  • Reid, D. G., E. Rumbak & R. H. Thomas, 1996. DNA, morphology and fossils: phylogeny and evolutionary rates of the gastropod genus Littorina. Phil. Trans. Roy. Soc. Lond. B 351: 977–895.

    Google Scholar 

  • Rumbak, E., D. G. Reid & R. H. Thomas, 1994. Reconstruction of phylogeny of 11 species of Littorina (Gastropoda: Littorinidae) using mitochondrial DNA sequence data. The Nautilus Suppl. 2: 91–97.

    Google Scholar 

  • Scheirwater, B., 1995. Arbitrarily amplified DNA in systematics and phylogenetics. Electrophoresis 16: 1643–1647.

    Google Scholar 

  • Smith, J. E., 1981. The natural history and taxonomy of shell variation in the periwinkles Littorina saxatilis and Littorina rudis. J. mar. biol. Ass. U.K. 61: 215–241.

    Google Scholar 

  • Sunberg, P., A. J. Knight, R. D. Ward & K. Johannesson, 1990. Estimating the phylogeny in the mollusc Littorina saxatilis (Olivi) from enzyme data: methodological considerations. Hydrobiologia, 193: 29–40.

    Google Scholar 

  • Ward, R. D., 1990. Biochemical genetic variation in the genus Littorina. Hydrobiologia 193: 53–69.

    Google Scholar 

  • Xu, H., D. J. Wilson, S. Arulsekar & A. T. Bakalinsky, 1995. Sequence specific polymerase chain-reaction markers derived from randomly amplified polymorphic DNA markers for fingerprinting grape (Vitis) rootstocks. J. am. hort. Soc. 120: 714–720.

    Google Scholar 

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Wilding, C.S., Grahame, J. & Mill, P.J. Rough periwinkle polymorphism on the east coast of Yorkshire: comparison of RAPD-DNA data with morphotype. Hydrobiologia 378, 71–78 (1998). https://doi.org/10.1023/A:1003229304581

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