Skip to main content

Efflux pump inhibitors: new updates

Abstract

The discovery of antibiotics ought to have ended the issue of bacterial infections, but this was not the case as it has led to the evolution of various mechanisms of bacterial resistance against various antibiotics. The efflux pump remains one of the mechanisms through which organisms develop resistance against antibiotics; this is because organisms can extrude most of the clinically relevant antibiotics from the interior cell environment to the exterior environment via the efflux pumps. Efflux pumps are thought to contribute significantly to biofilm formation as highlighted by various studies. Therefore, the inhibition of these efflux pumps can be a potential way of improving the activity of antibiotics, particularly now that the discovery of novel antibiotics is becoming tedious. Efflux pump inhibitors (EPIs) are molecules that can inhibit efflux pumps; they have been considered potential therapeutic agents for rejuvenating the activity of antibiotics that have already lost their activity against bacteria. However, studies are yet to determine the specific substrates for such pumps; the effect of altered efflux activity of these pumps on biofilm formation is still being investigated. A clear knowledge of the involvement of efflux pumps in biofilm development could aid in developing new agents that can interfere with their function and help to prevent biofilms formation; thereby, improving the outcome of treatment strategies. This review focuses on the novel update of EPIs and discusses the evidence of the roles of efflux pumps in biofilm formation; the potential approaches towards overcoming the increasing problem of biofilm-based infections are also discussed.

Graphic abstract

This is a preview of subscription content, access via your institution.

Fig. 1
Fig. 2
Fig. 3

Abbreviations

EPIs:

Efflux pump inhibitors

AMR:

Antimicrobial resistance

HGT:

Horizontal gene transfer

MDR:

Multidrug resistant

EPs:

Efflux pumps

ABC:

ATP-binding cassette

CCCP:

Carbonyl cyanide m-chlorophenylhydrazine

OMF:

Outer membrane factor

NOV:

Novobiocin

ERY:

Erythromycin

aPDI:

Antimicrobial photodynamic inactivation

PS:

Photosensitive dyes

MB:

Methylene blue

EPI-MB:

Efflux pump inhibitor-methylene blue

TBO:

Toluidine blue O

PABN:

Phenylalanine-arginine β-naphthylamide

SMR:

Small multidrug resistance

MATE:

Multidrug and toxin extrusion

MFS:

Major facilitator superfamily

RND:

Resistance-nodulation division

PMF:

Proton motive force

DARPin:

Designed ankyrin repeat proteins

WT:

Wild type

OM:

Outer membrane

MPC:

The minimal potentiating concentration

Et-Br:

Ethidium bromide

EPSs:

Extracellular polymeric substances

QQ:

Quorum quenching

CR:

Carbapenem resistant

WHO:

World Health Organization

NMP:

1-(1-Napthylmethyl) piperazine

NCE:

New chemical entity

ND:

Not determined

References

  1. Shrestha P, Cooper BS, Coast J, Oppong R, Thuy NDT, Phodha T, et al. Enumerating the economic cost of antimicrobial resistance per antibiotic consumed to inform the evaluation of interventions affecting their use. Antimicrob Resist Infect Control. 2018;7(1):98.

    PubMed  PubMed Central  Article  Google Scholar 

  2. Klein EY, Van Boeckel TP, Martinez EM, Pant S, Gandra S, Levin SA, et al. Global increase and geographic convergence in antibiotic consumption between 2000 and 2015. Proc Natl Acad Sci USA. 2018;115(15):E3463–E34703470.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  3. Hicks LA, Bartoces MG, Roberts RM, Suda KJ, Hunkler RJ, Taylor TH Jr, et al. US outpatient antibiotic prescribing variation according to geography, patient population, and provider specialty in 2011. Clin Infect Dis. 2015;60(9):1308–16.

    PubMed  PubMed Central  Google Scholar 

  4. Lesho EP, Laguio-Vila M. The slow-motion catastrophe of antimicrobial resistance and practical interventions for all prescribers. Mayo Clin Proc. 2019;94(6):1040–7.

    PubMed  Article  PubMed Central  Google Scholar 

  5. Blair JM, Webber MA, Baylay AJ, Ogbolu DO, Piddock LJ. Molecular mechanisms of antibiotic resistance. Nat Rev Microbiol. 2015;13(1):42–51.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  6. Wright GD. The antibiotic resistome: the nexus of chemical and genetic diversity. Nat Rev Microbiol. 2007;5(3):175–86.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  7. Dzidic S, Bedeković V. Horizontal gene transfer-emerging multidrug resistance in hospital bacteria. Acta Pharmacol Sin. 2003;24(6):519–26.

    CAS  PubMed  PubMed Central  Google Scholar 

  8. Høiby N, Bjarnsholt T, Givskov M, Molin S, Ciofu O. Antibiotic resistance of bacterial biofilms. Int J Antimicrob Agents. 2010;35(4):322–32.

    PubMed  Article  CAS  PubMed Central  Google Scholar 

  9. Webber M, Piddock L. The importance of efflux pumps in bacterial antibiotic resistance. J Antimicrob Chemother. 2003;51(1):9–11.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  10. Marquez B. Bacterial efflux systems and efflux pumps inhibitors. Biochimie. 2005;87(12):1137–47.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  11. Piddock LJ. Multidrug-resistance efflux pumps? Not just for resistance. Nat Rev Microbiol. 2006;4(8):629–36.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  12. Kuroda T, Tsuchiya T. Multidrug efflux transporters in the MATE family. BBA-Proteins Proteom. 2009;1794(5):763–8.

    CAS  Article  Google Scholar 

  13. Jack DL, Yang NM, Saier MH. The drug/metabolite transporter superfamily. Eur J Biochem. 2001;268(13):3620–39.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  14. Pao SS, Paulsen IT, Saier MH. Major facilitator superfamily. Microbiol Mol Biol Rev. 1998;62(1):1–34.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  15. Lubelski J, Konings WN, Driessen AJ. Distribution and physiology of ABC-type transporters contributing to multidrug resistance in bacteria. Microbiol Mol Biol Rev. 2007;71(3):463–76.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  16. Nikaido H, Takatsuka Y. Mechanisms of RND multidrug efflux pumps. Biochim Biophys Acta. 2009;1794(5):769–81.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  17. Van Bambeke F, Balzi E, Tulkens PM. Antibiotic efflux pumps. Biochem Pharmacol. 2000;60(4):457–70.

    PubMed  Article  PubMed Central  Google Scholar 

  18. Poole K. Efflux-mediated antimicrobial resistance. J Antimicrob Chemother. 2005;56(1):20–51.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  19. Poole K. Efflux pumps as antimicrobial resistance mechanisms. Ann Med. 2007;39(3):162–76.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  20. Yang S, Lopez CR, Zechiedrich EL. Quorum sensing and multidrug transporters in Escherichia coli. Proc Natl Acad Sci. 2006;103(7):2386–91.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  21. Tenaillon O, Skurnik D, Picard B, Denamur E. The population genetics of commensal Escherichia coli. Nat Rev Microbiol. 2010;8(3):207–17.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  22. Venter H, Mowla R, Ohene-Agyei T, Ma S. RND-type drug efflux pumps from Gram-negative bacteria: molecular mechanism and inhibition. Front Microbiol. 2015;6:377.

    PubMed  PubMed Central  Article  Google Scholar 

  23. Ayhan DH, Tamer YT, Akbar M, Bailey SM, Wong M, Daly SM, et al. Sequence-specific targeting of bacterial resistance genes increases antibiotic efficacy. PLoS Biol. 2016;14(9):e1002552.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  24. Mu Y, Shen Z, Jeon B, Dai L, Zhang Q. Synergistic effects of anti-CmeA and anti-CmeB peptide nucleic acids on sensitizing Campylobacter jejuni to antibiotics. Antimicrob Agents Chemother. 2013;57(9):4575–7.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  25. Lin J, Michel LO, Zhang Q. CmeABC functions as a multidrug efflux system in Campylobacter jejuni. Antimicrob Agents Chemother. 2002;46(7):2124–31.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  26. Van Bambeke F, Lee VJ. Inhibitors of bacterial efflux pumps as adjuvants in antibiotic treatments and diagnostic tools for detection of resistance by efflux. Recent Pat Antiinfect Drug Discov. 2006;1(2):157–75.

    PubMed  Article  PubMed Central  Google Scholar 

  27. Daury L, Orange F, Taveau J-C, Verchère A, Monlezun L, Gounou C, et al. Tripartite assembly of RND multidrug efflux pumps. Nat Commun. 2016;7(1):1–8.

    Article  CAS  Google Scholar 

  28. Tikhonova EB, Yamada Y, Zgurskaya HI. Sequential mechanism of assembly of multidrug efflux pump AcrAB-TolC. Chem Biol. 2011;18(4):454–63.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  29. Sennhauser G, Amstutz P, Briand C, Storchenegger O, Grütter MG. Drug export pathway of multidrug exporter AcrB revealed by DARPin inhibitors. PLoS Biol. 2006;5(1):e7.

    PubMed Central  Article  CAS  Google Scholar 

  30. Inukai M, Takeuchi M, Shimizu K, Arai M. Mechanism of action of globomycin. J Antibiot. 1978;31(11):1203–5.

    CAS  Article  Google Scholar 

  31. Malléa M, Chevalier J, Eyraud A, Pagès J-M. Inhibitors of antibiotic efflux pump in resistant Enterobacter aerogenes strains. Biochem Biophys Res Commun. 2002;293(5):1370–3.

    PubMed  Article  CAS  PubMed Central  Google Scholar 

  32. Domalaon R, Idowu T, Zhanel GG, Schweizer F. Antibiotic hybrids: the next generation of agents and adjuvants against gram-negative pathogens. Clin Microbiol Rev. 2018;31(2):e00077–e117.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  33. Yang X, Goswami S, Gorityala BK, Domalaon R, Lyu Y, Kumar A, et al. A tobramycin vector enhances synergy and efficacy of efflux pump inhibitors against multidrug-resistant Gram-negative bacteria. J Med Chem. 2017;60(9):3913–32.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  34. Yang X, Domalaon R, Lyu Y, Zhanel GG, Schweizer F. Tobramycin-linked efflux pump inhibitor conjugates synergize fluoroquinolones, rifampicin and fosfomycin against multidrug-resistant Pseudomonas aeruginosa. J Clin Med. 2018;7(7):158.

    PubMed Central  Article  CAS  Google Scholar 

  35. Zeng B, Wang H, Zou L, Zhang A, Yang X, Guan Z. Evaluation and target validation of indole derivatives as inhibitors of the AcrAB-TolC efflux pump. Biosci Biotechnol Biochem. 2010;74(11):2237–41.

    CAS  PubMed  Article  Google Scholar 

  36. Opperman TJ, Kwasny SM, Kim H-S, Nguyen ST, Houseweart C, D'Souza S, et al. Characterization of a novel pyranopyridine inhibitor of the AcrAB efflux pump of Escherichia coli. Antimicrob Agents Chemother. 2014;58(2):722–33.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  37. Sjuts H, Vargiu AV, Kwasny SM, Nguyen ST, Kim H-S, Ding X, et al. Molecular basis for inhibition of AcrB multidrug efflux pump by novel and powerful pyranopyridine derivatives. Proc Natl Acad Sci. 2016;113(13):3509–14.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  38. Abdali N, Parks JM, Haynes KM, Chaney JL, Green AT, Wolloscheck D, et al. Reviving antibiotics: efflux pump inhibitors that interact with AcrA, a membrane fusion protein of the AcrAB-TolC multidrug efflux pump. ACS Infect Dis. 2017;3(1):89–988.

    CAS  PubMed  Article  Google Scholar 

  39. Green AT, Moniruzzaman M, Cooper CJ, Walker JK, Smith JC, Parks JM, et al. Discovery of multidrug efflux pump inhibitors with a novel chemical scaffold. Biochim Biophys Acta Gen Subj. 2020;1864(6):129546.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  40. Buonerba F, Lepri S, Goracci L, Schindler BD, Seo SM, Kaatz GW, et al. Improved potency of indole-based NorA efflux pump inhibitors: from serendipity toward rational design and development. J Med Chem. 2017;60(1):517–23.

    CAS  PubMed  Article  Google Scholar 

  41. Wang D, Xie K, Zou D, Meng M, Xie M. Inhibitory effects of silybin on the efflux pump of methicillin-resistant Staphylococcus aureus. Mol Med Rep. 2018;18(1):827–33.

    CAS  PubMed  PubMed Central  Google Scholar 

  42. Costa SS, Viveiros M, Amaral L, Couto I. Multidrug efflux pumps in Staphylococcus aureus: an update. Open Microbiol J. 2013;7:59.

    PubMed  PubMed Central  Article  Google Scholar 

  43. Bhaskar BV, Babu TMC, Reddy NV, Rajendra W. Homology modeling, molecular dynamics, and virtual screening of NorA efflux pump inhibitors of Staphylococcus aureus. Drug Des Devel Ther. 2016;10:3237.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  44. Fontaine F, Hequet A, Voisin-Chiret A-S, Bouillon A, Lesnard A, Cresteil T, et al. First identification of boronic species as novel potential inhibitors of the Staphylococcus aureus NorA efflux pump. J Med Chem. 2014;57(6):2536–48.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  45. Astolfi A, Felicetti T, Iraci N, Manfroni G, Massari S, Pietrella D, et al. Pharmacophore-based repositioning of approved drugs as novel Staphylococcus aureus NorA efflux pump inhibitors. J Med Chem. 2017;60(4):1598–604.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  46. Kaatz GW, Seo SM. Inducible NorA-mediated multidrug resistance in Staphylococcus aureus. Antimicrob Agents Chemother. 1995;39(12):2650–5.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  47. Abd El-Baky RM, Sandle T, John J, Abuo-Rahma GE-DA, Hetta HF. A novel mechanism of action of ketoconazole: inhibition of the NorA efflux pump system and biofilm formation in multidrug-resistant Staphylococcus aureus. Infect Drug Resist. 2019;12:1703–18.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  48. Zimmermann S, Klinger-Strobel M, Bohnert JA, Pletz M, Löffler B, Tuchscherr L. Clinically approved drugs inhibit the Staphylococcus aureus multidrug NorA efflux pump and reduce biofilm formation. Front Microbiol. 2019;10:2762.

    PubMed  PubMed Central  Article  Google Scholar 

  49. Rath SK, Singh S, Kumar S, Wani NA, Rai R, Koul S, et al. Synthesis of amides from (E)-3-(1-chloro-3, 4-dihydronaphthalen-2-yl) acrylic acid and substituted amino acid esters as NorA efflux pump inhibitors of Staphylococcus aureus. Bioorg Med Chem. 2019;27(2):343–53.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  50. Wainwright M. Photodynamic antimicrobial chemotherapy (PACT). J Antimicrob Chemother. 1998;42(1):13–28.

    CAS  PubMed  Article  Google Scholar 

  51. Zeina B, Greenman J, Purcell WM, Das B. Killing of cutaneous microbial species by photodynamic therapy. Br J Dermatol. 2001;144(2):274–8.

    CAS  PubMed  Article  Google Scholar 

  52. Dai T, Huang YY, Hamblin MR. Photodynamic therapy for localized infections—state of the art. Photodiagnosis Photodyn Ther. 2009;6(3):170–88.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  53. Castano AP, Demidova TN, Hamblin MR. Mechanisms in photodynamic therapy: part one—photosensitizers, photochemistry and cellular localization. Photodiagnosis Photodyn Ther. 2004;1(4):279–93.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  54. Sperandio FF, Simoes A, Aranha ACC, Corrêa L, Orsini Machado de Sousa SC. Photodynamic therapy mediated by methylene blue dye in wound healing. Photomed Laser Surg. 2010;28(5):581–7.

    CAS  PubMed  Article  Google Scholar 

  55. Teow SY, Liew K, Ali SA, Khoo ASB, Peh SC. Antibacterial action of curcumin against Staphylococcus aureus: a brief review. J Trop Med. 2016;2016:2853045.

    PubMed  PubMed Central  Article  Google Scholar 

  56. Fotinos N, Convert M, Piffaretti JC, Gurny R, Lange N. Effects on gram-negative and gram-positive bacteria mediated by 5-aminolevulinic acid and 5-aminolevulinic acid derivatives. Antimicrob Agents Chemother. 2008;52(4):1366–73.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  57. Fu X, Fang Y, Yao M. Antimicrobial photodynamic therapy for methicillin resistant Staphylococcus aureus infection. BioMed Res Int. 2013;2013:159157.

    PubMed  PubMed Central  Google Scholar 

  58. Tegos GP, Masago K, Aziz F, Higginbotham A, Stermitz FR, Hamblin MR. Inhibitors of bacterial multidrug efflux pumps potentiate antimicrobial photoinactivation. Antimicrob Agents Chemother. 2008;52(9):3202–9.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  59. Rineh A, Dolla NK, Ball AR, Magana M, Bremner JB, Hamblin MR, et al. Attaching the NorA efflux pump inhibitor INF55 to methylene blue enhances antimicrobial photodynamic inactivation of methicillin-resistant Staphylococcus aureus in vitro and in vivo. ACS Infect Dis. 2017;3(10):756–66.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  60. Tegos GP, Haynes M, Strouse JJ, Khan MMT, Bologa CG, Oprea TI, et al. Microbial efflux pump inhibition: tactics and strategies. Curr Pharm Des. 2011;17(13):1291–302.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  61. Rineh A, Bremner JB, Hamblin MR, Ball AR, Tegos GP, Kelso MJ. Attaching NorA efflux pump inhibitors to methylene blue enhances antimicrobial photodynamic inactivation of Escherichia coli and Acinetobacter baumannii in vitro and in vivo. Bioorg Med Chem Lett. 2018;28(16):2736–40.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  62. Flemming H, Wingender J. The biofilm matrix. Nat Rev Microbiol. 2010;8(9):623–33.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  63. Flemming H-C, Wingender J, Szewzyk U, Steinberg P, Rice SA, Kjelleberg S. Biofilms: an emergent form of bacterial life. Nat Rev Microbiol. 2016;14(9):563.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  64. Hobley L, Harkins C, MacPhee CE, Stanley-Wall NR. Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes. FEMS Microbiol Rev. 2015;39(5):649–69.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  65. Alav I, Sutton JM, Rahman KM. Role of bacterial efflux pumps in biofilm formation. J Antimicrob Chemother. 2018;73(8):2003–200.

    CAS  PubMed  Article  Google Scholar 

  66. Tacconelli E, Magrini N, Kahlmeter G, Singh N. Global priority list of antibiotic-resistant bacteria to guide research, discovery, and development of new antibiotics. WHO. 2017;27:318–27.

    Google Scholar 

  67. Peleg AY, Seifert H, Paterson DL. Acinetobacter baumannii: emergence of a successful pathogen. Clin Microbiol Rev. 2008;21(3):538–82.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  68. Rumbo-Feal S, Gomez MJ, Gayoso C, Alvarez-Fraga L, Cabral MP, Aransay AM, et al. Whole transcriptome analysis of Acinetobacter baumannii assessed by RNA-sequencing reveals different mRNA expression profiles in biofilm compared to planktonic cells. PLoS ONE. 2013;8(8):e72968.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  69. He X, Lu F, Yuan F, Jiang D, Zhao P, Zhu J, et al. Biofilm formation caused by clinical Acinetobacter baumannii isolates is associated with overexpression of the AdeFGH efflux pump. Antimicrob Agents Chemother. 2015;59(8):4817–25.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  70. Yoon EJ, Chabane YN, Goussard S, Snesrud E, Courvalin P, Dé E, et al. Contribution of resistance–nodulation–cell division efflux systems to antibiotic resistance and biofilm formation in Acinetobacter baumannii. MBio. 2015;6(2):e00309–e315.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  71. Richmond GE, Evans LP, Anderson MJ, Wand ME, Bonney LC, Ivens A, et al. The Acinetobacter baumannii two-component system AdeRS regulates genes required for multidrug efflux, biofilm formation, and virulence in a strain-specific manner. MBio. 2016;7(2):e00430–e516.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  72. Rumbo-Feal S, Pérez A, Ramelot TA, Álvarez-Fraga L, Vallejo JA, Beceiro A, et al. Contribution of the A. baumannii A1S_0114 gene to the interaction with eukaryotic cells and virulence. Front Cell Infect Microbiol. 2017;7:108.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  73. Hamon M, Bierne H, Cossart P. Listeria monocytogenes: a multifaceted model. Nat Rev Microbiol. 2006;4(6):423–34.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  74. Pan Y, Breidt F, Kathariou S. Resistance of Listeria monocytogenes biofilms to sanitizing agents in a simulated food processing environment. Appl Environ Microbiol. 2006;72(12):7711–7.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  75. Zhu X, Long F, Chen Y, Knøchel S, She Q, Shi X. A putative ABC transporter is involved in negative regulation of biofilm formation by Listeria monocytogenes. Appl Environ Microbiol. 2008;74(24):7675–83.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  76. Zhu X, Liu W, Lametsch R, Aarestrup F, Shi C, She Q, et al. Phenotypic, proteomic, and genomic characterization of a putative ABC-transporter permease involved in Listeria monocytogenes biofilm formation. Foodborne Pathog Dis. 2011;8(4):495–501.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  77. Baugh S, Ekanayaka AS, Piddock LJ, Webber MA. Loss of or inhibition of all multidrug resistance efflux pumps of Salmonella enterica serovar Typhimurium results in impaired ability to form a biofilm. J Antimicrob Chemother. 2012;67(10):2409–17.

    CAS  PubMed  Article  Google Scholar 

  78. Chan YY, Bian HS, Tan TMC, Mattmann ME, Geske GD, Igarashi J, et al. Control of quorum sensing by a Burkholderia pseudomallei multidrug efflux pump. J Bacteriol. 2007;189(11):4320–4.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  79. Pearson JP, Van Delden C, Iglewski BH. Active efflux and diffusion are involved in transport of Pseudomonas aeruginosa cell-to-cell signals. J Bacteriol. 1999;181(4):1203–10.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  80. Gillis RJ, White KG, Choi K-H, Wagner VE, Schweizer HP, Iglewski BH. Molecular basis of azithromycin-resistant Pseudomonas aeruginosa biofilms. Antimicrob Agents Chemother. 2005;49(9):3858–67.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  81. Lamarche MG, Déziel E. MexEF-OprN efflux pump exports the Pseudomonas quinolone signal (PQS) precursor HHQ (4-hydroxy-2-heptylquinoline). PLoS ONE. 2011;6(9):e24310.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  82. Sakhtah H, Koyama L, Zhang Y, Morales DK, Fields BL, Price-Whelan A, et al. The Pseudomonas aeruginosa efflux pump MexGHI-OpmD transports a natural phenazine that controls gene expression and biofilm development. Proc Natl Acad Sci. 2016;113(25):E3538–E35473547.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  83. Zhang L, Mah TF. Involvement of a novel efflux system in biofilm-specific resistance to antibiotics. J Bacteriol. 2008;190(13):4447–52.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  84. Kvist M, Hancock V, Klemm P. Inactivation of efflux pumps abolishes bacterial biofilm formation. Appl Environ Microbiol. 2008;74(23):7376–82.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  85. Bay DC, Stremick CA, Slipski CJ, Turner RJ. Secondary multidrug efflux pump mutants alter Escherichia coli biofilm growth in the presence of cationic antimicrobial compounds. Res Microbiol. 2017;168(3):208–21.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  86. May T, Ito A, Okabe S. Induction of multidrug resistance mechanism in Escherichia coli biofilms by interplay between tetracycline and ampicillin resistance genes. Antimicrob Agents Chemother. 2009;53(11):4628–39.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  87. Sun J, Deng Z, Yan A. Bacterial multidrug efflux pumps: mechanisms, physiology and pharmacological exploitations. Biochem Biophys Res Commun. 2014;453(2):254–67.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  88. Junker LM, Peters JE, Hay AG. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Microbiology. 2006;152(8):2233–45.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  89. Beloin C, Valle J, Latour-Lambert P, Faure P, Kzreminski M, Balestrino D, et al. Global impact of mature biofilm lifestyle on Escherichia coli K-12 gene expression. Mol Microbiol. 2004;51(3):659–74.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  90. Tu Quoc PH, Genevaux P, Pajunen M, Savilahti H, Georgopoulos C, Schrenzel J, et al. Isolation and characterization of biofilm formation-defective mutants of Staphylococcus aureus. Infect Immun. 2007;75(3):1079–88.

    PubMed  Article  CAS  PubMed Central  Google Scholar 

  91. He X, Ahn J. Differential gene expression in planktonic and biofilm cells of multiple antibiotic-resistant Salmonellatyphimurium and Staphylococcus aureus. FEMS Microbiol Lett. 2011;325(2):180–8.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  92. Resch A, Rosenstein R, Nerz C, Götz F. Differential gene expression profiling of Staphylococcus aureus cultivated under biofilm and planktonic conditions. Appl Environ Microbiol. 2005;71(5):2663–766.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  93. Ikonomidis A, Tsakris A, Kanellopoulou M, Maniatis A, Pournaras S. Effect of the proton motive force inhibitor carbonyl cyanide-m-chlorophenylhydrazone (CCCP) on Pseudomonas aeruginosa biofilm development. Lett Appl Microbiol. 2008;47(4):298–302.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  94. Liu Y, Yang L, Molin S. Synergistic activities of an efflux pump inhibitor and iron chelators against Pseudomonas aeruginosa growth and biofilm formation. Antimicrob Agents Chemother. 2010;54(9):3960–3.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  95. Magesh H, Kumar A, Alam A, Sekar U. Identification of natural compounds which inhibit biofilm formation in clinical isolates of Klebsiella pneumoniae. Indian J Exp Biol. 2013;51(9):764–72.

    CAS  PubMed  PubMed Central  Google Scholar 

  96. Stavri M, Piddock LJ, Gibbons S. Bacterial efflux pump inhibitors from natural sources. J Antimicrob Chemother. 2007;59(6):1247–60.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  97. Handzlik J, Matys A, Kieć-Kononowicz K. Recent advances in multi-drug resistance (MDR) efflux pump inhibitors of Gram-positive bacteria S. aureus. Antibiotics. 2013;2(1):28–45.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  98. Gould IM, Bal AM. New antibiotic agents in the pipeline and how they can help overcome microbial resistance. Virulence. 2013;4(2):185–91.

    PubMed  PubMed Central  Article  Google Scholar 

  99. Opperman TJ, Nguyen ST. Recent advances toward a molecular mechanism of efflux pump inhibition. Front Microbiol. 2015;6:421.

    PubMed  PubMed Central  Article  Google Scholar 

  100. Citron M, McJames W. Preventing biofilm formation on implantable medical devices. Google Patents; 2012.

  101. Mahamoud A, Chevalier J, Alibert-Franco S, Kern WV, Pagès J-M. Antibiotic efflux pumps in Gram-negative bacteria: the inhibitor response strategy. J Antimicrob Chemother. 2007;59(6):1223–9.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  102. Spindler E, Hale J, Giddings T, Hancock R, Gill R. Deciphering the mode of action of the synthetic antimicrobial peptide Bac8c. Antimicrob Agents Chemother. 2011;55(4):1706–16.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  103. Strahl H, Hamoen LW. Membrane potential is important for bacterial cell division. Proc Natl Acad Sci. 2010;107(27):12281–6.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  104. Lamers RP, Cavallari JF, Burrows LL. The efflux inhibitor phenylalanine-arginine beta-naphthylamide (PAβN) permeabilizes the outer membrane of gram-negative bacteria. PLoS ONE. 2013;8(3):e60666.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  105. Chan YY, Ong YM, Chua KL. Synergistic interaction between phenothiazines and antimicrobial agents against Burkholderia pseudomallei. Antimicrob Agents Chemother. 2007;51(2):623–30.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  106. Dutta NK, Mehra S, Kaushal D. A Mycobacterium tuberculosis sigma factor network responds to cell-envelope damage by the promising anti-mycobacterial thioridazine. PLoS ONE. 2010;5(4):e10069.

    PubMed  PubMed Central  Article  CAS  Google Scholar 

  107. Bonde M, Højland DH, Kolmos HJ, Kallipolitis BH, Klitgaard JK. Thioridazine affects transcription of genes involved in cell wall biosynthesis in methicillin-resistant Staphylococcus aureus. FEMS Microbiol Lett. 2011;318(2):168–76.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  108. Fiamegos YC, Kastritis PL, Exarchou V, Han H, Bonvin AM, Vervoort J, et al. Antimicrobial and efflux pump inhibitory activity of caffeoylquinic acids from Artemisia absinthium against gram-positive pathogenic bacteria. PLoS ONE. 2011;6(4):e18127.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  109. Vargiu AV, Collu F, Schulz R, Pos KM, Zacharias M, Kleinekathöfer U, et al. Effect of the F610A mutation on substrate extrusion in the AcrB transporter: explanation and rationale by molecular dynamics simulations. J Am Chem Soc. 2011;133(28):10704–7.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  110. Chopra I, Roberts M. Tetracycline antibiotics: mode of action, applications, molecular biology, and epidemiology of bacterial resistance. Microbiol Mol Biol Rev. 2001;65(2):232–60.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  111. Li X-Z, Zhang L, Poole K. Interplay between the MexA-MexB-OprM multidrug efflux system and the outer membrane barrier in the multiple antibiotic resistance of Pseudomonas aeruginosa. J Antimicrob Chemother. 2000;45(4):433–6.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  112. Iino R, Nishino K, Noji H, Yamaguchi A, Matsumoto Y. A microfluidic device for simple and rapid evaluation of multidrug efflux pump inhibitors. Front Microbiol. 2012;3:40.

    PubMed  PubMed Central  Article  Google Scholar 

  113. Dupont M, Dé E, Chollet R, Chevalier J, Pagès J-M. Enterobacter aerogenes OmpX, a cation-selective channel mar-and osmo-regulated. FEBS Lett. 2004;569(1–3):27–30.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  114. Molnár J, Engi H, Hohmann J, Molnar P, Deli J, Wesolowska O, et al. Reversal of multidrug resistance by natural substances from plants. Curr Top Med Chem. 2010;10(17):1757–68.

    PubMed  Article  PubMed Central  Google Scholar 

  115. Banoee M, Seif S, Nazari ZE, Jafari-Fesharaki P, Shahverdi HR, Moballegh A, et al. ZnO nanoparticles enhanced antibacterial activity of ciprofloxacin against Staphylococcus aureus and Escherichia coli. J Biomed Mater Res B. 2010;93(2):557–61.

    Article  CAS  Google Scholar 

  116. Pagès J-M, Masi M, Barbe J. Inhibitors of efflux pumps in gram-negative bacteria. Trends Mol Med. 2005;11(8):382–9.

    PubMed  Article  CAS  PubMed Central  Google Scholar 

  117. Lomovskaya O, Bostian KA. Practical applications and feasibility of efflux pump inhibitors in the clinic—a vision for applied use. Biochem Pharmacol. 2006;71(7):910–8.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  118. Gandhi S, Fleet JL, Bailey DG, McArthur E, Wald R, Rehman F, et al. Calcium-channel blocker–clarithromycin drug interactions and acute kidney injury. JAMA. 2013;310(23):2544–53.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  119. Nakajima A, Sugimoto Y, Yoneyama H, Nakae T. High-level fluoroquinolone resistance in Pseudomonas aeruginosa due to interplay of the MexAB-OprM efflux pump and the DNA gyrase mutation. Microbiol Immunol. 2002;46(6):391–5.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  120. Mahmood HY, Jamshidi S, Sutton JM, Rahman KM. Current advances in developing inhibitors of bacterial multidrug efflux pumps. Curr Med Chem. 2016;23(10):1062–81.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  121. Lomovskaya O, Warren MS, Lee A, Galazzo J, Fronko R, Lee M, et al. Identification and characterization of inhibitors of multidrug resistance efflux pumps in Pseudomonas aeruginosa: novel agents for combination therapy. Antimicrob Agents Chemother. 2001;45(1):105–16.

    CAS  PubMed  PubMed Central  Article  Google Scholar 

  122. AlMatar M, Var I, Kayar B, Köksal F. Differential expression of resistant and efflux pump genes in MDR-TB Isolates. Endocr Metab Immune Disord Drug Targets. 2020;20(2):271–87.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

  123. Pfeifer H, Greenblatt D, Koch-Wester J. Clinical toxicity of reserpine in hospitalized patients: a report from the Boston Collaborative Drug Surveillance Program. Am J Med Sci. 1976;271(3):269–76.

    CAS  PubMed  Article  PubMed Central  Google Scholar 

Download references

Acknowledgements

The authors would like to thank Faculty of Industrial Sciences and Technology (FIST), Universiti Malaysia Pahang (UMP) for technical assistance for this article. Moreover, financial support from grant number (FRGS) RDU190163 is highly acknowledged and appreciated.

Author information

Affiliations

Authors

Corresponding authors

Correspondence to Manaf AlMatar or Essam A. Makky.

Ethics declarations

Conflict of interest

We declare that we have no conflict of interest.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and Permissions

About this article

Verify currency and authenticity via CrossMark

Cite this article

AlMatar, M., Albarri, O., Makky, E.A. et al. Efflux pump inhibitors: new updates. Pharmacol. Rep 73, 1–16 (2021). https://doi.org/10.1007/s43440-020-00160-9

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s43440-020-00160-9

Keywords

  • Efflux pump inhibitors
  • Antimicrobial resistance
  • Biofilm
  • Bacterial infection