Abstract
A procedure for volume estimation based on scanning force microscopy images is applied to the study of banding-induced structural changes of chromosomes. Therefore, metaphase chromosomes were imaged before and after trypsin digestion, and the resulting three-dimensional data sets were used for a determination of the volumes of the imaged structures. The procedure is based on a histogram-based thresholding. The estimated volume is corrected for the background signal using the average background value from the histogram, so that an automated analysis of the images is possible. A first set of experimental data processed according to this approach is presented.
Similar content being viewed by others
REFERENCES
Burkhold, G. D., and Duczek, L. L. (1982). The effect of chromosome banding techniques on the proteins of isolated chromosomes. Chromosoma 87: 425-435.
Fritzsche, W. (1998). Salt-dependent chromosome viscoelasticity characterized by scanning force microscopy-based volume measurements. Microscopy Res. Tech. 44: 357-362.
Fritzsche, W., and Henderson, E. (1996). Volume determination of human metaphase chromosomes by scanning force microscopy. Scanning Microscopy 10: 103-110.
Fritzsche, W., Schaper, A., and Jovin, T. M. (1994). Probing chromatin structure with the scanning force microscope. Chromosoma 103: 231-236.
Fritzsche, W., Takac, L., and Henderson, E. (1997). Application of atomic force microscopy to visualization of DNA, chromatin and chromosomes. Crit. Rev. Eukaryotic Gene Expression 7: 231-240.
Harrison., C. J., Jack, E. M., Allen, T. D., and Harris, R. (1985). Light and scanning electron microscopy of the same human metaphase chromosomes. J. Cell Sci. 77: 143-153.
McMaster, T. J., Winfield, M., Baker, A. A., Karp, A., and Miles, M. J. (1996). Chromosome classification by AFM volume measurement. J. Vacuum Sci. Technol. B 14: 1438-1443.
Rasch, P., Wiedemann, U., Wienberg, J., and Heckl, W. M. (1993). Analysis of banded human-chromosomes and in situ hybridization patterns by scanning force microscopy. Proc. Nat. Acad. Sci. USA 90: 2509-2511.
Seabright, M. (1971). A rapid banding technique for human chromosomes. The Lancet 30: 971-972.
Xu, X., and Wu, M. (1983). Electron microscopy of G-banded human mitotic chromosomes. Chromosoma 88: 237-240.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Fritzsche, W., Augustin, R., Michel, S. et al. Trypsin-Banding Induced Volume Changes of Human Metaphase Chromosomes Analyzed by Scanning Force Microscopy. Journal of Computer-Assisted Microscopy 10, 71–76 (1998). https://doi.org/10.1023/A:1023312421502
Issue Date:
DOI: https://doi.org/10.1023/A:1023312421502