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Detecting Medicine Safety Signals Using Prescription Sequence Symmetry Analysis of a National Prescribing Data Set

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Abstract

Introduction

Medicine safety signal detection methods employed by the medicine regulator in Australia (Therapeutic Goods Administration [TGA], Department of Health) rely predominantly on analysis of spontaneous adverse event (AE) reports, sponsor notifications or information shared by international agencies. The limitations of these methods and the availability of large administrative health data sets has given rise to greater interest in the use of administrative health data to support pharmacovigilance (PV).

Objective

We explored whether prescription sequence symmetry analysis (PSSA) of Pharmaceutical Benefits Scheme (PBS) data can enhance signal detection by the TGA, using the AE, heart failure (HF) as a case study.

Methods

We applied the PSSA method to all single-ingredient medicines dispensed under the PBS between 2012 and 2016, using furosemide initiation as a proxy for new-onset HF. A signal was considered present if the lower limit of the 95% confidence interval for the adjusted sequence ratio was > 1. We excluded medicines known to cause HF, indicated for HF treatment or indicated for diseases that may contribute to HF.

Results

Of the 654 tested medicines, 26 potential new HF signals were detected by PSSA. Five signals had additional support for the possible association provided by biological plausibility, consistency and disproportionate reporting of cases of HF to the TGA and the World Health Organization; and clinical impact.

Conclusion

PSSA was able to identify potential signals for further evaluation. With the increasing availability of different administrative health data sources, the strengths and weaknesses of methods used to analyse these data for the purpose of regulatory PV should be evaluated.

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References

  1. World Health Organization. Quality Assurance and Safety of Medicines Team. Safety of medicines: a guide to detecting and reporting adverse drug reactions : why health professionals need to take action. Geneva: World Health Organization; 2002. https://apps.who.int/iris/handle/10665/67378. Accessed 20 June 2018.

  2. Arnaud M, Begaud B, Thurin N, et al. Methods for safety signal detection in healthcare databases: a literature review. Expert Opin Drug Saf. 2017;16(6):721–32.

    Article  Google Scholar 

  3. Mellish L, Karanges EA, Litchfield MJ, Schaffer AL, Blanch B, Daniels BJ, et al. The Australian Pharmaceutical Benefits Scheme data collection: a practical guide for researchers. BMC Res Notes. 2015;8:634.

    Article  Google Scholar 

  4. New Health Policy Brief: The FDA’s Sentinel Initiative. Health Affairs Blog. 2015.

  5. Coloma PM, Trifiro G, Patadia V, Sturkenboom M. Postmarketing safety surveillance. Where does signal detection using electronic health records fit into the big picture? Drug Saf. 2013;36:183–97.

    Article  Google Scholar 

  6. Patadia VK, Coloma P, Schuemie MJ, Herings R, Gini R, Mazzaglia G, et al. Using real-world healthcare data for pharmacovigilance signal detection—the experience of the EU-ADR project. Expert Rev Pharmacol. 2015;8(1):95–102.

    Article  Google Scholar 

  7. Pratt N, Roughead E. Assessment of medication safety using only dispensing data. Curr Epidemiol Rep. 2018;5(4):357–69.

    Article  Google Scholar 

  8. Roughhead EE, Chan EW, Choi NK, et al. Proton pump inhibitors and risk of clostridium difficile infection: a multi-country study using sequence symmetry analysis. Expert Opin Drug Saf. 2016;15(12):1589–95.

    Article  Google Scholar 

  9. Roughead EE, Chan EW, Choi NK, et al. Variation in association between thiazolidinediones and heart failure across ethnic groups: retrospective analysis of large healthcare claims databases in six countries. Drug Saf. 2015;38(9):823–31.

    Article  CAS  Google Scholar 

  10. Wahab IA, Pratt NL, Ellet LK, et al. Sequence symmetry analysis as a signal detection tool for potential heart failure adverse events in an administrative claims database. Drug Saf. 2016;39(4):347–54.

    Article  CAS  Google Scholar 

  11. Nishtala PS, Chyou T. Exploring New Zealand prescription data using sequence symmetry analyses for predicting adverse drug reactions. J Clin Pharm Ther. 2017;42:189–94.

    Article  CAS  Google Scholar 

  12. World Health Organization collaborating Centre for Drug Statistics Methodology. Anatomical Therapeutic Chemical Code Classification index with Defined Daily Doses 2017. 2017. https://www.whocc.no/atc_ddd_index_and_guidelines/atc_ddd_index/. Accessed 5 Dec 2017.

  13. Australian Government. Department of Health. Schedule of Pharmaceutical Benefits 2017. 2017. https://www.pbs.gov.au/publication/schedule/2017/12/2017-12-01-general-schedule.pdf. Accessed 5 Dec 2017.

  14. Wahab IA, Pratt NL, Wiese MD, et al. The validity of sequence symmetry analysis for adverse drug reaction signal detection. Pharmacoepidemiol Drug Saf. 2013;22:496–502.

    Article  Google Scholar 

  15. Tsiropoulos I, Anndersen M, Hallas J. Adverse events with use of antiepileptic drugs: a prescription and event symmetry analysis. Pharmacoepid and Drug Saf. 2009;18:483–91.

    Article  CAS  Google Scholar 

  16. Page RL, O’Bryant CL, Cheng D, et al. Drugs that may cause or exacerbate heart failure. A scientific statement from the American Health Association. Circulation. 2016;134:e32–e69.

    Article  CAS  Google Scholar 

  17. Han X, Zhou Y, Lu W. Precision cardio-oncology: understanding the cardiotoxicity of cancer therapy. NPJ Precis Oncol. 2017;1(1):31.

    Article  Google Scholar 

  18. Depetris I, et al. Fluoropyrimidine-induced cardiotoxicity. Crit Rev Oncol Hematol. 2018;124:1–10.

    Article  Google Scholar 

  19. Wahab IA, Pratt NL, Kalisch LM, et al. Sequence symmetry analysis and disproportionality analyses: what percentage of adverse drug reactions do they signal? Adv Pharmacoepidemiol Drug Saf. 2013;2(4):1000140.

    Google Scholar 

  20. Hallas J, Wang SV, Gagne JJ, Schneeweiss S, Pratt N, Pottegard A. Hypothesis-free screening of large administrative databases for unsuspected drug-outcome associations. Eur J Epidemiolo. 2018;33:545–55.

    Article  Google Scholar 

  21. Hoang T, Liu J, Roughead E, et al. Supervised signal detection for adverse drug reactions in medication dispensing data. Comput Methods Programs Biomed. 2018;161:25–38.

    Article  Google Scholar 

  22. Pottegård A, Hallas J, Wang SV, Gagne JJ. Identifying signals of interest when screening for drug-outcome associations in health care data. Br J Clin Pharmacol. 2018;84:1865–7.

    Article  Google Scholar 

  23. Page AT, Falster MO, Litchfield M, Pearson SA, Etherton-Beer C. Polypharmacy among older Australians, 2006–2017: a population-based study. Med J Aust. 2019;211:71–5.

    Article  Google Scholar 

  24. Ingrasciotta Y, Cutroneo PM, Marciano I, Giezen T, Atzeni F, Trifiro G. Safety of biologics, including biosimilars: perspectives on current status and future direction. Drug Saf. 2018;41:1013–102.

    Article  CAS  Google Scholar 

  25. Lai EC, Yan YK, Lin SJ, Hsieh CY. Use of antiepileptic drugs and risk of hypothyroidism. Pharmacoepid Drug Saf. 2013;22:1071–9.

    Article  CAS  Google Scholar 

  26. Himmel W, Kochen MM, Sorns U, et al. Drug changes at the interface between primary and secondary care. Int J Clin Pharmacol Ther. 2004;42(2):103–9.

    Article  CAS  Google Scholar 

  27. Pratt N, Andersen M, Bergman U, et al. Multi-country rapid adverse drug event assessment: the Asian Pharmacoepidemiology Network (AsPen) antipsychotic and acute hyperglycaemia study. Pharmacoepidemiol Drug Saf. 2013;22(9):915–24.

    Article  CAS  Google Scholar 

  28. Trifiro G, Sultana J, Bate A. From big data to smart data for pharmacovigilance: the role of healthcare databases and other emerging sources. Drug Saf. 2018;41:143–9.

    Article  Google Scholar 

  29. Wahab IA, Pratt NL, Kalisch LM, Roughead EE. Comparing time to adverse drug reaction signals in a spontaneous reporting database and a claims database: a case study of rofecoxib-induced myocardial infarction and rosiglitazone-induced heart failure signals in Australia. Drug Saf. 2014;37:53–64.

    Article  Google Scholar 

  30. Pacurariu AC, Straus SM, Trifiro G, Schuemie MJ, Gini R, et al. Useful interplay between spontaneous ADR reports and electronic healthcare records in signal detection. Drug Saf. 2015;38:1201–10.

    Article  Google Scholar 

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Acknowledgements

The authors thank Brigitta Osterberger at the TGA for her help in editing the manuscript.

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Authors and Affiliations

Authors

Corresponding author

Correspondence to Clare E. King.

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Author Contributions

All authors contributed to study conception and design. Data collection and analysis were performed by LT and NC, with the statistical code provided by NLP. Interpretation of the results was performed by CEK, MW, NN, ECB, NLP and LKE. The first draft of the manuscript was written by CEK and all authors commented on previous versions of the manuscript. All authors read and approved the final manuscript.

Data Availability Statement

The list of PSSA signals for furosemide initiation is provided in Appendix A in the Electronic Supplementary Materials. No additional data available. The data that support the findings of this study are available from the Australian Government Department of Health but restrictions apply to the availability of these data, and so are not publicly available.

Funding

NP was funded by a National Health and Medical Research Centre (NHMRC) Grant, Centre of Research Excellence in post-marketing surveillance of medicines and medical devices GNT 1040938 and NHMRC Project Grant GNT 1157506. LKE was supported by an NHMRC-ARC Dementia Research Development Fellowship (Grant identification number APP1101788).

Conflict of interest

All authors have no conflicts of interest that are directly relevant to the content of the manuscript.

Ethics approval

The PBS data fields used in the study were medicine item code, supply date of medicine and patient identification (ID) key. As the patient ID key was a unique data key rather than a number that can be used to re-identify individuals, the research was considered negligible risk under the National Statement on Ethical Conduct in Human Research. The project was discussed with the Department of Health Human Research Ethics Committee, but formal ethics approval was not required.

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The results of the study have not been published previously.

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Supplementary material 1 (DOCX 65 kb)

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King, C.E., Pratt, N.L., Craig, N. et al. Detecting Medicine Safety Signals Using Prescription Sequence Symmetry Analysis of a National Prescribing Data Set. Drug Saf 43, 787–795 (2020). https://doi.org/10.1007/s40264-020-00940-5

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  • DOI: https://doi.org/10.1007/s40264-020-00940-5

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