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Sweet cherry, a new host of raspberry bushy dwarf virus

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Abstract

Raspberry bushy dwarf virus (RBDV) is one of the most important pathogens of raspberries worldwide. In this study, we detected RBDV from 8 out of 50 cherry samples collected from Bursa, Turkey by DAS-ELISA and/or RT-PCR. We also determined the nearly full genome sequences of RBDV RNA2 from two cherry (Prunus avium) trees. The genomes were identical and shared 87.2 to 97.2% similarity to the RBDV RNA2 sequences from Rubus spp. and grapevine isolates available in GenBank, respectively. Phylogenetic analyses of RNA2 and MP gene sequences grouped cherry sequences in a clade more closely related to the grapevine clade (75 and 86% bootstrap value) while the topology based on the CP gene resulted in three separate clusters according host plant identity. Although host-dependent differentiations were confirmed in this study, no obvious geographical differentiation was observed from phylogenetic analysis, and no recombination events were detected. RBDV is found in raspberry and blackberry in many countries, including Turkey, however, here we report the first natural RBDV infection of cherry worldwide.

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Funding

This study was supported by TUBITAK-TOVAG grant number 213O042 and the Slovenian Research Agency grant P4-0072.

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Authors and Affiliations

  1. Plant Protection Department, Agricultural Faculty, Hatay Mustafa Kemal University, Hatay, 31034, Turkey

    Kadriye Çağlayan & Mona Gazel

  2. Plant Protection Department, Faculty of Agriculture, University of Maragheh, Maragheh, Iran

    Vahid Roumi

  3. Agricultural Institute of Slovenia, Hacquetova ulica 17, Ljubljana, SI, 1000, Slovenia

    Janja Lamovsek, Aljosa Beber & Irena Mavrič Pleško

Authors
  1. Kadriye Çağlayan
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  2. Mona Gazel
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  3. Vahid Roumi
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  4. Janja Lamovsek
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  5. Aljosa Beber
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  6. Irena Mavrič Pleško
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Correspondence to Kadriye Çağlayan.

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Çağlayan, K., Gazel, M., Roumi, V. et al. Sweet cherry, a new host of raspberry bushy dwarf virus. J Plant Pathol 105, 307–311 (2023). https://doi.org/10.1007/s42161-022-01257-1

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  • DOI: https://doi.org/10.1007/s42161-022-01257-1

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