Abstract
A rapid and efficient procedure for DNA transformation is a key prerequisite for successful cloning and genomic studies. While there are efforts to develop a facile method, so far obtained efficiencies for alternative methods have been unsatisfactory (i.e. 105–106 CFU/μg plasmid) compared with conventional method (up to 108 CFU/μg plasmid). In this work, for the first time, we prepared chitosan/pDNA nanoparticles by electrospraying methods to improve transformation process. Electrospray method was used for chitosan/pDNA nanoparticles production to investigate the non-competent bacterial transformation efficiency; besides, the effect of chitosan molecular weight, N/P ratio and nanoparticle size on non-competent bacterial transformation efficiency was evaluated too. The results showed that transformation efficiency increased with decreasing the molecular weight, N/P ratio and nanoparticles size. In addition, transformation efficiency of 1.7 × 108 CFU/μg plasmid was obtained with chitosan molecular weight, N/P ratio and nanoparticles size values of 30 kDa, 1 and 125 nm. Chitosan/pDNA electrosprayed nanoparticles were produced and the effect of molecular weight, N/P and size of nanoparticles on transformation efficiency was evaluated. In total, we present a facile and rapid method for bacterial transformation, which has comparable efficiency with the common method.
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Introduction
Bacterial transformation is a process by which exogenous DNA is introduced into a cell. This process is an important step in DNA cloning, which is a fundamental component in recombinant DNA technology and some medical researches. Common methods for transforming bacterial cells with exogenous DNA are chemo-transformation (mostly, treatment with CaCl2) [1] and electroporation [2]. Other transformation methods such as laser irradiation [3], sonoporation [4], biolistic transformations [5] may also be observed in the literature. Nevertheless, these methods are complicated, expensive and damaging to cells. They also require a step of preparing competent cells which is a time consuming process [6, 7]. Therefore, providing a simple and efficient method for DNA transformation appears to be necessary.
The electrospray process, also called electrohydrodynamic atomization (EHDA), is a technique based on the application of high voltage to a metal nozzle to break a liquid which is leaving the nozzle into smaller droplets. The small droplets then fly towards a collector which is connected to earth or counter electrode [8]. Electrospray is an attractive, cost-effective and simple method for producing nano- and micro-particles that are used for drug delivery and other pharmaceutical purposes [9]. The method takes the benefits of mild conditions that are suitable for sensitive therapeutic agents like DNA [9]. Reviewing the literature, very limited reports are found about using electrospray for DNA delivery into mammalian [7] and bacterial cells [6, 7]. Yusuke Okubo et al. used electrospray to spray droplets into bacterial culture to make a mild damage on the cell surface to increase penetration of plasmid to bacteria. Their findings indicated that transformation efficiency was 104–105 cells/μg plasmid [7]. In another study, electrosprayed solution of plasmid containing gold nanoparticles (Au NPs) which were directed against bacterial cells increased transformation efficiency up to106 CFU/μg plasmid [6].
Chitosan as a polymeric carrier has received great deal of attention for delivery of biomaterials into cells, especially for gene delivery into mammalian cells [10, 11]. The polycationic polymer is an attractive gene carrier with high efficacy of gene transfer and relatively high loading capacity [12]. Previous studies have shown ability of chitosan to mediate opening of tight junctions for delivery purposes [13]. Researchers have also stated that interactions between chitosan and cell membrane may lead to denaturing membrane proteins and increase permeability of cell membrane [14].
The only works that we found on the application of electrospray for bacterial transformation showed substantially lower transformation efficiency compared with that of conventional methods such as heat shock and electroporation [6, 7]. Here in, we tried to improve delivery of PUC19 as a model gene, using electrosprayed chitosan nanoparticles by optimizing some formulation parameters to develop a rapid and yet efficient method for transformation purposes.
Materials and methods
Chitosan with different molecular weights (7,30,100,500 kDa) and 72% degree of deacetylation was purchased from Zhengzhou Sigma Chemical Co. (China). PUC19 vector (2686) was obtained from Iranian biological resource center (Iran). All other chemicals/reagents were purchased from Sigma-Aldrich (USA).
Preparation of chitosan/plasmid polyplex
Stock solutions of chitosan with different molecular weights were prepared with dissolving in 25 mM sodium acetate buffer (pH: 5.5) using ultrasound. Solutions were then diluted to obtain N/P ratios of 0.25–5.0 and filtered through 0.2 µm filters. Subsequently, 10 µl of PUC19 plasmid (5 ng/µl) was added to 90 µl of the diluted chitosan solutions. Total volume was then adjusted to 0.25 ml using deionized sterile water.
Apparatus design and experimental setup
Syringe was supplied with a programmable pump. Solution of CS/pDNA was pumped through 1 ml plastic syringe with blunt-ended 30-gauge stainless steel needle. A stable positive high voltage supplier was connected to nuzzle tip. A petri dish containing Escherichia coli was adjusted on grounded aluminum dish, 3 cm below the nozzle tip and the solution was electrosprayed with constant flow rate of 1 ml/h directly into the petri dish for transformation studies.
All devices before experiment were placed into a biosafety chamber and were treated using 70% Ethanol and UV irradiation for 30 min.
Size of nanoparticles measurement
Dynamic laser light scattering technique (Nano-Zetasizer, Malvern) equipped with the Malvern PCS software (version 1.27) was used to measure the size of the chitosan and chitosan/pDNA nanoparticles after electrospray without any dilution. Morphology of CS/pDNA nanoparticles was examined by transmission electron microscopy (TEM, Zeiss–EM10C–100 kV, Germany).
DNA concentration was determined using a Nano Drop ND-1000 Spectrophotometer (Nano-Drop Technologies, USA) and agarose gel electrophoresis.
Bacterial cultivation
Noncompetent E. coli (K12 strain) solution was spread on a 1.5% agar Luria–Bertani (LB) dish and incubated overnight at 37 °C. The plasmid/chitosan in sodium acetate buffer (25 mM, pH: 5.5) was electrosprayed at constant voltage and flow rate of 10 kV and 1 ml/h, respectively, on the cultured bacterial dish for 15 min. Then, bacterial layer on the surface of each dish was inoculated in 1 ml of LB medium and shaken at 200 rpm (37 °C) for 5 h to recover cell growth. Then, to select the transformants, cultured bacterial LB mediums were spread on 1.5% LB agar dish containing ampicillin (100 µg/ml) and incubated overnight. Apparent colonies on the antibiotic bearing culture medium, represent bacterial cells that contain the transformed plasmid, thus, were counted.
Confirmation of plasmid delivery to E. coli
Subsequent to transformation process and selecting transformants (as single colonies on LB broth containing ampicillin, as an antibiotic resistance marker), the plasmid was extracted from transformants E. coli and treated with double digesting using BamHI and NdeI to confirm the successful transformation.
Comparison with heat shock transformation method
Preparation and transformation of competent E. coli cells were performed according to a previously described method [15]. Briefly, strain grown in LB to an optical density of 0.3–0.4 at 600 nm was used to prepare competent cells. Bacterial culture was centrifuged, and heat shock competent cells were prepared by incubating the bacteria in ice-cold 100 mM CaCl2 for 20 min. After centrifugation, cells were resuspended in 100 µl of 100 mM CaCl2. All the steps were performed in ice-cold conditions. Plasmid (5 ng/µl) was added to the competent cells, and heat shock was given at 42 °C for 90 s. Cells were kept on ice for 2 min, then, shaken at 37 °C 200 rpm for 1 h after addition of fresh LB medium. Then, cultured on LBA overnight and colonies were counted.
Results and discussion
The most common methods for bacterial transformation are heat shock and electroporation, with advantage of high efficiency (up to 108 CFU/μg plasmid). However, in both methods, preparation of competent cells is a time consuming process which requires relatively tedious steps [16]. In this study, we used electrosprayed chitosan nanoparticles to develop a rapid and efficient approach compared with common methods. As shown in Fig. 1, increase in molecular weight from 7 to 100 kDa makes no significant change transformation efficiency. However, further increases make a significant decrease in the efficiency. Also, by increasing the N/P ratio, transfection efficiency decreases. Previous reports in transfection of mammalian cells indicate that high MW chitosan and high N/P ratio may form stable chitosan/DNA complexes which reduce release of DNA from the nanoparticles inside the cell, leading to lower transfection efficiency [17]. A second reason for our finding could be increase in antibacterial activity of chitosan nanoparticles as a function of increase in molecular weight [14] and N/P ratio [18]. This causes irreversible damages on cell membrane which may lead to cell death. The effect of size may also be an important phenomenon: Fig. 2 reports the effect of particle size in chitosan samples with similar molecular weight (i.e. 30 kDa) having different N/P ratios (i.e., different chitosan concentration). From the figure, by increasing N/P, generally, transformation decreases which could be due to increase in size of nanoparticles.
Overall, optimum values of 30 kDa and 1 may be suggested for the molecular weight and N/P to obtain size of 125 nm for pDNA/chitosan nanoparticles, with highest transformation efficiency (Fig. 3).
Transformation confirmation
Transformation was confirmed by restriction enzyme digestion of transformants bacterial cells extracted plasmid (Fig. 4). As no change in plasmid conformation is observed, a successful delivery of gene along with a mild process is confirmed for electrospray process.
In total, the aim of this study was to present a rapid and effective method for bacterial transformation that is an essential step in recombinant DNA technology. This method is easy and does not require preparation of competent cells, with considerable transformation efficiency achieved (1.7 × 108 CFU/μg plasmid), compared with commonly used method of heat shock. Effect of chitosan molecular weight, N/P ratio and NPs size on transformation efficiency was investigated and highest transformation efficiency was obtained at 30 kDa, 1 and 125 nm for chitosan molecular weight, N/P ratio and NPs size, respectively.
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Acknowledgement
This research has been supported by Tehran University of Medical Sciences & health Services Grant No. 93-01-87-25230.
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Abyadeh, M., Sadroddiny, E., Ebrahimi, A. et al. Electrosprayed chitosan nanoparticles: facile and efficient approach for bacterial transformation. Int Nano Lett 7, 291–295 (2017). https://doi.org/10.1007/s40089-017-0224-0
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DOI: https://doi.org/10.1007/s40089-017-0224-0