Abstract
Mitochondrial small subunit ribosomal DNAs were sequenced and phylogenetically analyzed for Trametes and related genera of Ryvarden's Trametes group. Parsimony and distance analyses indicated that most of trimitic genera with white rotting habit of the Trametes group clustered within a single clade, suggesting that they may have originated from a common ancestor. The phylogenetic position and generic placement of Trametes consors was uncertain as yet. Trametes trogii grouped with Coriolopsis gallica and indicated that color of the basidiocarp is a poor character at generic level. Nucleotide differences between Daedaleopsis confragosa and D. tricolor were quite few and both species closely grouped together in a same clade, thus supporting that D. tricolor might be an ecotype of D. confragosa.
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References
Brans TD & Szaro TM (1992) Rate and mode differences between nuclear and mitochondrial small-subunit rRNA genes in mushrooms. Mol. Biol. Evol. 9: 836–855
Corner EJH (1932) The fruit-body of Polystictus xanthopus Fr. Ann. Botany 46: 71–111
Corner EJH (1953) The construction of polypores — 1. Introduction: Polyporus sulphureus, P. squamosus, P. betulinus and Polystictus microcyclus. Phytomorphology 3: 152–167
Corner EJH (1989) Ad Polyporaceas VI: The genus Trametes. Beih. Nova Hedwigia 97: 1–197
Felsenstein J (1993) PHYLIP (Phylogeny Inference Package). Version 3.5c. Department of Genetics SK-50, University of Washington, Seattle
Gilbertson RL & Ryvarden L (1986) North American polypores. Vol. 1. Abortiporus — Lindtneria. Fungiflora, Oslo
Gilbertson RL & Ryvarden L (1987) North American polypores. Vol. 2. Megasporoporia — Wrightoporia. Fungiflora, Oslo
Haqqi TM (1992) Direct ligation of PCR products of cloning and sequencing. Nucl. Acids Res. 20: 23
Hibbett DS (1996) Phylogenetic evidence for horizontal transmission of group I introns in the nuclear ribosomal DNA of mushroom-forming fungi. Mol. Biol. Evol. 13: 903–917
Hibbett DS & Donoghue MJ (1995) Progress toward a phylogenetic analysis of the Polyporaceae through parsimony analysis of mitochondrial ribosomal DNA sequences. Can. J. Botany 73(Suppl. 1): S853-S861
Hillis DM, Moritz C & Mable BK (1996) Molecular systematics. 2nd edition. Sinauer Associates, Inc. Publ., Sunderland
Jülich W (1981) Higher taxa of Basidiomycetes. Bibl. Mycol. 85: 1–485
Kishino H & Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J. Mol. Evol. 29: 170–179
Ko KS, Hong SG & Jung HS (1997) Phylogenetic analysis of Trichaptum based on nuclear 18S, 5.8S and ITS ribosomal DNA sequences. Mycol. 89: 727–734
Lecellier G & Silar P (1994) Rapid methods for nucleic acids extraction from petri dish-grown mycelia. Curr. Genet. 25: 122–123
Mitra A (1989) Taxonomy of Trametes consors comb. nov. Int. J. Mycol. Lichenol. 4: 23–34
Pegler DN (1996) Hyphal analysis of basidiomata. Mycol. Res. 100: 129–142
Ryvarden L (1991) Genera of polypores: Nomenclature and taxonomy. Syn. Fung. 5: 1–363
Ryvarden L & Gilbertson RL (1993) European polypores. Part 1. Abortiporus-Lindtneria. Syn. Fung. 6: 1–387
Ryvarden L & Gilbertson RL (1994) European polypores. Part 2. Meripilus-Tyromyces. Syn. Fung. 7: 388–743
Ryvarden L, Wright JE & Rajchenberg M (1982) Megasporoporia, a new genus of resupinate polypores. Mycotaxon 16: 172–182
Sanger F, Nicklen S & Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc. Nat. Acad. Sci. USA 74: 5463
Swofford DL (1993) PAUP: Phylogenetic Analysis Using Parsimony. Version 3.1.1. Illinois Natural History Survey, Champaign
Thompson JD, Higgins DG & Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucl. Acids Res. 22: 4673–1680
Traquair JA & McKeen WE (1978) Ultrastructure of the dolipore septum in Hirschioporus pergamenus (Polyporaceae). Can. J. Microbiol. 24:767–771
White TJ, Brans T, Lee S & Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ & White TJ (Eds) PCR protocols: A guide to methods and applications. Academic Press, New York
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Ko, K., Jung, H. Molecular phylogeny of Trametes and related genera. Antonie Van Leeuwenhoek 75, 191–199 (1999). https://doi.org/10.1023/A:1001732532122
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DOI: https://doi.org/10.1023/A:1001732532122